| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yegO [C]
Identifier: 77458974
GI number: 77458974
Start: 3168358
End: 3170772
Strand: Reverse
Name: yegO [C]
Synonym: Pfl01_2749
Alternate gene names: 77458974
Gene position: 3170772-3168358 (Counterclockwise)
Preceding gene: 77458975
Following gene: 77458973
Centisome position: 49.25
GC content: 57.47
Gene sequence:
>2415_bases ATGAGGCACGCCGTGAATAGTTCTCTGAAAATGAAGGAAACCAAAGTGCGCGGTGTATTGCCGCGCATCGAACAGTGGTT GTTCACTCATCGCCTACTGACGTTGTTGAGTTTGGCGGTGTTCACAGCGGGCATGGCCTGGTTTGCCGTCCAGTTACGCA TGGAAGCAGGATTTGAAAAGCAGCTACCCATTGGCCACGAGTACATCTCAACCTTTGAGACGTATCGCAACGACTTGCTC GGTGCGAACCGGCTGACCGTGGTGGTAAAGGCTCGTCAGGGGACGATCTGGAGCCAGGCAGGGCTCAAGCGCCTTTATGA CGTCACTCAGGCGCTGATTTTCCTGCCGAACGTATCGCGCAGCAGTGTGCGTTCGTTGTGGACGCCCAACGCGTTCGTCA ACGAAATCACCGAAGAAGGTTTTCGTGCCGATCCGCTGGTGCCGGGTACGGTGACGCCCGAAAGTCTCGATGGAACGAGC ATTGCGATGATCGCCAACTCGACGGCGCAGGGTGGCTTTATCGGAACGCTGGTCGCTCGCGACCAAAGCAGCGCAATGAT CACTGTCGATCTCAACGAATTCGATGCTGACGGCCAGCGCCTCGACTATGTGGCCTACAACCATGTGCTTGAGGAGAAAA TTCGCAATCAGTTCGAGGACAAGGACTTCGAGATCCAAATCATCGGTTTCGCCAAGCAGATCGGTGACATTGCGGTAGGT GCCTCGGCGGTTCTGGAGTTCTGCCTATTGGCATTGCTGCTGACGGCCGCTGCGGTGTACTGGTATTGCCATTCGCTTCG TTTCACCTTGCTGGCGGTGGGTTGCTCGCTGGTGTCACTGATCTGGCAGTTCGGCGCCTTGCGTTTGCTCGGCTATGGAC TGGATCCGCTGGCAGTGCTGGTGCCCTTTCTGGTGTTTGCCATCGGGGTCTCCCATGGCGTACAGCAAATCAACTTCATC ATTCGCGAGATCGCCTGCGGCAAGTCGGTGGAAGGAGCGGCACGCGCCAGTTTCAGCGGCTTGCTGATTCCCGGCACGCT GGCGTTAGTCACTGCATTTGTTTCGTTCGTAACGCTATTGTTGATCCCGATTCCAATGGTTCGGGAGCTGGCAATCACTG CCTCGCTCGGGGTGGCGTTCAAGATCGTCACCAACCTGGTGATGCTGCCGATCGTGGCATCAATGCTACGGGTAGATGCC GGTTACGCCGCTGCCGAGGAAATTTCTCGCCAGCGCCGGGCTCGTTGGTTACGCGGTTTTGCCCGATTGACCGAATGGCA CAACGTCCGGTGGGTGCTGGGTATGGCCGTGCTGATATTTGTCACCGCGGCCTGGCAAAGCCACGATCGGGTGGTTGGCT CCCTGCAGGCCGGGGCGCCTGAACTGCGCGAGGATGCGCGCTTCAATCGTGATGCGGTATCCATTGCCGGCAATTACGAC ATCGGGCTGGATTGGCTCAGTGTGGTCTTCGAAGCCCAAACTGACGCCGGCGCAAACGCTTGTGAAGACGTTGCCCTTGG TCAGTATCAGGATCGATTTGTATGGGCTATGCAAGGTGTACCAGGTGTGGTGTCGGTCACCTCGTTCTCTAACAGCCTGC GGCAGTTTAACGAGGGCTATAACGAGGGCAACCCGAAAATGAACGCAGTGCCCATCGACCCGACCAACTACTCGTCGATG GCCGCCGAAGTAGCTCGAGTGCCAGGGATGATGCGTCCCGATTGCAGCATGACGGCGGTGCATCTGTTCCTCGCCGATCA TAAAGCGACGACCATTCACCGAGTGATTGCCGCCGCCAAGGCATTCCGTACTCAGTTCATTCAGCCGGGCGTGAGCATAC GCCTGGCTTCCGGTAACGCTGGCGTGATTGCGGCGATCAACGAAGAGGTGGAACGCAGCGAGCTGCCCATGATGCTTTAT GTCTACGCAGCGATCGCTCTGTTGGTGTTTGTCGTCTATCGAGACTGGCGCGCGGTGTTGGTCTGCTGCCTACCGCTGAC ACTGGGCACCTTCATCGGCTACTGGTTCATGAAAGAGCTGCAAATCGGTCTGACCATCGCCACCTTGCCAGTCATGGTGC TGGCCGTCGGCATCGGCGTGGATTACGCCTTTTATATCTACAACCGTCTGCAACTGCACCAGGCTCTCGGGCAGCCAATT ACCAAAGCGGTCGAGCACGCGTTGCTGGAGGTAGGCGTCGCTACGATCTTTACCGCCATCACCTTGGCGGTGGGCGTCGC CACCTGGGCGTTTTCCGATCTTAAGTTCCAGGCCGACATGGGCAAGCTGCTGGCCTTCATGTTCCTGGTCAACATGATCA TGGCCATGACAGTTCTGCCTGCATTCGCCGTCTGGCTTGAACGAATGTTCCCACGGCGTCGTCCAGTGCGCCTGATTGGC TCACTGGTGCATTGA
Upstream 100 bases:
>100_bases AGATCTCGGCCAACTACGCCAAGTTCATGGGCGGCAAGACCCCTTACGATCAACTGCTGCGTGATCGCGATTACGTCGGC CTTGTGGTCTCCCGAACCCT
Downstream 100 bases:
>100_bases GGAGATCCCGATGCGAAATCTGATTGCTTTACTCGTTCTAATGTTATCGGCGTTATCGCAGGCTTCGCCCTTGCCGACCG TACCTGCAGCAAAAACTGCC
Product: transporter
Products: NA
Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Exporter Of RND Superfamily Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Transporter Protein; Polyketide Cyclase/Dehydrase; Exporter Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Exporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MRHAVNSSLKMKETKVRGVLPRIEQWLFTHRLLTLLSLAVFTAGMAWFAVQLRMEAGFEKQLPIGHEYISTFETYRNDLL GANRLTVVVKARQGTIWSQAGLKRLYDVTQALIFLPNVSRSSVRSLWTPNAFVNEITEEGFRADPLVPGTVTPESLDGTS IAMIANSTAQGGFIGTLVARDQSSAMITVDLNEFDADGQRLDYVAYNHVLEEKIRNQFEDKDFEIQIIGFAKQIGDIAVG ASAVLEFCLLALLLTAAAVYWYCHSLRFTLLAVGCSLVSLIWQFGALRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFI IREIACGKSVEGAARASFSGLLIPGTLALVTAFVSFVTLLLIPIPMVRELAITASLGVAFKIVTNLVMLPIVASMLRVDA GYAAAEEISRQRRARWLRGFARLTEWHNVRWVLGMAVLIFVTAAWQSHDRVVGSLQAGAPELREDARFNRDAVSIAGNYD IGLDWLSVVFEAQTDAGANACEDVALGQYQDRFVWAMQGVPGVVSVTSFSNSLRQFNEGYNEGNPKMNAVPIDPTNYSSM AAEVARVPGMMRPDCSMTAVHLFLADHKATTIHRVIAAAKAFRTQFIQPGVSIRLASGNAGVIAAINEEVERSELPMMLY VYAAIALLVFVVYRDWRAVLVCCLPLTLGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHQALGQPI TKAVEHALLEVGVATIFTAITLAVGVATWAFSDLKFQADMGKLLAFMFLVNMIMAMTVLPAFAVWLERMFPRRRPVRLIG SLVH
Sequences:
>Translated_804_residues MRHAVNSSLKMKETKVRGVLPRIEQWLFTHRLLTLLSLAVFTAGMAWFAVQLRMEAGFEKQLPIGHEYISTFETYRNDLL GANRLTVVVKARQGTIWSQAGLKRLYDVTQALIFLPNVSRSSVRSLWTPNAFVNEITEEGFRADPLVPGTVTPESLDGTS IAMIANSTAQGGFIGTLVARDQSSAMITVDLNEFDADGQRLDYVAYNHVLEEKIRNQFEDKDFEIQIIGFAKQIGDIAVG ASAVLEFCLLALLLTAAAVYWYCHSLRFTLLAVGCSLVSLIWQFGALRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFI IREIACGKSVEGAARASFSGLLIPGTLALVTAFVSFVTLLLIPIPMVRELAITASLGVAFKIVTNLVMLPIVASMLRVDA GYAAAEEISRQRRARWLRGFARLTEWHNVRWVLGMAVLIFVTAAWQSHDRVVGSLQAGAPELREDARFNRDAVSIAGNYD IGLDWLSVVFEAQTDAGANACEDVALGQYQDRFVWAMQGVPGVVSVTSFSNSLRQFNEGYNEGNPKMNAVPIDPTNYSSM AAEVARVPGMMRPDCSMTAVHLFLADHKATTIHRVIAAAKAFRTQFIQPGVSIRLASGNAGVIAAINEEVERSELPMMLY VYAAIALLVFVVYRDWRAVLVCCLPLTLGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHQALGQPI TKAVEHALLEVGVATIFTAITLAVGVATWAFSDLKFQADMGKLLAFMFLVNMIMAMTVLPAFAVWLERMFPRRRPVRLIG SLVH >Mature_804_residues MRHAVNSSLKMKETKVRGVLPRIEQWLFTHRLLTLLSLAVFTAGMAWFAVQLRMEAGFEKQLPIGHEYISTFETYRNDLL GANRLTVVVKARQGTIWSQAGLKRLYDVTQALIFLPNVSRSSVRSLWTPNAFVNEITEEGFRADPLVPGTVTPESLDGTS IAMIANSTAQGGFIGTLVARDQSSAMITVDLNEFDADGQRLDYVAYNHVLEEKIRNQFEDKDFEIQIIGFAKQIGDIAVG ASAVLEFCLLALLLTAAAVYWYCHSLRFTLLAVGCSLVSLIWQFGALRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFI IREIACGKSVEGAARASFSGLLIPGTLALVTAFVSFVTLLLIPIPMVRELAITASLGVAFKIVTNLVMLPIVASMLRVDA GYAAAEEISRQRRARWLRGFARLTEWHNVRWVLGMAVLIFVTAAWQSHDRVVGSLQAGAPELREDARFNRDAVSIAGNYD IGLDWLSVVFEAQTDAGANACEDVALGQYQDRFVWAMQGVPGVVSVTSFSNSLRQFNEGYNEGNPKMNAVPIDPTNYSSM AAEVARVPGMMRPDCSMTAVHLFLADHKATTIHRVIAAAKAFRTQFIQPGVSIRLASGNAGVIAAINEEVERSELPMMLY VYAAIALLVFVVYRDWRAVLVCCLPLTLGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHQALGQPI TKAVEHALLEVGVATIFTAITLAVGVATWAFSDLKFQADMGKLLAFMFLVNMIMAMTVLPAFAVWLERMFPRRRPVRLIG SLVH
Specific function: Could Be A Drug Efflux Pump (By Similarity). [C]
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88521; Mature: 88521
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAVNSSLKMKETKVRGVLPRIEQWLFTHRLLTLLSLAVFTAGMAWFAVQLRMEAGFEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QLPIGHEYISTFETYRNDLLGANRLTVVVKARQGTIWSQAGLKRLYDVTQALIFLPNVSR CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCH SSVRSLWTPNAFVNEITEEGFRADPLVPGTVTPESLDGTSIAMIANSTAQGGFIGTLVAR HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC DQSSAMITVDLNEFDADGQRLDYVAYNHVLEEKIRNQFEDKDFEIQIIGFAKQIGDIAVG CCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC ASAVLEFCLLALLLTAAAVYWYCHSLRFTLLAVGCSLVSLIWQFGALRLLGYGLDPLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VPFLVFAIGVSHGVQQINFIIREIACGKSVEGAARASFSGLLIPGTLALVTAFVSFVTLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHH LIPIPMVRELAITASLGVAFKIVTNLVMLPIVASMLRVDAGYAAAEEISRQRRARWLRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARLTEWHNVRWVLGMAVLIFVTAAWQSHDRVVGSLQAGAPELREDARFNRDAVSIAGNYD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCC IGLDWLSVVFEAQTDAGANACEDVALGQYQDRFVWAMQGVPGVVSVTSFSNSLRQFNEGY CCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHEEEECCCCCEEEHHHHHHHHHHHHCCC NEGNPKMNAVPIDPTNYSSMAAEVARVPGMMRPDCSMTAVHLFLADHKATTIHRVIAAAK CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH AFRTQFIQPGVSIRLASGNAGVIAAINEEVERSELPMMLYVYAAIALLVFVVYRDWRAVL HHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VCCLPLTLGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHQALGQPI HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH TKAVEHALLEVGVATIFTAITLAVGVATWAFSDLKFQADMGKLLAFMFLVNMIMAMTVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH AFAVWLERMFPRRRPVRLIGSLVH HHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MRHAVNSSLKMKETKVRGVLPRIEQWLFTHRLLTLLSLAVFTAGMAWFAVQLRMEAGFEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QLPIGHEYISTFETYRNDLLGANRLTVVVKARQGTIWSQAGLKRLYDVTQALIFLPNVSR CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCH SSVRSLWTPNAFVNEITEEGFRADPLVPGTVTPESLDGTSIAMIANSTAQGGFIGTLVAR HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC DQSSAMITVDLNEFDADGQRLDYVAYNHVLEEKIRNQFEDKDFEIQIIGFAKQIGDIAVG CCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC ASAVLEFCLLALLLTAAAVYWYCHSLRFTLLAVGCSLVSLIWQFGALRLLGYGLDPLAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VPFLVFAIGVSHGVQQINFIIREIACGKSVEGAARASFSGLLIPGTLALVTAFVSFVTLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHH LIPIPMVRELAITASLGVAFKIVTNLVMLPIVASMLRVDAGYAAAEEISRQRRARWLRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARLTEWHNVRWVLGMAVLIFVTAAWQSHDRVVGSLQAGAPELREDARFNRDAVSIAGNYD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCC IGLDWLSVVFEAQTDAGANACEDVALGQYQDRFVWAMQGVPGVVSVTSFSNSLRQFNEGY CCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHEEEECCCCCEEEHHHHHHHHHHHHCCC NEGNPKMNAVPIDPTNYSSMAAEVARVPGMMRPDCSMTAVHLFLADHKATTIHRVIAAAK CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH AFRTQFIQPGVSIRLASGNAGVIAAINEEVERSELPMMLYVYAAIALLVFVVYRDWRAVL HHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VCCLPLTLGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHQALGQPI HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHH TKAVEHALLEVGVATIFTAITLAVGVATWAFSDLKFQADMGKLLAFMFLVNMIMAMTVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHH AFAVWLERMFPRRRPVRLIGSLVH HHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA