| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is msrA [H]
Identifier: 77459003
GI number: 77459003
Start: 3202581
End: 3203048
Strand: Reverse
Name: msrA [H]
Synonym: Pfl01_2778
Alternate gene names: 77459003
Gene position: 3203048-3202581 (Counterclockwise)
Preceding gene: 77459004
Following gene: 77459001
Centisome position: 49.75
GC content: 59.83
Gene sequence:
>468_bases ATGAGTGATTTTCCAGGCGACGTTCTGTCAGAGCAGGCGACATTCGGTGCCGGCTGTTTCTGGGGGGCGGAAGCCTCATT CCGGGCATTGCCGGGTGTGCTCGACACCCGTGTCGGGTTCGCGCGGTCAGACTTGGGCGACGCCACCCTGATCGAAGTCG TGCAAGTCGACTTCGACCCCCGACTCATTTCCTACAGCCGTCTCGTCGAGCACTTCTGGACACTGCACGATCCAACGTCA GTCGACCGGCAGGGTGCGGACGTCGGGGCGAAATACCGTTCCGCGCTGTTTTTCAACAGTGCCGAGCAGTCCCGACTGGC ACTTGTCGCCAGGCAGCAGCTGGACGCCAGTGGCCAGTTGGGCAAGCCAGTGGCTACGGTGATCCTGCCACTGGGTGAGT TTCAAAAGGCAAATGAAGAACATCAGCGCTACCTTGAAAAGCATGGTGGCAGCGCCTGTTCCATTTGA
Upstream 100 bases:
>100_bases GCAGGGGCCAGCATTGTCGGCGGATGCTGTGGGATCGGCCCGGAGCATATCGCCCAGTTGCATTTGCACCTGCACTATCA AAAGGGTGAGGAGGCCGCGC
Downstream 100 bases:
>100_bases TGCATAGGCAACGCTTTTGCCGCCTGGGCCGGGGCGTTGCAATTGCTCGGCGAGGTACTGGTCGCGGGGACGCGGATCGA TCTGCGGAAAAGGTGCCGTT
Product: protein-methionine-S-oxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSDFPGDVLSEQATFGAGCFWGAEASFRALPGVLDTRVGFARSDLGDATLIEVVQVDFDPRLISYSRLVEHFWTLHDPTS VDRQGADVGAKYRSALFFNSAEQSRLALVARQQLDASGQLGKPVATVILPLGEFQKANEEHQRYLEKHGGSACSI
Sequences:
>Translated_155_residues MSDFPGDVLSEQATFGAGCFWGAEASFRALPGVLDTRVGFARSDLGDATLIEVVQVDFDPRLISYSRLVEHFWTLHDPTS VDRQGADVGAKYRSALFFNSAEQSRLALVARQQLDASGQLGKPVATVILPLGEFQKANEEHQRYLEKHGGSACSI >Mature_154_residues SDFPGDVLSEQATFGAGCFWGAEASFRALPGVLDTRVGFARSDLGDATLIEVVQVDFDPRLISYSRLVEHFWTLHDPTSV DRQGADVGAKYRSALFFNSAEQSRLALVARQQLDASGQLGKPVATVILPLGEFQKANEEHQRYLEKHGGSACSI
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=159, Percent_Identity=37.7358490566038, Blast_Score=101, Evalue=3e-22, Organism=Homo sapiens, GI6912516, Length=159, Percent_Identity=37.7358490566038, Blast_Score=100, Evalue=4e-22, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=37.3831775700935, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1790665, Length=161, Percent_Identity=34.1614906832298, Blast_Score=90, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=33.0985915492958, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6320881, Length=159, Percent_Identity=34.5911949685535, Blast_Score=98, Evalue=5e-22, Organism=Drosophila melanogaster, GI24664631, Length=155, Percent_Identity=34.1935483870968, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI24664627, Length=161, Percent_Identity=34.7826086956522, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI45553131, Length=150, Percent_Identity=34, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 16903; Mature: 16772
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFPGDVLSEQATFGAGCFWGAEASFRALPGVLDTRVGFARSDLGDATLIEVVQVDFDP CCCCCCHHHHHCCCCCCCEEECCCCCHHHCCCHHHHHHCHHHCCCCCHHHHHHHHCCCCC RLISYSRLVEHFWTLHDPTSVDRQGADVGAKYRSALFFNSAEQSRLALVARQQLDASGQL CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC GKPVATVILPLGEFQKANEEHQRYLEKHGGSACSI CCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDFPGDVLSEQATFGAGCFWGAEASFRALPGVLDTRVGFARSDLGDATLIEVVQVDFDP CCCCCHHHHHCCCCCCCEEECCCCCHHHCCCHHHHHHCHHHCCCCCHHHHHHHHCCCCC RLISYSRLVEHFWTLHDPTSVDRQGADVGAKYRSALFFNSAEQSRLALVARQQLDASGQL CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC GKPVATVILPLGEFQKANEEHQRYLEKHGGSACSI CCCHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]