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The map label for this gene is yohC [H]

Identifier: 77458919

GI number: 77458919

Start: 3103785

End: 3104396

Strand: Reverse

Name: yohC [H]

Synonym: Pfl01_2694

Alternate gene names: 77458919

Gene position: 3104396-3103785 (Counterclockwise)

Preceding gene: 77458920

Following gene: 77458918

Centisome position: 48.22

GC content: 61.11

Gene sequence:

>612_bases
ATGTCTGCGCCTATTATCAAACTCTTCACCCAGCCGAACTTTGCCTGGACCGACATCCGCCGCGAAGAAGAGGCACATCC
GCGTCATTACCTTGCTCACCTGCTGTTGCTGGCCCTCGTCCCGGCGGTGTGCCTGTTCATTGGCACCACGTATGTCGGCT
GGAGCCTGGCGGTGGGTGAAACCGTAAGGCTCAGCAGTGCCAGCGCCTTGCAGCTGAGTGTCCTGCTCTACGTCACGATC
GTGGTCGGCGTGGCGATCATCGGCGGATTCATTCGCTGGATGTCGCGCACCTTCGATGCGCGGCCGACGCTCAACCAGTG
CATCGGTTTCGCGGCATACACCGTCACCCCGTTTTTCATCGCCGGGCTCGCTGGCCTGTATCCCAGCCGCTGGCTGGCGG
TGCTGGTGCTCGGCGCGGCGTCGATCTATTCGACGTTTCTGCTGTTCGTTGGCCTGCCGACTTTCATGCACGAGCGCAAG
GAACAGGGTTTGCTGTATTCGGCCAGCGTGTGGGGTGTCGCGCTGCTGGTGCTGGTGACGTTGTTGGTGTCGATGATTCT
GCTGTGGTTCAACGTGCTGACGCCGGAATACCTGCGCACGACTGCGGGTTAG

Upstream 100 bases:

>100_bases
GATGCTCTGAACCGCCTGCCAGAAAAAGTGAACCGCTGGACACGGCGACCTCTCCATACCTTCATGGCCCGTTCGGGTTG
CAAGAGATCAGGAGGTCGTC

Downstream 100 bases:

>100_bases
GCCGGTTATGTCGGGGCGGCATCGAACTGACCTTACAGGCCGCGCGTCATGAGCTTCATCATCTGGGTAGCGGTGCTCGG
TGCCGTGCTGCTGACCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSAPIIKLFTQPNFAWTDIRREEEAHPRHYLAHLLLLALVPAVCLFIGTTYVGWSLAVGETVRLSSASALQLSVLLYVTI
VVGVAIIGGFIRWMSRTFDARPTLNQCIGFAAYTVTPFFIAGLAGLYPSRWLAVLVLGAASIYSTFLLFVGLPTFMHERK
EQGLLYSASVWGVALLVLVTLLVSMILLWFNVLTPEYLRTTAG

Sequences:

>Translated_203_residues
MSAPIIKLFTQPNFAWTDIRREEEAHPRHYLAHLLLLALVPAVCLFIGTTYVGWSLAVGETVRLSSASALQLSVLLYVTI
VVGVAIIGGFIRWMSRTFDARPTLNQCIGFAAYTVTPFFIAGLAGLYPSRWLAVLVLGAASIYSTFLLFVGLPTFMHERK
EQGLLYSASVWGVALLVLVTLLVSMILLWFNVLTPEYLRTTAG
>Mature_202_residues
SAPIIKLFTQPNFAWTDIRREEEAHPRHYLAHLLLLALVPAVCLFIGTTYVGWSLAVGETVRLSSASALQLSVLLYVTIV
VGVAIIGGFIRWMSRTFDARPTLNQCIGFAAYTVTPFFIAGLAGLYPSRWLAVLVLGAASIYSTFLLFVGLPTFMHERKE
QGLLYSASVWGVALLVLVTLLVSMILLWFNVLTPEYLRTTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=182, Percent_Identity=42.3076923076923, Blast_Score=148, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 22397; Mature: 22266

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPIIKLFTQPNFAWTDIRREEEAHPRHYLAHLLLLALVPAVCLFIGTTYVGWSLAVGE
CCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVRLSSASALQLSVLLYVTIVVGVAIIGGFIRWMSRTFDARPTLNQCIGFAAYTVTPFFI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGLAGLYPSRWLAVLVLGAASIYSTFLLFVGLPTFMHERKEQGLLYSASVWGVALLVLVT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHH
LLVSMILLWFNVLTPEYLRTTAG
HHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure 
SAPIIKLFTQPNFAWTDIRREEEAHPRHYLAHLLLLALVPAVCLFIGTTYVGWSLAVGE
CCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVRLSSASALQLSVLLYVTIVVGVAIIGGFIRWMSRTFDARPTLNQCIGFAAYTVTPFFI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGLAGLYPSRWLAVLVLGAASIYSTFLLFVGLPTFMHERKEQGLLYSASVWGVALLVLVT
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHH
LLVSMILLWFNVLTPEYLRTTAG
HHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]