| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458918
Identifier: 77458918
GI number: 77458918
Start: 3102375
End: 3103736
Strand: Reverse
Name: 77458918
Synonym: Pfl01_2693
Alternate gene names: NA
Gene position: 3103736-3102375 (Counterclockwise)
Preceding gene: 77458919
Following gene: 77458913
Centisome position: 48.21
GC content: 61.82
Gene sequence:
>1362_bases ATGAGCTTCATCATCTGGGTAGCGGTGCTCGGTGCCGTGCTGCTGACCCTGGCGCTGACATCGTCGTACCTGCGCTGGAT GCCGGTCACGACCTCGGCTGTTTGTCTGCTGCTGGGCGTCGGCATCGGGCCGGCAAGCCTCGATCTGCTGAAACTGCCGT TGAATGAAGCCTCGTTGTGGATGGAGCACCTGACCGAAGTCGCGGTGCTGTTTTCCCTGTTCGTCTGCGGTTTGAAGTTG CGGTTGCCTTTGCGCGACAAACGCTGGCGGATTGCTTTCGGCCTGGCGGGCCCGGTGATGGTGCTGACGATCATTGGCGT CTGCCTGTTGCTGCATTTTGGCCTGGATCTGAATTGGGGCTCTTCGCTGTTGATCGGCGCGATTCTGGCACCGACCGACC CGGTGCTCGCGGCGCTGGTACAGGTCAACGATGCGCGGGACGTCGACAGCGTGCGCTTCGGCCTGTCCGGCGAGGCCGGG CTCAACGACGGCGTTGCATTTCCCTTCGTGATCTTCGGGCTGTTGCTACTGAACGGTGAAGGGTTTGCCGCCGAGTGGCC CGACTGGGTACTGCGCAGCCTTGTGTGGGCGGTTCCGGCCGGGTTGCTTTGTGGCTACTGGATGGGCCGTGGCATCGGTC GTCTGACCCTCTCGCTACGTATCCGCAACGATGACAGCACTTTGAGCCCGAATGACTATCTGGCCCTGGCGTTGATTGCG CTGGCGTATGTGGTGGCTGAATCCATCGGTGGCTACGGTTTTCTGTCGGTATTCGCCGCCGGCCTCGGCTTGCGACAGGA GGAAGTCAAATCCACCGGCGCCCATCAACCACCCGCCGAACACATGGTGCAACCGGTTGTCGGTCATCAGAATGTCGAGC CGCAGCAGGCGGTGCACGGCGATACCGAGCGGCTGGAAGACAGTCAGGTGGCCGCCGGCATCATGATGGGCGACATGCTC GCCTTCGGCGGTCTGGTCGAGCGGGCGATGGAAGTGTTTCTGGTCACGCTGCTGGGTGTGGTGCTGGTCAGTCACTGGGA CTGGCGGGCGTTGCTGGTCGGCGGCGTGCTGTTCTGTGTCATTCGTCCCGTGTGCGTGGCGTTGATGCCGTGGGGATCGC TATTGGCAGGAGGCCAAAGATTGCTGATCGGCTGGTTCGGCATTCGTGGTATCGGCAGTCTGTTCTACCTCTTTTATGCG CTGAACCATGGGCTGGGCGACAGCGTGGGTACGCTGTGTACCGACCTGACCCTGTCGGTGGTGGCGCTGAGCATTCTGCT GCACGGTATCAGCACCCAGCCGATTCTCGCCCGCTACGAGCGGCGTAAAAAACCGGTCAATCCTAAACAGGACGGCCGTT GA
Upstream 100 bases:
>100_bases GCTGTGGTTCAACGTGCTGACGCCGGAATACCTGCGCACGACTGCGGGTTAGGCCGGTTATGTCGGGGCGGCATCGAACT GACCTTACAGGCCGCGCGTC
Downstream 100 bases:
>100_bases ACGCGGTGGTGCTTCAGCTTCCCGGGTTGGTCACCTGAATGTAGAAGGCATAACTGCCGAGCAACATCCAGAACGTGGCA AAGATCCACGGCGTACGAAT
Product: Sodium/hydrogen exchanger
Products: NA
Alternate protein names: Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter; Transporter CPA2 Family; Na(+)/H(+) Antiporter; Cation Transport Related Protein; Na+/H+ Antiporter CPA1 Family Protein; CPA1 Family Na(+)/H(+) Antiporter; Na+/H+ Antiporter-Like Protein; Cell Volume Regulation Protein A; Sodium/Proton Antiporter CPA1 Family; CPA1 Family Na+/H+ Antiporter; Ion Antiporter NhaP; Cation Transporter-Like Protein; NhaP-Type Na+/H+ And K+/H+ Antiporter Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSFIIWVAVLGAVLLTLALTSSYLRWMPVTTSAVCLLLGVGIGPASLDLLKLPLNEASLWMEHLTEVAVLFSLFVCGLKL RLPLRDKRWRIAFGLAGPVMVLTIIGVCLLLHFGLDLNWGSSLLIGAILAPTDPVLAALVQVNDARDVDSVRFGLSGEAG LNDGVAFPFVIFGLLLLNGEGFAAEWPDWVLRSLVWAVPAGLLCGYWMGRGIGRLTLSLRIRNDDSTLSPNDYLALALIA LAYVVAESIGGYGFLSVFAAGLGLRQEEVKSTGAHQPPAEHMVQPVVGHQNVEPQQAVHGDTERLEDSQVAAGIMMGDML AFGGLVERAMEVFLVTLLGVVLVSHWDWRALLVGGVLFCVIRPVCVALMPWGSLLAGGQRLLIGWFGIRGIGSLFYLFYA LNHGLGDSVGTLCTDLTLSVVALSILLHGISTQPILARYERRKKPVNPKQDGR
Sequences:
>Translated_453_residues MSFIIWVAVLGAVLLTLALTSSYLRWMPVTTSAVCLLLGVGIGPASLDLLKLPLNEASLWMEHLTEVAVLFSLFVCGLKL RLPLRDKRWRIAFGLAGPVMVLTIIGVCLLLHFGLDLNWGSSLLIGAILAPTDPVLAALVQVNDARDVDSVRFGLSGEAG LNDGVAFPFVIFGLLLLNGEGFAAEWPDWVLRSLVWAVPAGLLCGYWMGRGIGRLTLSLRIRNDDSTLSPNDYLALALIA LAYVVAESIGGYGFLSVFAAGLGLRQEEVKSTGAHQPPAEHMVQPVVGHQNVEPQQAVHGDTERLEDSQVAAGIMMGDML AFGGLVERAMEVFLVTLLGVVLVSHWDWRALLVGGVLFCVIRPVCVALMPWGSLLAGGQRLLIGWFGIRGIGSLFYLFYA LNHGLGDSVGTLCTDLTLSVVALSILLHGISTQPILARYERRKKPVNPKQDGR >Mature_452_residues SFIIWVAVLGAVLLTLALTSSYLRWMPVTTSAVCLLLGVGIGPASLDLLKLPLNEASLWMEHLTEVAVLFSLFVCGLKLR LPLRDKRWRIAFGLAGPVMVLTIIGVCLLLHFGLDLNWGSSLLIGAILAPTDPVLAALVQVNDARDVDSVRFGLSGEAGL NDGVAFPFVIFGLLLLNGEGFAAEWPDWVLRSLVWAVPAGLLCGYWMGRGIGRLTLSLRIRNDDSTLSPNDYLALALIAL AYVVAESIGGYGFLSVFAAGLGLRQEEVKSTGAHQPPAEHMVQPVVGHQNVEPQQAVHGDTERLEDSQVAAGIMMGDMLA FGGLVERAMEVFLVTLLGVVLVSHWDWRALLVGGVLFCVIRPVCVALMPWGSLLAGGQRLLIGWFGIRGIGSLFYLFYAL NHGLGDSVGTLCTDLTLSVVALSILLHGISTQPILARYERRKKPVNPKQDGR
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48807; Mature: 48676
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIIWVAVLGAVLLTLALTSSYLRWMPVTTSAVCLLLGVGIGPASLDLLKLPLNEASLW CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHH MEHLTEVAVLFSLFVCGLKLRLPLRDKRWRIAFGLAGPVMVLTIIGVCLLLHFGLDLNWG HHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC SSLLIGAILAPTDPVLAALVQVNDARDVDSVRFGLSGEAGLNDGVAFPFVIFGLLLLNGE CHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC GFAAEWPDWVLRSLVWAVPAGLLCGYWMGRGIGRLTLSLRIRNDDSTLSPNDYLALALIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH LAYVVAESIGGYGFLSVFAAGLGLRQEEVKSTGAHQPPAEHMVQPVVGHQNVEPQQAVHG HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCC DTERLEDSQVAAGIMMGDMLAFGGLVERAMEVFLVTLLGVVLVSHWDWRALLVGGVLFCV CHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRPVCVALMPWGSLLAGGQRLLIGWFGIRGIGSLFYLFYALNHGLGDSVGTLCTDLTLSV HHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VALSILLHGISTQPILARYERRKKPVNPKQDGR HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SFIIWVAVLGAVLLTLALTSSYLRWMPVTTSAVCLLLGVGIGPASLDLLKLPLNEASLW HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHH MEHLTEVAVLFSLFVCGLKLRLPLRDKRWRIAFGLAGPVMVLTIIGVCLLLHFGLDLNWG HHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC SSLLIGAILAPTDPVLAALVQVNDARDVDSVRFGLSGEAGLNDGVAFPFVIFGLLLLNGE CHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC GFAAEWPDWVLRSLVWAVPAGLLCGYWMGRGIGRLTLSLRIRNDDSTLSPNDYLALALIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH LAYVVAESIGGYGFLSVFAAGLGLRQEEVKSTGAHQPPAEHMVQPVVGHQNVEPQQAVHG HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCC DTERLEDSQVAAGIMMGDMLAFGGLVERAMEVFLVTLLGVVLVSHWDWRALLVGGVLFCV CHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IRPVCVALMPWGSLLAGGQRLLIGWFGIRGIGSLFYLFYALNHGLGDSVGTLCTDLTLSV HHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VALSILLHGISTQPILARYERRKKPVNPKQDGR HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA