| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rcsC [C]
Identifier: 77458870
GI number: 77458870
Start: 3030756
End: 3031121
Strand: Reverse
Name: rcsC [C]
Synonym: Pfl01_2645
Alternate gene names: 77458870
Gene position: 3031121-3030756 (Counterclockwise)
Preceding gene: 77458876
Following gene: 77458869
Centisome position: 47.08
GC content: 54.92
Gene sequence:
>366_bases ATGTCCAGCCCTGTGTCCACCATCCTTGTAGTAGAAGACGATGCCATCGTGCGCATGCTGATCGTCGACGTGCTGGAGGA ATTGGAGTTCAAGGTTCTGGAGGCGGATGGCAGCGAGCAGGCACTGGACATCCTCAAGGATGTGAATCAGCACATCGACC TGATGATGACTGACGTTGGTCTGCCGATCATGGATGGCCGCCAACTGGCCACCGAAGCTCGCAACATTCGCCCGGCCCTG CCGATTCTGTTTGCCAGTGGTTATGCCGAGACCATTGAAGTGCCGGCGGACATGCATGTGATCGGCAAGCCGTTTTCAAT CGATCAGTTACGAGACAAAGTCAAAGCCGTACTTGAGTGTTCCTGA
Upstream 100 bases:
>100_bases TATCCACTCGGGAACTTGTGGCCATGCGCCACTTACTCATGCAAGAGCCCGGCATTTTTGATCGACCGGCGCCCCACCCC CATTCTTGAGAGCCGCCATT
Downstream 100 bases:
>100_bases AAGTTTCAACTTCCATTCCCGAACTATTCAAAGGGCGGATCCCGGGTCTGCCCTGACCAACTTTGAAACCAACTACAACT GTTCATCAGCCGCAGAACAA
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Sensory Box Sensor Histidine Kinase/Response Regulator; Response Regulator; Sensor Histidine Kinase/Response Regulator; Sensor Histidine Kinase; Integral Membrane Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Signal Transduction Histidine Kinase; Histidine Kinase/Response Regulator Hybrid Protein; Histidine Kinase-Response Regulator Hybrid Protein; Response Regulator Receiver Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component Sensor Histidine Kinase Protein; Sensory Transduction Protein Kinase; Two-Component Sensor Histidine Kinase; Sensor Protein; ATPase Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator Hybrid; PAS/PAC Sensor Protein; GAF Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase And Receiver; Sensor Histidine Kinase/Response Regulator Fusion Protein; Two-Component Response Regulator; Pas/Pac Sensor Hybrid Histidine Kinase; Sensor Kinase; Two-Component System Sensor Sporulation Kinase A; Response Regulator Receiver; Sensor/Response Regulator Hybrid; Sensory Box Histidine Kinase; PAS Fold Family; Sensor Kinase/Response Regulator Fusion Protein; Two-Component Hyrid Sensor And Regulator; Two Component Sensor Kinase/Response Regulator Hybrid; Sensory Box; Cell Cycle Histidine Kinase CckA; Signal Receiver Domain Protein; Sensor Kinase-Like Protein; Sensory Box Sensor Histidine Kianse/Response Regulator; PAS Domain-Containing Protein; Two Domain Fusion Protein; Periplasmic Sensor Hybrid Histidine Kinase; Histidine Kinase/Response Regulator; Hybrid Histidine Kinase; PAS-Family Sensor Histidine Kinase
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQHIDLMMTDVGLPIMDGRQLATEARNIRPAL PILFASGYAETIEVPADMHVIGKPFSIDQLRDKVKAVLECS
Sequences:
>Translated_121_residues MSSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQHIDLMMTDVGLPIMDGRQLATEARNIRPAL PILFASGYAETIEVPADMHVIGKPFSIDQLRDKVKAVLECS >Mature_120_residues SSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQHIDLMMTDVGLPIMDGRQLATEARNIRPALP ILFASGYAETIEVPADMHVIGKPFSIDQLRDKVKAVLECS
Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 13333; Mature: 13201
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQHIDLMMTDVG CCCCCCEEEEECCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC LPIMDGRQLATEARNIRPALPILFASGYAETIEVPADMHVIGKPFSIDQLRDKVKAVLEC CCCCCCHHHHHHHHCCCCCCHHEEECCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHCC S C >Mature Secondary Structure SSPVSTILVVEDDAIVRMLIVDVLEELEFKVLEADGSEQALDILKDVNQHIDLMMTDVG CCCCCEEEEECCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC LPIMDGRQLATEARNIRPALPILFASGYAETIEVPADMHVIGKPFSIDQLRDKVKAVLEC CCCCCCHHHHHHHHCCCCCCHHEEECCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA