| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yhhW [C]
Identifier: 77458896
GI number: 77458896
Start: 3070050
End: 3070745
Strand: Reverse
Name: yhhW [C]
Synonym: Pfl01_2671
Alternate gene names: 77458896
Gene position: 3070745-3070050 (Counterclockwise)
Preceding gene: 77458898
Following gene: 77458891
Centisome position: 47.69
GC content: 61.64
Gene sequence:
>696_bases ATGCTTGAACTCAGACCCTTCAGCTCGCTGGGCGGCGCCCATCACGGCTGGTTGGATGCCCATCACCATTTTTCGTTCGC CGAGTACTACGATCCGCAACGCATGAGCTGGGGCAACCTGCGCGTGTGGAACGACGACATCATTGCCGCCGGCACGGGCT TCCCTACTCACCCGCACCGCGACATGGAAATCATCACGTACGTGCGTGAAGGTGCGATCAGCCACCAAGACAACCTGGGC AACAAGGGCCGCACCGAGGCTGGCGACGTGCAGGTCATGAGCGCCGGCACCGGAATCGCCCACAGCGAATACAACCTGGA AGCCACGGACACCAAGATCTTCCAGATCTGGATTCTGCCGACCGAAACCGGCGCACCGCCGTCCTGGGGCGCCAAACCGT TCCCGAAAGGCAACCGCGAAGGTTTCGTGACCCTCGCCAGCGGCAAGGACGGTGACGATCAAAGCCTGCGCATCCGCGCC GACGCACGTTTGGTGGCGGCCAATATCAAGGCCGGGGAAACCGCTGAATACCGTCTCGATGCCGGACGTCGGGCGTATCT GGTTCCCGCTACGGGTGTCATTGAAGTCAACGGCTTGCGCGCACAAGCTCGAGACGGTGTGGCGGTGGCCGATGAACAGG TGTTGACCGTCACTGCGCTGGAAGACAGTGAAATCGTGTTGGTGGATCTGGCCTGA
Upstream 100 bases:
>100_bases TCTCGATGGTTGACTGATAGATGATGGCTGCCATCAATCACCGGTCTCGCTTCGTGGCTCAGGCATCGCGCCCCATGACG AACCTTTTGAGGAGACGATC
Downstream 100 bases:
>100_bases TCGGCGAATCGCGGGTACAAAAAAGGGCGACCTCAGGGTCGCCCTTTTCCGTTGCCTGGATTTACTGGGTGCTGATCGCA CCGTCTACCAGCATTTGCGC
Product: pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1210 [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA
Sequences:
>Translated_231_residues MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA >Mature_231_residues MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=44.5887445887446, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI1789493, Length=237, Percent_Identity=27.0042194092827, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25174; Mature: 25174
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHR CCEECCCHHCCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCC DMEIITYVREGAISHQDNLGNKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILP CHHEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCEEEEEEEEE TETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRADARLVAANIKAGETAEYRLD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEC AGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA CCCEEEEECCCCEEEECCCEECCCCCEEECCCEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHR CCEECCCHHCCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCC DMEIITYVREGAISHQDNLGNKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILP CHHEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCEEEEEEEEE TETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRADARLVAANIKAGETAEYRLD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEC AGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA CCCEEEEECCCCEEEECCCEECCCCCEEECCCEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]