Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yhhW [C]

Identifier: 77458896

GI number: 77458896

Start: 3070050

End: 3070745

Strand: Reverse

Name: yhhW [C]

Synonym: Pfl01_2671

Alternate gene names: 77458896

Gene position: 3070745-3070050 (Counterclockwise)

Preceding gene: 77458898

Following gene: 77458891

Centisome position: 47.69

GC content: 61.64

Gene sequence:

>696_bases
ATGCTTGAACTCAGACCCTTCAGCTCGCTGGGCGGCGCCCATCACGGCTGGTTGGATGCCCATCACCATTTTTCGTTCGC
CGAGTACTACGATCCGCAACGCATGAGCTGGGGCAACCTGCGCGTGTGGAACGACGACATCATTGCCGCCGGCACGGGCT
TCCCTACTCACCCGCACCGCGACATGGAAATCATCACGTACGTGCGTGAAGGTGCGATCAGCCACCAAGACAACCTGGGC
AACAAGGGCCGCACCGAGGCTGGCGACGTGCAGGTCATGAGCGCCGGCACCGGAATCGCCCACAGCGAATACAACCTGGA
AGCCACGGACACCAAGATCTTCCAGATCTGGATTCTGCCGACCGAAACCGGCGCACCGCCGTCCTGGGGCGCCAAACCGT
TCCCGAAAGGCAACCGCGAAGGTTTCGTGACCCTCGCCAGCGGCAAGGACGGTGACGATCAAAGCCTGCGCATCCGCGCC
GACGCACGTTTGGTGGCGGCCAATATCAAGGCCGGGGAAACCGCTGAATACCGTCTCGATGCCGGACGTCGGGCGTATCT
GGTTCCCGCTACGGGTGTCATTGAAGTCAACGGCTTGCGCGCACAAGCTCGAGACGGTGTGGCGGTGGCCGATGAACAGG
TGTTGACCGTCACTGCGCTGGAAGACAGTGAAATCGTGTTGGTGGATCTGGCCTGA

Upstream 100 bases:

>100_bases
TCTCGATGGTTGACTGATAGATGATGGCTGCCATCAATCACCGGTCTCGCTTCGTGGCTCAGGCATCGCGCCCCATGACG
AACCTTTTGAGGAGACGATC

Downstream 100 bases:

>100_bases
TCGGCGAATCGCGGGTACAAAAAAGGGCGACCTCAGGGTCGCCCTTTTCCGTTGCCTGGATTTACTGGGTGCTGATCGCA
CCGTCTACCAGCATTTGCGC

Product: pirin-like protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA1210 [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG
NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA
DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA

Sequences:

>Translated_231_residues
MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG
NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA
DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA
>Mature_231_residues
MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHRDMEIITYVREGAISHQDNLG
NKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILPTETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRA
DARLVAANIKAGETAEYRLDAGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=44.5887445887446, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789493, Length=237, Percent_Identity=27.0042194092827, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 25174; Mature: 25174

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHR
CCEECCCHHCCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCC
DMEIITYVREGAISHQDNLGNKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILP
CHHEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCEEEEEEEEE
TETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRADARLVAANIKAGETAEYRLD
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEC
AGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA
CCCEEEEECCCCEEEECCCEECCCCCEEECCCEEEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MLELRPFSSLGGAHHGWLDAHHHFSFAEYYDPQRMSWGNLRVWNDDIIAAGTGFPTHPHR
CCEECCCHHCCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCC
DMEIITYVREGAISHQDNLGNKGRTEAGDVQVMSAGTGIAHSEYNLEATDTKIFQIWILP
CHHEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCEEECCCEEEEEEEEE
TETGAPPSWGAKPFPKGNREGFVTLASGKDGDDQSLRIRADARLVAANIKAGETAEYRLD
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEC
AGRRAYLVPATGVIEVNGLRAQARDGVAVADEQVLTVTALEDSEIVLVDLA
CCCEEEEECCCCEEEECCCEECCCCCEEECCCEEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]