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The map label for this gene is ycjN [C]

Identifier: 77458865

GI number: 77458865

Start: 3021803

End: 3023113

Strand: Reverse

Name: ycjN [C]

Synonym: Pfl01_2640

Alternate gene names: 77458865

Gene position: 3023113-3021803 (Counterclockwise)

Preceding gene: 77458866

Following gene: 77458864

Centisome position: 46.95

GC content: 61.48

Gene sequence:

>1311_bases
ATGCAACCCACTGCAAAAGCTCTGCTGGCCCTCACCTGCATGACCCTCAGCAGCGTCAGCCTTGGCGCCCAGACCCTGAC
CATCGCCACCGTCAATAACAGCGACATGATCCGCATGCAAAAGCTCTCGAAAACCTTCGAGACCGAGCATCCGGACATCA
AGCTCAATTGGGTGGTGCTGGAAGAAAACGTCCTGCGTCAGCGCCTGACCACCGACATCGCCACCCAGGGCGGTCAGTTC
GACGTGTTGACCATCGGCATGTACGAAGCCGCACTCTGGGGTGCCAAGGGTTGGCTGGAGCCGATGAAGGATCTGCCGGC
CAGCTACGCCCTCGATGATGTGTTCCCGTCCGTACGCGAAGGCCTGTCAGTCAAGGGTTCGCTGTACGCCCTGCCGTTTT
ACGCCGAGAGCTCGATCACCTACTACCGCACCGACCTGTTCAAGGACGCCGGCCTGACCATGCCGGAGCGTCCGACCTGG
GAGCAGATCGCCGGCTTCGCCGAGAAACTCACCAATAAGGACAAGGAACAATACGGCATCTGCCTGCGTGGCAAGGCCGG
CTGGGGCGAGAACATGGCGCTGATCACCACCGTGGCCAACGCCTATGGCGCGCGCTGGTTCGATGAGCAATGGAAACCGG
AATTCAGCGGTCCGGAATGGAAAAACGCGCTGAACTTCTATGTCGACACCATGAAGAAATCCGGCCCGCCGGGCGCCTCC
AGCAACGGTTTCAACGAGAACCTCGCCCTGTTCAACAGCGGCAAATGCGCGATCTGGGTCGATGCCAGCGTCGCCGGCTC
GTTCGTCACCGACAAGACCCAAAGCAAGGTCGCCGATCACGTCGGCTTCACCTACGCGCCGCATCAGGTCACCGACAAAG
GCTCGGCCTGGCTGTACTCGTGGGCGCTGGCGATTCCGACCAGCTCCAAGGCCAAGGACGCCGCCAAGCAATTCAGCGCC
TGGGCTACCTCCAAAGAGTACGGCGAACTGGTCGCCAAGACCGACGGCATCGCCAACGTTCCGCCGGGCACCCGCGCCTC
GACCTACAGCGACGCTTACATGAGCGCCGCACCGTTTGCCAAGGTCACGCTGGAATCGCTGAAAGCGGCCGATCCGAGCA
AACCGACCTTCAAACCCGTGCCGTACATCGGCATTCAACTGGTGACCATTCCCGAGTTTCAGGGGATCGGCACACAGGTC
GGCAAGCTGTTCTCCGCCGCACTGATCGGCCAGACCACGGTCGACCAAGCGCTGACCGCCGCCCAGCAAACCACCGAACG
CGAGATGAAGCGCGCGGGTTATCCGAAGTAA

Upstream 100 bases:

>100_bases
TCAGAAGGCTGTAATCAGTGCACATTCTTCCCCCGCCGGAAGAACACAAAAACAATAACTGTCCTTCTGCCCCCCGCCGG
GTGCAGAAAAGGAGTGCACG

Downstream 100 bases:

>100_bases
TCCTGCGCATTTCCATGTGGGAGCGAGCCTGCTCGCGATAGCGGTAATACGGTCTCAATAAATGTGGCGGATGGACCACC
CTCATCGCGAACAGGCTCGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MQPTAKALLALTCMTLSSVSLGAQTLTIATVNNSDMIRMQKLSKTFETEHPDIKLNWVVLEENVLRQRLTTDIATQGGQF
DVLTIGMYEAALWGAKGWLEPMKDLPASYALDDVFPSVREGLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPERPTW
EQIAGFAEKLTNKDKEQYGICLRGKAGWGENMALITTVANAYGARWFDEQWKPEFSGPEWKNALNFYVDTMKKSGPPGAS
SNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTYAPHQVTDKGSAWLYSWALAIPTSSKAKDAAKQFSA
WATSKEYGELVAKTDGIANVPPGTRASTYSDAYMSAAPFAKVTLESLKAADPSKPTFKPVPYIGIQLVTIPEFQGIGTQV
GKLFSAALIGQTTVDQALTAAQQTTEREMKRAGYPK

Sequences:

>Translated_436_residues
MQPTAKALLALTCMTLSSVSLGAQTLTIATVNNSDMIRMQKLSKTFETEHPDIKLNWVVLEENVLRQRLTTDIATQGGQF
DVLTIGMYEAALWGAKGWLEPMKDLPASYALDDVFPSVREGLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPERPTW
EQIAGFAEKLTNKDKEQYGICLRGKAGWGENMALITTVANAYGARWFDEQWKPEFSGPEWKNALNFYVDTMKKSGPPGAS
SNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTYAPHQVTDKGSAWLYSWALAIPTSSKAKDAAKQFSA
WATSKEYGELVAKTDGIANVPPGTRASTYSDAYMSAAPFAKVTLESLKAADPSKPTFKPVPYIGIQLVTIPEFQGIGTQV
GKLFSAALIGQTTVDQALTAAQQTTEREMKRAGYPK
>Mature_436_residues
MQPTAKALLALTCMTLSSVSLGAQTLTIATVNNSDMIRMQKLSKTFETEHPDIKLNWVVLEENVLRQRLTTDIATQGGQF
DVLTIGMYEAALWGAKGWLEPMKDLPASYALDDVFPSVREGLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPERPTW
EQIAGFAEKLTNKDKEQYGICLRGKAGWGENMALITTVANAYGARWFDEQWKPEFSGPEWKNALNFYVDTMKKSGPPGAS
SNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTYAPHQVTDKGSAWLYSWALAIPTSSKAKDAAKQFSA
WATSKEYGELVAKTDGIANVPPGTRASTYSDAYMSAAPFAKVTLESLKAADPSKPTFKPVPYIGIQLVTIPEFQGIGTQV
GKLFSAALIGQTTVDQALTAAQQTTEREMKRAGYPK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47588; Mature: 47588

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTAKALLALTCMTLSSVSLGAQTLTIATVNNSDMIRMQKLSKTFETEHPDIKLNWVVL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEE
EENVLRQRLTTDIATQGGQFDVLTIGMYEAALWGAKGWLEPMKDLPASYALDDVFPSVRE
CHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHC
GLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPERPTWEQIAGFAEKLTNKDKEQYGI
CCCCCCEEEEEEEEECCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCE
CLRGKAGWGENMALITTVANAYGARWFDEQWKPEFSGPEWKNALNFYVDTMKKSGPPGAS
EEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTYAPHQVTDKGSAWLYS
CCCCCCCEEEEECCCEEEEEECCCCCCHHCCHHHHHHHHHCCCEECCCCCCCCCCEEEEE
WALAIPTSSKAKDAAKQFSAWATSKEYGELVAKTDGIANVPPGTRASTYSDAYMSAAPFA
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHH
KVTLESLKAADPSKPTFKPVPYIGIQLVTIPEFQGIGTQVGKLFSAALIGQTTVDQALTA
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
AQQTTEREMKRAGYPK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPTAKALLALTCMTLSSVSLGAQTLTIATVNNSDMIRMQKLSKTFETEHPDIKLNWVVL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEE
EENVLRQRLTTDIATQGGQFDVLTIGMYEAALWGAKGWLEPMKDLPASYALDDVFPSVRE
CHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHC
GLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPERPTWEQIAGFAEKLTNKDKEQYGI
CCCCCCEEEEEEEEECCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCE
CLRGKAGWGENMALITTVANAYGARWFDEQWKPEFSGPEWKNALNFYVDTMKKSGPPGAS
EEECCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
SNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTYAPHQVTDKGSAWLYS
CCCCCCCEEEEECCCEEEEEECCCCCCHHCCHHHHHHHHHCCCEECCCCCCCCCCEEEEE
WALAIPTSSKAKDAAKQFSAWATSKEYGELVAKTDGIANVPPGTRASTYSDAYMSAAPFA
EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHH
KVTLESLKAADPSKPTFKPVPYIGIQLVTIPEFQGIGTQVGKLFSAALIGQTTVDQALTA
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
AQQTTEREMKRAGYPK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]