| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458868
Identifier: 77458868
GI number: 77458868
Start: 3025313
End: 3026602
Strand: Reverse
Name: 77458868
Synonym: Pfl01_2643
Alternate gene names: NA
Gene position: 3026602-3025313 (Counterclockwise)
Preceding gene: 77458869
Following gene: 77458867
Centisome position: 47.01
GC content: 57.29
Gene sequence:
>1290_bases ATGAGTCAGCCCGCAACCAAAGTCCTCGTCATTGGTTACGTCTGGCCGGAACCTCGCTCCTCCGCCGCGAGCGGACATGT GATGCAGATTCTCGAGACGTTCCTGCGACAAGGCTGGCAAGTTACCTTTGCCAGCCCGGCCGGTACCGGTGAGCACCGCG CCGATCTGACTGCGCTGGGCATTCACGAAGTACCGATCGAACTGAACAACAGCAGTTTCGATGTGTTTATCAGTGAACTG GCCCCGGACATCGTGTTGTTCGACCAGTTCATGATCGAAGAACAGTTCGGTTGGCGAGTGGAGAAACACTGCCCCGATGC CTTGCGCGTTCTGGAAACGTCGGACCTGCAGAGCCTGCGGCATGCTCGACACCAGCGCTTGAAAGATCGACTGAAGCTCA GCGACGACGCCAACGATTTCCGAGGATTGTTTGCCCCGGCGCTCGCCGAAGAGTTCGAACTGATGGCCGAAACCGATCTG GCCAAGCGCGAGATCGCCGCGCTTTATCGTTGCGATCTGAACCTGATGATCTCGCCAGTGGAAATCGAGTTGCTGGTGCA ACAGTTCAAGCTGCCACCGGAATTGTTGCACTGGTGTCCGTTGATGGTCGAACCACTCGGCACACCGTCAAAACCCTTCG AGGAGCGCGCGCACTTCCTCAGTATCGGCAATTTCCGTCACGCCCCGAACTGGGACGCCGTTCTGTGGCTGAAGACGACA GTCTGGCCGCTGATTCGCGATCAACTGCCCAAGGCACAATTACATGTCTACGGCGCGTATACGCCGCCCAAGGCAACAGC GCTGCACAATGCGTCCCAGGGTTTCCACATCATGAACTGGGCGGAGGATGCATTGCAGGTCATGTCCGATGCCCGGATTT GCCTGGCCCCCCTGCGTTTCGGCGCCGGCATCAAGGGCAAGCTGATCGATGCCATGCTCTGCGGAACGCCCAGCGTGACG ACGCCGATCGGTGCTGAGGGGATGCACACGGATCATCTCTGGCCAGGAGCCGTGACGCAGTCGGCGCGGGCGTTCGCCGA TGCAGCGGTTCAGCTGTACAAGGACGAAGGGCTGTGGCAAACCGCTCAAACTCAAGGCAGCACGCTATTGCGTGATCGCT ATCAACAAGCGATTCATGGTCCTGCCCTTATTGAGAAAATAAAATACTGCCGTGAACATCTGGCGCAACTCAGAAAAAAC AACTTCACAGGCAGTATGTTGCGTCATCACGCACACAAGAGTACTCAGTACATGGCGCAGTGGATCGAAGCAAAAAACCG GAACACATGA
Upstream 100 bases:
>100_bases AGCAAGGCACCGATCTGATAAAAAGCGGATTGGCAGGCGCGCGCATTGTGTTCTAATTCGCGCGCCTTTTTTTGTCCCTT TGTCCCAGGAATCGTTACTC
Downstream 100 bases:
>100_bases CATGACGGAAAACTATAAAAACAATCTCCAACAACTTGCATCAATCCACTAATAGCCATTAAAAAAGTTAAACGCTATAA ACATCCTGCAAGTGCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyltransferase-Like Protein; Sugar Transferase; A-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Family Protein; Methyltransferase And Glycosyltransferase; Glycosyltransferase Family 4 Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSQPATKVLVIGYVWPEPRSSAASGHVMQILETFLRQGWQVTFASPAGTGEHRADLTALGIHEVPIELNNSSFDVFISEL APDIVLFDQFMIEEQFGWRVEKHCPDALRVLETSDLQSLRHARHQRLKDRLKLSDDANDFRGLFAPALAEEFELMAETDL AKREIAALYRCDLNLMISPVEIELLVQQFKLPPELLHWCPLMVEPLGTPSKPFEERAHFLSIGNFRHAPNWDAVLWLKTT VWPLIRDQLPKAQLHVYGAYTPPKATALHNASQGFHIMNWAEDALQVMSDARICLAPLRFGAGIKGKLIDAMLCGTPSVT TPIGAEGMHTDHLWPGAVTQSARAFADAAVQLYKDEGLWQTAQTQGSTLLRDRYQQAIHGPALIEKIKYCREHLAQLRKN NFTGSMLRHHAHKSTQYMAQWIEAKNRNT
Sequences:
>Translated_429_residues MSQPATKVLVIGYVWPEPRSSAASGHVMQILETFLRQGWQVTFASPAGTGEHRADLTALGIHEVPIELNNSSFDVFISEL APDIVLFDQFMIEEQFGWRVEKHCPDALRVLETSDLQSLRHARHQRLKDRLKLSDDANDFRGLFAPALAEEFELMAETDL AKREIAALYRCDLNLMISPVEIELLVQQFKLPPELLHWCPLMVEPLGTPSKPFEERAHFLSIGNFRHAPNWDAVLWLKTT VWPLIRDQLPKAQLHVYGAYTPPKATALHNASQGFHIMNWAEDALQVMSDARICLAPLRFGAGIKGKLIDAMLCGTPSVT TPIGAEGMHTDHLWPGAVTQSARAFADAAVQLYKDEGLWQTAQTQGSTLLRDRYQQAIHGPALIEKIKYCREHLAQLRKN NFTGSMLRHHAHKSTQYMAQWIEAKNRNT >Mature_428_residues SQPATKVLVIGYVWPEPRSSAASGHVMQILETFLRQGWQVTFASPAGTGEHRADLTALGIHEVPIELNNSSFDVFISELA PDIVLFDQFMIEEQFGWRVEKHCPDALRVLETSDLQSLRHARHQRLKDRLKLSDDANDFRGLFAPALAEEFELMAETDLA KREIAALYRCDLNLMISPVEIELLVQQFKLPPELLHWCPLMVEPLGTPSKPFEERAHFLSIGNFRHAPNWDAVLWLKTTV WPLIRDQLPKAQLHVYGAYTPPKATALHNASQGFHIMNWAEDALQVMSDARICLAPLRFGAGIKGKLIDAMLCGTPSVTT PIGAEGMHTDHLWPGAVTQSARAFADAAVQLYKDEGLWQTAQTQGSTLLRDRYQQAIHGPALIEKIKYCREHLAQLRKNN FTGSMLRHHAHKSTQYMAQWIEAKNRNT
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48404; Mature: 48273
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPATKVLVIGYVWPEPRSSAASGHVMQILETFLRQGWQVTFASPAGTGEHRADLTALG CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEC IHEVPIELNNSSFDVFISELAPDIVLFDQFMIEEQFGWRVEKHCPDALRVLETSDLQSLR EEECCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH HARHQRLKDRLKLSDDANDFRGLFAPALAEEFELMAETDLAKREIAALYRCDLNLMISPV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH EIELLVQQFKLPPELLHWCPLMVEPLGTPSKPFEERAHFLSIGNFRHAPNWDAVLWLKTT HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEHHH VWPLIRDQLPKAQLHVYGAYTPPKATALHNASQGFHIMNWAEDALQVMSDARICLAPLRF HHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHCCHHEEHHHHH GAGIKGKLIDAMLCGTPSVTTPIGAEGMHTDHLWPGAVTQSARAFADAAVQLYKDEGLWQ CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH TAQTQGSTLLRDRYQQAIHGPALIEKIKYCREHLAQLRKNNFTGSMLRHHAHKSTQYMAQ HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WIEAKNRNT HHHHCCCCC >Mature Secondary Structure SQPATKVLVIGYVWPEPRSSAASGHVMQILETFLRQGWQVTFASPAGTGEHRADLTALG CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEC IHEVPIELNNSSFDVFISELAPDIVLFDQFMIEEQFGWRVEKHCPDALRVLETSDLQSLR EEECCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH HARHQRLKDRLKLSDDANDFRGLFAPALAEEFELMAETDLAKREIAALYRCDLNLMISPV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH EIELLVQQFKLPPELLHWCPLMVEPLGTPSKPFEERAHFLSIGNFRHAPNWDAVLWLKTT HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEHHH VWPLIRDQLPKAQLHVYGAYTPPKATALHNASQGFHIMNWAEDALQVMSDARICLAPLRF HHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHCCHHEEHHHHH GAGIKGKLIDAMLCGTPSVTTPIGAEGMHTDHLWPGAVTQSARAFADAAVQLYKDEGLWQ CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH TAQTQGSTLLRDRYQQAIHGPALIEKIKYCREHLAQLRKNNFTGSMLRHHAHKSTQYMAQ HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WIEAKNRNT HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA