| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ordL [H]
Identifier: 77458968
GI number: 77458968
Start: 3160484
End: 3161851
Strand: Reverse
Name: ordL [H]
Synonym: Pfl01_2743
Alternate gene names: 77458968
Gene position: 3161851-3160484 (Counterclockwise)
Preceding gene: 77458969
Following gene: 77458967
Centisome position: 49.11
GC content: 60.96
Gene sequence:
>1368_bases ATGTCCATGGCCTATCAAGCACAAGAGTTGGAACGCCATTTTGCAGGCGGACATTTCCGTCGGTTGGGTGGCTGGGTCGA AAGTCCGGTTGATCTGCAGCCAGAGCTCGAAGGCGATGTAAGCGCGGACGTCATCGTGATCGGTGCCGGTTTCGCCGGGC TGTCCACCGCCCTGGAGCTTACGGCGCTGGGAGCGAAGGTCATTATCCTCGAGCAGGAGTTTGCCGGTTTCGGTGCCAGC GGTCGGAATGCCGGTTATCTGGGCGGGAGCATCGGCATTGAGTTCGAGTTGTTCCTGAAACGTGTCGGCAAGGAAAAAGC GCAAAATATCGTCAGGTTCTATGACGAAGCGGTCGCCTACGTCGAAGGTCGGTTGCGCGAACTGGGGATCGACTGCGACT ACAACGCCTCGGGCATCATCAGGGCGGGGATCCATCCGTCGCAAGAAAAGAGGCTGCGCAAAAGCATGGCCGTGGGCCAC GAATTGGGTTCGCAAACCGAGTTTCTGGATCAGGCACAAATGCGCGCGCGGGGGATTCCACCGGCCTTTCTGTTTGGCTG TCTGCAACGCCACGGCGGTACCCTGGACCCAGGCAAATACGTGATGGGCCTGCGCCGCGCTGCACTCCAGGCGGGGGTGA GGCTGTATGAAAACACCACGCTTGAGTCGTACTCCGACGGGCCGACGATCACCTGCCGGACGCCACGCGGGCGGGCGAGT GCGCCAATAGTGGTGCTGGCCACCAATGCCTATACGCCGCAACTCGGTCTTCTGCGCGACAAAGTCGTACCGTTTCGGGT TTCGGCGGTCGAAACCGAGCCATTGACACCACAGCAGTTGGCATCGCTGGGCTGGGCAGGGCGGGAAGGGTTGACCACGC CGCACCTGGTGATGGAAAGCCATCGCCTGACCGCACGCAATACGCTGCTGATGACCACCAAACGGCTGGGTTATGCCTAC GGCTCGAAAACCCCGAACATTCCCGATGAGGTGACCTACCGCGCGTTGCAAGACAACCTTGGCGTGCGTTTCCCGACGTT ACGCGGTGTCGGCATTCAAGCGTGCTGGAGTGGTTACGTCAGCATGGCCTACGACGCGTTGCCGGTGGTGGGCGAAACCG GGTCGCACCACAACATTCTCTACACCGCGGGTTGCTCCGGACACGGTGTCGCCTCGCAGTCGCTGATCGGCCATCTGCTG GCAGAAAGGATCGGCGGTATCGAGCATCCGCTGCTCGCCGCGCTGCGGCATAAAACTCCGAAAACCCTGCCCGAACCGCT GCAGTGGTGCGCCGTGAATGTGGCGCTGGAGGGAGCACATCTGCTGGACGAATACACCAACCGCAAAGTTGTGCACCCTC ATGCCTGA
Upstream 100 bases:
>100_bases ACGGCGCGCGGCATGCCATCCAGGAAAACGGTGGCGGTCTTCAAGGTGTCGAGGAAGCAGCAGTCGCTATTCACATCCTG AGTCGATAGGAGCGCATCAC
Downstream 100 bases:
>100_bases CGGTTGAGGTTATAGAACCAACACGCTGATTTTCCGTGGTGAAGCTGACCTTGGAGTCCTGGGGCCGGCAGGCGTTCGCC TGCAGAAAGACAAACGAATG
Product: fumarate reductase/succinate dehydrogenase flavoprotein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSMAYQAQELERHFAGGHFRRLGGWVESPVDLQPELEGDVSADVIVIGAGFAGLSTALELTALGAKVIILEQEFAGFGAS GRNAGYLGGSIGIEFELFLKRVGKEKAQNIVRFYDEAVAYVEGRLRELGIDCDYNASGIIRAGIHPSQEKRLRKSMAVGH ELGSQTEFLDQAQMRARGIPPAFLFGCLQRHGGTLDPGKYVMGLRRAALQAGVRLYENTTLESYSDGPTITCRTPRGRAS APIVVLATNAYTPQLGLLRDKVVPFRVSAVETEPLTPQQLASLGWAGREGLTTPHLVMESHRLTARNTLLMTTKRLGYAY GSKTPNIPDEVTYRALQDNLGVRFPTLRGVGIQACWSGYVSMAYDALPVVGETGSHHNILYTAGCSGHGVASQSLIGHLL AERIGGIEHPLLAALRHKTPKTLPEPLQWCAVNVALEGAHLLDEYTNRKVVHPHA
Sequences:
>Translated_455_residues MSMAYQAQELERHFAGGHFRRLGGWVESPVDLQPELEGDVSADVIVIGAGFAGLSTALELTALGAKVIILEQEFAGFGAS GRNAGYLGGSIGIEFELFLKRVGKEKAQNIVRFYDEAVAYVEGRLRELGIDCDYNASGIIRAGIHPSQEKRLRKSMAVGH ELGSQTEFLDQAQMRARGIPPAFLFGCLQRHGGTLDPGKYVMGLRRAALQAGVRLYENTTLESYSDGPTITCRTPRGRAS APIVVLATNAYTPQLGLLRDKVVPFRVSAVETEPLTPQQLASLGWAGREGLTTPHLVMESHRLTARNTLLMTTKRLGYAY GSKTPNIPDEVTYRALQDNLGVRFPTLRGVGIQACWSGYVSMAYDALPVVGETGSHHNILYTAGCSGHGVASQSLIGHLL AERIGGIEHPLLAALRHKTPKTLPEPLQWCAVNVALEGAHLLDEYTNRKVVHPHA >Mature_454_residues SMAYQAQELERHFAGGHFRRLGGWVESPVDLQPELEGDVSADVIVIGAGFAGLSTALELTALGAKVIILEQEFAGFGASG RNAGYLGGSIGIEFELFLKRVGKEKAQNIVRFYDEAVAYVEGRLRELGIDCDYNASGIIRAGIHPSQEKRLRKSMAVGHE LGSQTEFLDQAQMRARGIPPAFLFGCLQRHGGTLDPGKYVMGLRRAALQAGVRLYENTTLESYSDGPTITCRTPRGRASA PIVVLATNAYTPQLGLLRDKVVPFRVSAVETEPLTPQQLASLGWAGREGLTTPHLVMESHRLTARNTLLMTTKRLGYAYG SKTPNIPDEVTYRALQDNLGVRFPTLRGVGIQACWSGYVSMAYDALPVVGETGSHHNILYTAGCSGHGVASQSLIGHLLA ERIGGIEHPLLAALRHKTPKTLPEPLQWCAVNVALEGAHLLDEYTNRKVVHPHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=377, Percent_Identity=30.2387267904509, Blast_Score=138, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 49340; Mature: 49209
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMAYQAQELERHFAGGHFRRLGGWVESPVDLQPELEGDVSADVIVIGAGFAGLSTALEL CCCCHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH TALGAKVIILEQEFAGFGASGRNAGYLGGSIGIEFELFLKRVGKEKAQNIVRFYDEAVAY HHCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH VEGRLRELGIDCDYNASGIIRAGIHPSQEKRLRKSMAVGHELGSQTEFLDQAQMRARGIP HHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC PAFLFGCLQRHGGTLDPGKYVMGLRRAALQAGVRLYENTTLESYSDGPTITCRTPRGRAS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEECCCCCCC APIVVLATNAYTPQLGLLRDKVVPFRVSAVETEPLTPQQLASLGWAGREGLTTPHLVMES CCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHC HRLTARNTLLMTTKRLGYAYGSKTPNIPDEVTYRALQDNLGVRFPTLRGVGIQACWSGYV CCCHHCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH SMAYDALPVVGETGSHHNILYTAGCSGHGVASQSLIGHLLAERIGGIEHPLLAALRHKTP HHHHHCCCEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC KTLPEPLQWCAVNVALEGAHLLDEYTNRKVVHPHA CCCCHHHHHHHHHEEECCHHHHHHHHCCCEECCCC >Mature Secondary Structure SMAYQAQELERHFAGGHFRRLGGWVESPVDLQPELEGDVSADVIVIGAGFAGLSTALEL CCCHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH TALGAKVIILEQEFAGFGASGRNAGYLGGSIGIEFELFLKRVGKEKAQNIVRFYDEAVAY HHCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH VEGRLRELGIDCDYNASGIIRAGIHPSQEKRLRKSMAVGHELGSQTEFLDQAQMRARGIP HHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC PAFLFGCLQRHGGTLDPGKYVMGLRRAALQAGVRLYENTTLESYSDGPTITCRTPRGRAS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEECCCCCCC APIVVLATNAYTPQLGLLRDKVVPFRVSAVETEPLTPQQLASLGWAGREGLTTPHLVMES CCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHC HRLTARNTLLMTTKRLGYAYGSKTPNIPDEVTYRALQDNLGVRFPTLRGVGIQACWSGYV CCCHHCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH SMAYDALPVVGETGSHHNILYTAGCSGHGVASQSLIGHLLAERIGGIEHPLLAALRHKTP HHHHHCCCEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC KTLPEPLQWCAVNVALEGAHLLDEYTNRKVVHPHA CCCCHHHHHHHHHEEECCHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]