| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is b4286 [C]
Identifier: 77458991
GI number: 77458991
Start: 3191999
End: 3192733
Strand: Reverse
Name: b4286 [C]
Synonym: Pfl01_2766
Alternate gene names: 77458991
Gene position: 3192733-3191999 (Counterclockwise)
Preceding gene: 77458992
Following gene: 77458990
Centisome position: 49.59
GC content: 54.29
Gene sequence:
>735_bases ATGAAAATCGGAATTATTGGCGCAGGTAACATTGGCTCTACTTTGGCCCGAAAGCTCGCTGCATGTGGACACGAAGTTAA ACTGGCGAATTCGAAAGGCCCTCAGAGCATTCAAAGCCTTGCCAATGAAATCGGCGTGCATGCGGTGACCAGGGAAGAAG CGGTTTCCGGGGTAGAGGTGATTATCCTCTCGATTCCCTTTGCAAATTATCCTGATCTCGAACCGATCATGAGCAAGGTG CCGGAGAAGACAGTTGTCATTGATACATCAAATTATTATCCGGGGCGTGACGGGGTAATCAAGGAGGTCGAAGATGGCAT GCCAGAAAGCATCTGGGTAAGTGAGCAGATTGGCCACCCGGTTGTTAAGGCGTGGAACGCCGTCCTCGCCGCGACCCTCG CAGACAAAGGTCAGCCGGTCGGCTCCCCAACGCGCCTCGCCATACCTGTGGCTGGAGGAAACACATACGCGGAAACCATC GCGCAGGATCTTGTTGAGGATACTGGCTTTATCGCGCTTGCCGCTGGCAGCCTTGAAGAATCGTGGCGCCAGCAACCAGG TACACCAGCGTACTGTACCGAATTGACATTGCCGGAATTGAAATTGGCGCTGAACGCGGCAGACAAGGTACGGGCGCCTC AAAACCGCGACGCACTGATCGCCAGGTTTATGGCTCCCGGGAGTCAGTTTACGCACGAGCAAATAGTTGCCACCAATCGT GCCATGACAGCCTGA
Upstream 100 bases:
>100_bases GTGTTTTTTCTGATGGTGCTTGATAGTCGAATACAAACCAATCAAACAGTACTCGGCCAGAACTTTTTTCAATTTCACAT GAGTGCGAGGAGTTATTTAA
Downstream 100 bases:
>100_bases GCGGGTTTCTTCCAATGCCATGCCCCGTACGCCAATTCTCTATGCTGCACTAATGCTTAGGCTATTTGGCACTTCAGACG GATAGGTTGAACTGTTGTTT
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKIGIIGAGNIGSTLARKLAACGHEVKLANSKGPQSIQSLANEIGVHAVTREEAVSGVEVIILSIPFANYPDLEPIMSKV PEKTVVIDTSNYYPGRDGVIKEVEDGMPESIWVSEQIGHPVVKAWNAVLAATLADKGQPVGSPTRLAIPVAGGNTYAETI AQDLVEDTGFIALAAGSLEESWRQQPGTPAYCTELTLPELKLALNAADKVRAPQNRDALIARFMAPGSQFTHEQIVATNR AMTA
Sequences:
>Translated_244_residues MKIGIIGAGNIGSTLARKLAACGHEVKLANSKGPQSIQSLANEIGVHAVTREEAVSGVEVIILSIPFANYPDLEPIMSKV PEKTVVIDTSNYYPGRDGVIKEVEDGMPESIWVSEQIGHPVVKAWNAVLAATLADKGQPVGSPTRLAIPVAGGNTYAETI AQDLVEDTGFIALAAGSLEESWRQQPGTPAYCTELTLPELKLALNAADKVRAPQNRDALIARFMAPGSQFTHEQIVATNR AMTA >Mature_244_residues MKIGIIGAGNIGSTLARKLAACGHEVKLANSKGPQSIQSLANEIGVHAVTREEAVSGVEVIILSIPFANYPDLEPIMSKV PEKTVVIDTSNYYPGRDGVIKEVEDGMPESIWVSEQIGHPVVKAWNAVLAATLADKGQPVGSPTRLAIPVAGGNTYAETI AQDLVEDTGFIALAAGSLEESWRQQPGTPAYCTELTLPELKLALNAADKVRAPQNRDALIARFMAPGSQFTHEQIVATNR AMTA
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25865; Mature: 25865
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGAGNIGSTLARKLAACGHEVKLANSKGPQSIQSLANEIGVHAVTREEAVSGVEV CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCEEECHHHHHCCEEE IILSIPFANYPDLEPIMSKVPEKTVVIDTSNYYPGRDGVIKEVEDGMPESIWVSEQIGHP EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEHHHHCCH VVKAWNAVLAATLADKGQPVGSPTRLAIPVAGGNTYAETIAQDLVEDTGFIALAAGSLEE HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHH SWRQQPGTPAYCTELTLPELKLALNAADKVRAPQNRDALIARFMAPGSQFTHEQIVATNR HHHHCCCCCCCEEECCCHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCH AMTA HCCC >Mature Secondary Structure MKIGIIGAGNIGSTLARKLAACGHEVKLANSKGPQSIQSLANEIGVHAVTREEAVSGVEV CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCEEECHHHHHCCEEE IILSIPFANYPDLEPIMSKVPEKTVVIDTSNYYPGRDGVIKEVEDGMPESIWVSEQIGHP EEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEHHHHCCH VVKAWNAVLAATLADKGQPVGSPTRLAIPVAGGNTYAETIAQDLVEDTGFIALAAGSLEE HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHH SWRQQPGTPAYCTELTLPELKLALNAADKVRAPQNRDALIARFMAPGSQFTHEQIVATNR HHHHCCCCCCCEEECCCHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCH AMTA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]