| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458876
Identifier: 77458876
GI number: 77458876
Start: 3037940
End: 3038890
Strand: Reverse
Name: 77458876
Synonym: Pfl01_2651
Alternate gene names: NA
Gene position: 3038890-3037940 (Counterclockwise)
Preceding gene: 77458877
Following gene: 77458870
Centisome position: 47.2
GC content: 50.68
Gene sequence:
>951_bases ATGGAGCTTAAAAAAGCGCTCGTGCTTTTGATGACGCTATCCATCGCGTCTTGTCAGACCCTGGAACAGACACAAGCCCC ACCGCAAACGTCAGTAAATCGAGCGGGTATCAGTCAGACTTCATTGACCGCTTCGCAGAGTGGCGCACAAGTCGCAGCGA CTCTAACTGCCAACTATTCGAATGACAGCCCAACCTGCGGAACTCTGGCGGCATTCGACTGTTCTGGCGTAGTTATAAGA GGGACTGTCCCTTCTCCGAATTACTTTTCATGGAATCCCAGTCCCGTTTCACAACGGAATGGAGGGGTATCGGCCTCTTA CTTGCGCAAAGATTCAAAATTTTCGAGGCTTGCTTATGGAATGACAAACGGATTTATCGTGGCACCCCTCGCAGAAGCTT TACCCGGCAAAATCCAGTTGAAACCTCTTTGCAGTTTCCCTATCGATGGCTGGACACAGCGTCGACTAACGCCCTGTGGA GCCCACCCAGACCATCCCAATCAAAGCCGAAGCTGCGAGATTATCGGAATCGATACTGCCGAAAAATGGATGGCTCATTG GGCCTCTGCTCCAGGCGGTTATCCGCACACCTATCAATGCGGATTCAATGTAGTTAAAGCCACGCCGGCTGCCGATCGGT TTTACCAGACCATTCGCGCAAGAAACATGCTGGGACCCGAGTGGTTCGGTGAGCAAAATGAACTGGTTTTAGAAACGTGG CCACAAAACATTCCCGATCAATTACCCATTCTGGCGTTTTTCTATACCACGACTGGCTTGGCTGGCGCGCAACACGACCA ACGCGATTTTTTCAAAGCAACCAATGGAATGTTTAAGCCAATCATCAAAATCACACTACCAACCTCCGCCTCAGGCAATG CCACTTTTACATTCAACCCGGCAGACCAGGCGGAAGAGGAATGTACGCCTAACCCTGAAAACGCCTGCTAA
Upstream 100 bases:
>100_bases TCTATTCATGATGTTGAAATCCACTTCAAGAAGGTCTCTCGCTGCTTGGCTGGTGAGTTTGGGCATTGGGCCTGAAGACC AACTTGTGAGGTAGGAACAC
Downstream 100 bases:
>100_bases GAGCTGGATCTCAGGCCAGCAGTTCCTGAATCTTCTCCTGCAACACATCCAGATCGAACGGTTTTTCCAGGATCGGTGCA CGACGAGTGATCGGACTGCC
Product: halovibrin HvnA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC
Sequences:
>Translated_316_residues MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC >Mature_316_residues MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYSNDSPTCGTLAAFDCSGVVIR GTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYGMTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCG AHPDHPNQSRSCEIIGIDTAEKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNPADQAEEECTPNPENAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34260; Mature: 34260
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHEECCCCCCEEEEEEEEECC NDSPTCGTLAAFDCSGVVIRGTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYG CCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHH MTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCGAHPDHPNQSRSCEIIGIDTA CCCCEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH EKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW HHHHHHHHCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEC PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNP CCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECC ADQAEEECTPNPENAC HHHHHHHCCCCCCCCC >Mature Secondary Structure MELKKALVLLMTLSIASCQTLEQTQAPPQTSVNRAGISQTSLTASQSGAQVAATLTANYS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHEECCCCCCEEEEEEEEECC NDSPTCGTLAAFDCSGVVIRGTVPSPNYFSWNPSPVSQRNGGVSASYLRKDSKFSRLAYG CCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHH MTNGFIVAPLAEALPGKIQLKPLCSFPIDGWTQRRLTPCGAHPDHPNQSRSCEIIGIDTA CCCCEEEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH EKWMAHWASAPGGYPHTYQCGFNVVKATPAADRFYQTIRARNMLGPEWFGEQNELVLETW HHHHHHHHCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEC PQNIPDQLPILAFFYTTTGLAGAQHDQRDFFKATNGMFKPIIKITLPTSASGNATFTFNP CCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECC ADQAEEECTPNPENAC HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA