Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458876

Identifier: 77458876

GI number: 77458876

Start: 3037940

End: 3038890

Strand: Reverse

Name: 77458876

Synonym: Pfl01_2651

Alternate gene names: NA

Gene position: 3038890-3037940 (Counterclockwise)

Preceding gene: 77458877

Following gene: 77458870

Centisome position: 47.2

GC content: 50.68

Gene sequence:

>951_bases
ATGGAGCTTAAAAAAGCGCTCGTGCTTTTGATGACGCTATCCATCGCGTCTTGTCAGACCCTGGAACAGACACAAGCCCC
ACCGCAAACGTCAGTAAATCGAGCGGGTATCAGTCAGACTTCATTGACCGCTTCGCAGAGTGGCGCACAAGTCGCAGCGA
CTCTAACTGCCAACTATTCGAATGACAGCCCAACCTGCGGAACTCTGGCGGCATTCGACTGTTCTGGCGTAGTTATAAGA
GGGACTGTCCCTTCTCCGAATTACTTTTCATGGAATCCCAGTCCCGTTTCACAACGGAATGGAGGGGTATCGGCCTCTTA
CTTGCGCAAAGATTCAAAATTTTCGAGGCTTGCTTATGGAATGACAAACGGATTTATCGTGGCACCCCTCGCAGAAGCTT
TACCCGGCAAAATCCAGTTGAAACCTCTTTGCAGTTTCCCTATCGATGGCTGGACACAGCGTCGACTAACGCCCTGTGGA
GCCCACCCAGACCATCCCAATCAAAGCCGAAGCTGCGAGATTATCGGAATCGATACTGCCGAAAAATGGATGGCTCATTG
GGCCTCTGCTCCAGGCGGTTATCCGCACACCTATCAATGCGGATTCAATGTAGTTAAAGCCACGCCGGCTGCCGATCGGT
TTTACCAGACCATTCGCGCAAGAAACATGCTGGGACCCGAGTGGTTCGGTGAGCAAAATGAACTGGTTTTAGAAACGTGG
CCACAAAACATTCCCGATCAATTACCCATTCTGGCGTTTTTCTATACCACGACTGGCTTGGCTGGCGCGCAACACGACCA
ACGCGATTTTTTCAAAGCAACCAATGGAATGTTTAAGCCAATCATCAAAATCACACTACCAACCTCCGCCTCAGGCAATG
CCACTTTTACATTCAACCCGGCAGACCAGGCGGAAGAGGAATGTACGCCTAACCCTGAAAACGCCTGCTAA

Upstream 100 bases:

>100_bases
TCTATTCATGATGTTGAAATCCACTTCAAGAAGGTCTCTCGCTGCTTGGCTGGTGAGTTTGGGCATTGGGCCTGAAGACC
AACTTGTGAGGTAGGAACAC

Downstream 100 bases:

>100_bases
GAGCTGGATCTCAGGCCAGCAGTTCCTGAATCTTCTCCTGCAACACATCCAGATCGAACGGTTTTTCCAGGATCGGTGCA
CGACGAGTGATCGGACTGCC

Product: halovibrin HvnA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR
GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG
AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW
PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC

Sequences:

>Translated_316_residues
MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR
GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG
AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW
PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC
>Mature_316_residues
MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR
GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG
AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW
PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34260; Mature: 34260

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHEECCCCCCEEEEEEEEECC
NDSPTCGTLAAFDCSGVVIRGTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYG
CCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHH
MTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCGAHPDHPNQSRSCEIIGIDTA
CCCCEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
EKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW
HHHHHHHHCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEC
PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNP
CCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECC
ADQAEEECTPNPENAC
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHEECCCCCCEEEEEEEEECC
NDSPTCGTLAAFDCSGVVIRGTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYG
CCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHH
MTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCGAHPDHPNQSRSCEIIGIDTA
CCCCEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
EKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW
HHHHHHHHCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEC
PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNP
CCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECC
ADQAEEECTPNPENAC
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA