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The map label for this gene is ugpA [C]

Identifier: 77458864

GI number: 77458864

Start: 3020731

End: 3021657

Strand: Reverse

Name: ugpA [C]

Synonym: Pfl01_2639

Alternate gene names: 77458864

Gene position: 3021657-3020731 (Counterclockwise)

Preceding gene: 77458865

Following gene: 77458863

Centisome position: 46.93

GC content: 60.41

Gene sequence:

>927_bases
ATGAATACTTCAACTGCCAAAGCCCACATCGACCTGTCGCAGCCCCGGCGCAAAAGCCGCGTGGCCAATCCCGGCTGGTT
CCTGGTCAGCCCTTCGGTGGCCCTGTTGCTGCTGTGGATGATCGTGCCGCTGGGCATGACCGTCTATTTCTCGATGATCC
GCTACAACCTGCTCGACCCGGGCACCAACGAATTCGTCGGGCTGGAAAACTTCACCTACTTTCTGACCGACTCCGGCTTC
ATGCCCGGTGCCACCAACACCTTATTGCTGGTAGGCAGCGTGCTGTTGATCAGCGTGGTGTTCGGCGTGTTGATCAGTGC
GTTGCTGGAAGCCAGCGAATTCTTCGGTCGCGGCATCGTGCGAGTGATGCTGATTTCGCCGTTCTTCATCATGCCCACGG
TCGGTGCGCTGATCTGGAAGAACCTGATTTTCCATCCGGTGTCCGGGATCCTCGCCTACCTCTGGAAACTGTTCGGCGCG
CAGCCGGTGGACTGGCTGGCGCACTACCCGCTGCTGTCGATCATCATCATTGTCTCGTGGCAATGGCTGCCCTTCGCGAT
CCTGATCCTGATGACCGCCATGCAGTCCCTCGACCAGGAACAGAAAGAAGCCGCGCGCCTCGATGGCGCTGGCCCGATCG
CGATCTTCTGGCACCTGACCCTGCCGCACCTGGCGCGGCCGATTGCCGTGGTGGTGATGATCGAAACCATCTTCCTGCTG
TCGGTGTTCGCCGAAATCTTCACTACCACCAACGGCGGCCCCGGCTACGCGTCGACCAACCTCGCCTACCTGATCTACAA
CCAGGCGCTGGTGCAGTTCGACGTCGGGATGGCCTCGGCCGGCGGCCTGATCGCCGTGGTCATCGCCAACATCGCCGCGA
TCATTCTGGTGCGGATGATCGGCAAAAACCTGACTGACAAAGCCTGA

Upstream 100 bases:

>100_bases
AATACGGTCTCAATAAATGTGGCGGATGGACCACCCTCATCGCGAACAGGCTCGCTCCCAGAGTGGATCGAGTCTGCCTT
TTAAAACGGTTGTGATCACC

Downstream 100 bases:

>100_bases
GGCCTGCCATGACTCTTCAACAATCCCGCCGGCTGCAAAGCCTGCTGCTCGGCACGCTGGCCTGGGCCATCGCGATCATC
ATTTTCTTCCCGATCTTCTG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNTSTAKAHIDLSQPRRKSRVANPGWFLVSPSVALLLLWMIVPLGMTVYFSMIRYNLLDPGTNEFVGLENFTYFLTDSGF
MPGATNTLLLVGSVLLISVVFGVLISALLEASEFFGRGIVRVMLISPFFIMPTVGALIWKNLIFHPVSGILAYLWKLFGA
QPVDWLAHYPLLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPIAIFWHLTLPHLARPIAVVVMIETIFLL
SVFAEIFTTTNGGPGYASTNLAYLIYNQALVQFDVGMASAGGLIAVVIANIAAIILVRMIGKNLTDKA

Sequences:

>Translated_308_residues
MNTSTAKAHIDLSQPRRKSRVANPGWFLVSPSVALLLLWMIVPLGMTVYFSMIRYNLLDPGTNEFVGLENFTYFLTDSGF
MPGATNTLLLVGSVLLISVVFGVLISALLEASEFFGRGIVRVMLISPFFIMPTVGALIWKNLIFHPVSGILAYLWKLFGA
QPVDWLAHYPLLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPIAIFWHLTLPHLARPIAVVVMIETIFLL
SVFAEIFTTTNGGPGYASTNLAYLIYNQALVQFDVGMASAGGLIAVVIANIAAIILVRMIGKNLTDKA
>Mature_308_residues
MNTSTAKAHIDLSQPRRKSRVANPGWFLVSPSVALLLLWMIVPLGMTVYFSMIRYNLLDPGTNEFVGLENFTYFLTDSGF
MPGATNTLLLVGSVLLISVVFGVLISALLEASEFFGRGIVRVMLISPFFIMPTVGALIWKNLIFHPVSGILAYLWKLFGA
QPVDWLAHYPLLSIIIIVSWQWLPFAILILMTAMQSLDQEQKEAARLDGAGPIAIFWHLTLPHLARPIAVVVMIETIFLL
SVFAEIFTTTNGGPGYASTNLAYLIYNQALVQFDVGMASAGGLIAVVIANIAAIILVRMIGKNLTDKA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=304, Percent_Identity=25, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790465, Length=232, Percent_Identity=28.448275862069, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787570, Length=270, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33787; Mature: 33787

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSTAKAHIDLSQPRRKSRVANPGWFLVSPSVALLLLWMIVPLGMTVYFSMIRYNLLDP
CCCCCCEEEEECCCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTNEFVGLENFTYFLTDSGFMPGATNTLLLVGSVLLISVVFGVLISALLEASEFFGRGIV
CCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVMLISPFFIMPTVGALIWKNLIFHPVSGILAYLWKLFGAQPVDWLAHYPLLSIIIIVSW
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
QWLPFAILILMTAMQSLDQEQKEAARLDGAGPIAIFWHLTLPHLARPIAVVVMIETIFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
SVFAEIFTTTNGGPGYASTNLAYLIYNQALVQFDVGMASAGGLIAVVIANIAAIILVRMI
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GKNLTDKA
CCCCCCCC
>Mature Secondary Structure
MNTSTAKAHIDLSQPRRKSRVANPGWFLVSPSVALLLLWMIVPLGMTVYFSMIRYNLLDP
CCCCCCEEEEECCCCHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTNEFVGLENFTYFLTDSGFMPGATNTLLLVGSVLLISVVFGVLISALLEASEFFGRGIV
CCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVMLISPFFIMPTVGALIWKNLIFHPVSGILAYLWKLFGAQPVDWLAHYPLLSIIIIVSW
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
QWLPFAILILMTAMQSLDQEQKEAARLDGAGPIAIFWHLTLPHLARPIAVVVMIETIFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
SVFAEIFTTTNGGPGYASTNLAYLIYNQALVQFDVGMASAGGLIAVVIANIAAIILVRMI
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GKNLTDKA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]