| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458975
Identifier: 77458975
GI number: 77458975
Start: 3170769
End: 3172415
Strand: Reverse
Name: 77458975
Synonym: Pfl01_2750
Alternate gene names: NA
Gene position: 3172415-3170769 (Counterclockwise)
Preceding gene: 77458976
Following gene: 77458974
Centisome position: 49.27
GC content: 58.23
Gene sequence:
>1647_bases ATGAAAAAAATAATCAGTAAAACCTCAGGTCTTGTCATCGCGTGTGCAACCCCATTTGCCATGGCGTTCACTTTTGAAAC CGAAAACATCCGAGGCTCATTCGATTCCACTCTCGCTGTGGGCATGGGGTTACGGACCGAATCTCGCGGATGCAATCTCA TCACCAGCAGTCCAGGCGGTCACAATCCTCCCAGCGGTTGTCTGGCTCCCAGCGCCAATATTGGTGACCAGGGCGACTTG AACTACGACCGGGGGGATCTGTTCACCAACTACATAAAAGGCACCCATGAACTGGTGCTTAAATTTCCCGAGGACTACAC GTTCATGGCACGCGGGAGTTGGATACGCGACTTTGCCGCGACCGACACCAGCGGTGCGCTATCGGCCAACCGGCCTGAAG GTGTCGGGAGCGACGGCCTCACCAGCAGCGCCCGGGACGATCTGGAGTTCAAAGCGCGCCTGCTGGACCTGTGGGTGAGC AAGAGTTTCGATGTCGGTGAACAGCGTGTTCGTGCTCGTCTGGGTAATCAGGTCATCAACTGGGGCGAGAGCCTGTTCGC TGCCGGCGGCATCAACAATACCAACGCCTACGATGTCATGGCGTTGTCGCGTCCCGGCACCCAGCTCAAGGAAGCCCTGT TGCCAGCGCCGATGTTGAGCCTCGCGTCAGGGCTTGGTGCCGGCGTCAACATCGAGGCGTACTGGCAGTTCAACTGGAAC AAAAGCGAGCTGCCTCCCGTGGGCAGTTATTGGTCCACGACCCATGCACTGGGCGAGGGCAGGGGAGCTTACGGTTACGA CGAAAAGGACGCACGCAATGGAGGCCAATGGGGGGTGTCGCTGCGCTGGCAGCCTGACAACACCGATCTCAACCTCGGCC TGTACGTGATGCGTTATCACGACAAACTGCCGTCGTTGAGCATGCAGGTACTGGATCCGGAAACCTTCGCTTTGGCGCAA ACCTGGAAGTATCCGGAGGACCGCATGATGTACGGCATCAGTGCCAACATGCCGGTCGGCGACTGGGCATTGGGCACGGA GCTTTCATATCGCCCTAAGGATGCGGTGCCGCTTAATCCAGTCATCGACGCCTGTGCCAGCAACGGTGGCAAGTGCTGGA AGGATGAAAAGAAACTGCAATGGCACCTGACCGGCATTTACAGCATGACCCCGTCCAACTCGCCGACGTTGCTCGACCTC ACCGGTGCCAGCACCGGTACGCTGCTGAGCGAACTCGTGGTCGTGAAATACCCGGGGCTGCATAACGAGTACGCCGGTGA ACCGATTGCCGCCGGTCTCAATACCTGGCAACTGGATCCGTCCATCCCGCCGAGCGCCAAGGGCAACAAAACCTCTTCCG GAATCAGCCTCGATTTCAGCCTGACGTATGACAACACGCTGATCCCTGGCTGGCAGGTGACGCCGGGAGTGTTCTATTCG CAATCCATCAAGGGACGCACACCCAACCTGTCGGCGACGTTCACCGAGGATGCCAGCAGTATGAACCTGTACCTCAACTT CGTGCGCAATCCTGCGAGCTGGCAGATCTCGGCCAACTACGCCAAGTTCATGGGCGGCAAGACCCCTTACGATCAACTGC TGCGTGATCGCGATTACGTCGGCCTTGTGGTCTCCCGAACCCTATGA
Upstream 100 bases:
>100_bases CACCGATAGCGCCAACAACCCTCGTTTGAAACGCGACTTCTACACCTCAGACAATCTGCGCGCCACCAGCGAACGCTAAC AGCGGCTTTCGGGAACAGAC
Downstream 100 bases:
>100_bases GGCACGCCGTGAATAGTTCTCTGAAAATGAAGGAAACCAAAGTGCGCGGTGTATTGCCGCGCATCGAACAGTGGTTGTTC ACTCATCGCCTACTGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MKKIISKTSGLVIACATPFAMAFTFETENIRGSFDSTLAVGMGLRTESRGCNLITSSPGGHNPPSGCLAPSANIGDQGDL NYDRGDLFTNYIKGTHELVLKFPEDYTFMARGSWIRDFAATDTSGALSANRPEGVGSDGLTSSARDDLEFKARLLDLWVS KSFDVGEQRVRARLGNQVINWGESLFAAGGINNTNAYDVMALSRPGTQLKEALLPAPMLSLASGLGAGVNIEAYWQFNWN KSELPPVGSYWSTTHALGEGRGAYGYDEKDARNGGQWGVSLRWQPDNTDLNLGLYVMRYHDKLPSLSMQVLDPETFALAQ TWKYPEDRMMYGISANMPVGDWALGTELSYRPKDAVPLNPVIDACASNGGKCWKDEKKLQWHLTGIYSMTPSNSPTLLDL TGASTGTLLSELVVVKYPGLHNEYAGEPIAAGLNTWQLDPSIPPSAKGNKTSSGISLDFSLTYDNTLIPGWQVTPGVFYS QSIKGRTPNLSATFTEDASSMNLYLNFVRNPASWQISANYAKFMGGKTPYDQLLRDRDYVGLVVSRTL
Sequences:
>Translated_548_residues MKKIISKTSGLVIACATPFAMAFTFETENIRGSFDSTLAVGMGLRTESRGCNLITSSPGGHNPPSGCLAPSANIGDQGDL NYDRGDLFTNYIKGTHELVLKFPEDYTFMARGSWIRDFAATDTSGALSANRPEGVGSDGLTSSARDDLEFKARLLDLWVS KSFDVGEQRVRARLGNQVINWGESLFAAGGINNTNAYDVMALSRPGTQLKEALLPAPMLSLASGLGAGVNIEAYWQFNWN KSELPPVGSYWSTTHALGEGRGAYGYDEKDARNGGQWGVSLRWQPDNTDLNLGLYVMRYHDKLPSLSMQVLDPETFALAQ TWKYPEDRMMYGISANMPVGDWALGTELSYRPKDAVPLNPVIDACASNGGKCWKDEKKLQWHLTGIYSMTPSNSPTLLDL TGASTGTLLSELVVVKYPGLHNEYAGEPIAAGLNTWQLDPSIPPSAKGNKTSSGISLDFSLTYDNTLIPGWQVTPGVFYS QSIKGRTPNLSATFTEDASSMNLYLNFVRNPASWQISANYAKFMGGKTPYDQLLRDRDYVGLVVSRTL >Mature_548_residues MKKIISKTSGLVIACATPFAMAFTFETENIRGSFDSTLAVGMGLRTESRGCNLITSSPGGHNPPSGCLAPSANIGDQGDL NYDRGDLFTNYIKGTHELVLKFPEDYTFMARGSWIRDFAATDTSGALSANRPEGVGSDGLTSSARDDLEFKARLLDLWVS KSFDVGEQRVRARLGNQVINWGESLFAAGGINNTNAYDVMALSRPGTQLKEALLPAPMLSLASGLGAGVNIEAYWQFNWN KSELPPVGSYWSTTHALGEGRGAYGYDEKDARNGGQWGVSLRWQPDNTDLNLGLYVMRYHDKLPSLSMQVLDPETFALAQ TWKYPEDRMMYGISANMPVGDWALGTELSYRPKDAVPLNPVIDACASNGGKCWKDEKKLQWHLTGIYSMTPSNSPTLLDL TGASTGTLLSELVVVKYPGLHNEYAGEPIAAGLNTWQLDPSIPPSAKGNKTSSGISLDFSLTYDNTLIPGWQVTPGVFYS QSIKGRTPNLSATFTEDASSMNLYLNFVRNPASWQISANYAKFMGGKTPYDQLLRDRDYVGLVVSRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59748; Mature: 59748
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIISKTSGLVIACATPFAMAFTFETENIRGSFDSTLAVGMGLRTESRGCNLITSSPGG CCCHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCC HNPPSGCLAPSANIGDQGDLNYDRGDLFTNYIKGTHELVLKFPEDYTFMARGSWIRDFAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHC TDTSGALSANRPEGVGSDGLTSSARDDLEFKARLLDLWVSKSFDVGEQRVRARLGNQVIN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WGESLFAAGGINNTNAYDVMALSRPGTQLKEALLPAPMLSLASGLGAGVNIEAYWQFNWN CCCHHEEECCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCC KSELPPVGSYWSTTHALGEGRGAYGYDEKDARNGGQWGVSLRWQPDNTDLNLGLYVMRYH CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEC DKLPSLSMQVLDPETFALAQTWKYPEDRMMYGISANMPVGDWALGTELSYRPKDAVPLNP CCCCCCEEEEECCCHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH VIDACASNGGKCWKDEKKLQWHLTGIYSMTPSNSPTLLDLTGASTGTLLSELVVVKYPGL HHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHEEECCCC HNEYAGEPIAAGLNTWQLDPSIPPSAKGNKTSSGISLDFSLTYDNTLIPGWQVTPGVFYS CCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEECCCCCCCCCCEEE QSIKGRTPNLSATFTEDASSMNLYLNFVRNPASWQISANYAKFMGGKTPYDQLLRDRDYV CCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHCCCCCE GLVVSRTL EEEEEECC >Mature Secondary Structure MKKIISKTSGLVIACATPFAMAFTFETENIRGSFDSTLAVGMGLRTESRGCNLITSSPGG CCCHHCCCCCEEEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCC HNPPSGCLAPSANIGDQGDLNYDRGDLFTNYIKGTHELVLKFPEDYTFMARGSWIRDFAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHC TDTSGALSANRPEGVGSDGLTSSARDDLEFKARLLDLWVSKSFDVGEQRVRARLGNQVIN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WGESLFAAGGINNTNAYDVMALSRPGTQLKEALLPAPMLSLASGLGAGVNIEAYWQFNWN CCCHHEEECCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEECCC KSELPPVGSYWSTTHALGEGRGAYGYDEKDARNGGQWGVSLRWQPDNTDLNLGLYVMRYH CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEC DKLPSLSMQVLDPETFALAQTWKYPEDRMMYGISANMPVGDWALGTELSYRPKDAVPLNP CCCCCCEEEEECCCHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH VIDACASNGGKCWKDEKKLQWHLTGIYSMTPSNSPTLLDLTGASTGTLLSELVVVKYPGL HHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHEEECCCC HNEYAGEPIAAGLNTWQLDPSIPPSAKGNKTSSGISLDFSLTYDNTLIPGWQVTPGVFYS CCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEECCCCCCCCCCEEE QSIKGRTPNLSATFTEDASSMNLYLNFVRNPASWQISANYAKFMGGKTPYDQLLRDRDYV CCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHCCCCCE GLVVSRTL EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA