| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458867
Identifier: 77458867
GI number: 77458867
Start: 3024321
End: 3025160
Strand: Reverse
Name: 77458867
Synonym: Pfl01_2642
Alternate gene names: NA
Gene position: 3025160-3024321 (Counterclockwise)
Preceding gene: 77458868
Following gene: 77458866
Centisome position: 46.99
GC content: 52.98
Gene sequence:
>840_bases ATGAGCACCAATAACTGGATGGGCGCAACGCCCGCCATTGATACACTGACAATCGCTGAACTGACATTGCCCGGCACCCA CAACGCAGGCAGTGACTGGCGCGCCGACTACCCGCTCTCCCCGTCTCGCCATTGGCTGGTATGTCAGCACGATACCTTTT ACGCCCAACTGCACAATGGTTCCAGAGCGCTGGATATTCGCCTGAGCTATGAAGCCAGTGCGGAAGGTCCAAAAAAATTC ATTCTTCACCATAATGGTTTTCGAAACTCTCGGACATTAGGGCAACTGATCAACGACGTAGAACTTTTTCTGCAAAAAAA CCCTGACGAGTTCATTGTTCTTGATTTCCACAAACTTGATGGCAAAGACTTCGACCACGACTACTTCAATAAAATAATGA GCAGTTTTCTCGGGCATCGACTGATCCCGCGCTGGAACGCGGCCCTGAGCCTGCGGGAGCTGAAGCGCGCCAGCCCGCAA CAGCGAGTGTTCGCTGCCGGTCCAGGCATAGAACTTGATCACACGATATTCCACGATTATGTAAGCCATAAGTGGTCAGG CACCGATACGACTACGCCTGACGAGCTGAAGGCGTTCATCGGTAGTGTCATGCAGAATCCACCGGGTACCTGGCGCCCCT GGTCGTTGTCCGCCACCAGCTATACCTACCTGGGCGGTCCCGTCGACATCCATGACCAGTTGAACGAATGGTTCGATCTG GACAACAGTGACTGGGCATTGAAGTGCAACATCATCAATGTCGACTTCATCGAAGAGTCGGACCTGGTAGAGATTTGCCG GATTGCCAACTTGATGAAAGCCCGAGAACGGGCGCTCTGA
Upstream 100 bases:
>100_bases TAGCCATTAAAAAAGTTAAACGCTATAAACATCCTGCAAGTGCCATTCAAACAAAAAGTTTGGATGATCAACTAATCTTT AATTCAAGCAGGATGCATAA
Downstream 100 bases:
>100_bases GCGGCAATGGAAACTGGCGCAACCGACGAGGAACGAGGCATGATCACCGGGCGATAACAATAAAAGCGCTCTGCCATGAC CCGAACAGCCCGCGTGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSTNNWMGATPAIDTLTIAELTLPGTHNAGSDWRADYPLSPSRHWLVCQHDTFYAQLHNGSRALDIRLSYEASAEGPKKF ILHHNGFRNSRTLGQLINDVELFLQKNPDEFIVLDFHKLDGKDFDHDYFNKIMSSFLGHRLIPRWNAALSLRELKRASPQ QRVFAAGPGIELDHTIFHDYVSHKWSGTDTTTPDELKAFIGSVMQNPPGTWRPWSLSATSYTYLGGPVDIHDQLNEWFDL DNSDWALKCNIINVDFIEESDLVEICRIANLMKARERAL
Sequences:
>Translated_279_residues MSTNNWMGATPAIDTLTIAELTLPGTHNAGSDWRADYPLSPSRHWLVCQHDTFYAQLHNGSRALDIRLSYEASAEGPKKF ILHHNGFRNSRTLGQLINDVELFLQKNPDEFIVLDFHKLDGKDFDHDYFNKIMSSFLGHRLIPRWNAALSLRELKRASPQ QRVFAAGPGIELDHTIFHDYVSHKWSGTDTTTPDELKAFIGSVMQNPPGTWRPWSLSATSYTYLGGPVDIHDQLNEWFDL DNSDWALKCNIINVDFIEESDLVEICRIANLMKARERAL >Mature_278_residues STNNWMGATPAIDTLTIAELTLPGTHNAGSDWRADYPLSPSRHWLVCQHDTFYAQLHNGSRALDIRLSYEASAEGPKKFI LHHNGFRNSRTLGQLINDVELFLQKNPDEFIVLDFHKLDGKDFDHDYFNKIMSSFLGHRLIPRWNAALSLRELKRASPQQ RVFAAGPGIELDHTIFHDYVSHKWSGTDTTTPDELKAFIGSVMQNPPGTWRPWSLSATSYTYLGGPVDIHDQLNEWFDLD NSDWALKCNIINVDFIEESDLVEICRIANLMKARERAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31838; Mature: 31707
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50007 PIPLC_X_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNNWMGATPAIDTLTIAELTLPGTHNAGSDWRADYPLSPSRHWLVCQHDTFYAQLHNG CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCC SRALDIRLSYEASAEGPKKFILHHNGFRNSRTLGQLINDVELFLQKNPDEFIVLDFHKLD CEEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC GKDFDHDYFNKIMSSFLGHRLIPRWNAALSLRELKRASPQQRVFAAGPGIELDHTIFHDY CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHH VSHKWSGTDTTTPDELKAFIGSVMQNPPGTWRPWSLSATSYTYLGGPVDIHDQLNEWFDL HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCC DNSDWALKCNIINVDFIEESDLVEICRIANLMKARERAL CCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STNNWMGATPAIDTLTIAELTLPGTHNAGSDWRADYPLSPSRHWLVCQHDTFYAQLHNG CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCC SRALDIRLSYEASAEGPKKFILHHNGFRNSRTLGQLINDVELFLQKNPDEFIVLDFHKLD CEEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECC GKDFDHDYFNKIMSSFLGHRLIPRWNAALSLRELKRASPQQRVFAAGPGIELDHTIFHDY CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHH VSHKWSGTDTTTPDELKAFIGSVMQNPPGTWRPWSLSATSYTYLGGPVDIHDQLNEWFDL HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCC DNSDWALKCNIINVDFIEESDLVEICRIANLMKARERAL CCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA