| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is b4286 [C]
Identifier: 77458992
GI number: 77458992
Start: 3192955
End: 3193701
Strand: Reverse
Name: b4286 [C]
Synonym: Pfl01_2767
Alternate gene names: 77458992
Gene position: 3193701-3192955 (Counterclockwise)
Preceding gene: 77458993
Following gene: 77458991
Centisome position: 49.6
GC content: 52.88
Gene sequence:
>747_bases ATGAACGTCGGAATTATCGGTAGCGGATTTATCGGGGGAACGCTTGCAAGACTGCTAAGCACTGCTGGCCATACAGTAAG AGTTTCAAATTCACGCGGGCCGCATACAATTGATCCTGACGTGCTCTCCACGGGTGCAATTGCAGTCACGAAAGAAGAGG CTTTGGTGGGTGCTGACGTCGTAATTCTCTCGATACCTTTTGTACGAATTCCAGATCTTAAAGCGCTTCTCGAAGGCCTT CCTGAAGACAGCGTGATCATCGACACATCCAACTATATACCTGCGCGGGACGATCGATTGGATGCAATCGAGAATGGGCA GCCCGACAGTGTATGGGCATCCGAACAAGTTGGCCGTCCCCTCGCAAAAGCCTGGAATACAATTTACTCCGCCTCGCTAA ATGAAGCTGGCAGGCCAGCTGGCGATCCGGAGCGCATTGCCGTCCCTGTCGCGGCTGATCGTGATCATGACCGCGTTGTG ACAATGGCACTCGTCGAGGATTCCGGATTCGACGCCTACTATGCTGGTTCGTTGGCTGAATCCTGGAAGCAACAGTGCGG CACGCCCTGCTATTGCACTGAGGTGACGCTTGAGTCTCTGCCCCAGGCACTGGCTGACGCGGATCTGGCGCGCTCGCGAA AGCGCCAAGATCTCTTCTTTTCGGTATATAACGAGAGATTCGGCAATATTGGAACAAACCCAAGCCGCAACTACATTGTT CAGCTTTCCAAGCTAATTTATGCGTGA
Upstream 100 bases:
>100_bases GATGCATTTGTAGAACAGATCGTGTAGGGAGAGGCTCTGTTTGTTAGCACTCGCTGAGGCTTATGTTGTGAACATCCAGC TCCAAAGATGAGGAATCTCT
Downstream 100 bases:
>100_bases GCTCGTTATGATGACACATGGATGACGATCTGCAAGGTCGCCATGCATATCAAGTTTCTAAATCATTATGCAGACTAACA ATGTCTCAGGCGCATATGCT
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNVGIIGSGFIGGTLARLLSTAGHTVRVSNSRGPHTIDPDVLSTGAIAVTKEEALVGADVVILSIPFVRIPDLKALLEGL PEDSVIIDTSNYIPARDDRLDAIENGQPDSVWASEQVGRPLAKAWNTIYSASLNEAGRPAGDPERIAVPVAADRDHDRVV TMALVEDSGFDAYYAGSLAESWKQQCGTPCYCTEVTLESLPQALADADLARSRKRQDLFFSVYNERFGNIGTNPSRNYIV QLSKLIYA
Sequences:
>Translated_248_residues MNVGIIGSGFIGGTLARLLSTAGHTVRVSNSRGPHTIDPDVLSTGAIAVTKEEALVGADVVILSIPFVRIPDLKALLEGL PEDSVIIDTSNYIPARDDRLDAIENGQPDSVWASEQVGRPLAKAWNTIYSASLNEAGRPAGDPERIAVPVAADRDHDRVV TMALVEDSGFDAYYAGSLAESWKQQCGTPCYCTEVTLESLPQALADADLARSRKRQDLFFSVYNERFGNIGTNPSRNYIV QLSKLIYA >Mature_248_residues MNVGIIGSGFIGGTLARLLSTAGHTVRVSNSRGPHTIDPDVLSTGAIAVTKEEALVGADVVILSIPFVRIPDLKALLEGL PEDSVIIDTSNYIPARDDRLDAIENGQPDSVWASEQVGRPLAKAWNTIYSASLNEAGRPAGDPERIAVPVAADRDHDRVV TMALVEDSGFDAYYAGSLAESWKQQCGTPCYCTEVTLESLPQALADADLARSRKRQDLFFSVYNERFGNIGTNPSRNYIV QLSKLIYA
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26734; Mature: 26734
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVGIIGSGFIGGTLARLLSTAGHTVRVSNSRGPHTIDPDVLSTGAIAVTKEEALVGADV CCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCEEEEECCCHHHCCCE VILSIPFVRIPDLKALLEGLPEDSVIIDTSNYIPARDDRLDAIENGQPDSVWASEQVGRP EEEECCCEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCH LAKAWNTIYSASLNEAGRPAGDPERIAVPVAADRDHDRVVTMALVEDSGFDAYYAGSLAE HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH SWKQQCGTPCYCTEVTLESLPQALADADLARSRKRQDLFFSVYNERFGNIGTNPSRNYIV HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH QLSKLIYA HHHHHHCC >Mature Secondary Structure MNVGIIGSGFIGGTLARLLSTAGHTVRVSNSRGPHTIDPDVLSTGAIAVTKEEALVGADV CCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCEEEEECCCHHHCCCE VILSIPFVRIPDLKALLEGLPEDSVIIDTSNYIPARDDRLDAIENGQPDSVWASEQVGRP EEEECCCEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCH LAKAWNTIYSASLNEAGRPAGDPERIAVPVAADRDHDRVVTMALVEDSGFDAYYAGSLAE HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH SWKQQCGTPCYCTEVTLESLPQALADADLARSRKRQDLFFSVYNERFGNIGTNPSRNYIV HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH QLSKLIYA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]