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The map label for this gene is ycjP [C]

Identifier: 77458863

GI number: 77458863

Start: 3019892

End: 3020722

Strand: Reverse

Name: ycjP [C]

Synonym: Pfl01_2638

Alternate gene names: 77458863

Gene position: 3020722-3019892 (Counterclockwise)

Preceding gene: 77458864

Following gene: 77458862

Centisome position: 46.92

GC content: 60.65

Gene sequence:

>831_bases
ATGACTCTTCAACAATCCCGCCGGCTGCAAAGCCTGCTGCTCGGCACGCTGGCCTGGGCCATCGCGATCATCATTTTCTT
CCCGATCTTCTGGATGGTGCTGACCAGTTTCAAGACCGAAATCGACGCTTTCGCCACCCCGCCGCAGTTCATCTTCACGC
CGACGCTGGAGAACTACCTGCACATCAACGAGCGCAGCGACTACTTCAGTTTTGCCTGGAACTCGGTGGTGATTTCCTTC
AGCGCCACGGCTCTTTGCCTGCTGATCGCGGTGCCGGCGGCCTACTCGATGGCGTTCTACGAAACCCAGCGCACCAAGGG
CACGCTGCTATGGATGCTCTCCACCAAGATGCTGCCGCCGGTGGGCGTGCTGATGCCGATCTACCTGCTGGCCAAGAGTT
TCGGCCTGCTCGACACGCGCATCGCGCTGATCGTGATCTACACGCTGATCAACCTGCCGATCGTGGTCTGGATGGTTTAC
ACCTACTTCAAGGACATCCCCAAGGACATCCTCGAAGCCGCCCGCCTCGACGGCGCCACCCTCGCCCAGGAAATGCTCCG
CGTGCTGTTGCCGATCGCCAAGGGCGGCCTGGCTTCGACCGTACTGCTCTCGCTGATCCTGTGCTGGAACGAGGCGTTCT
GGTCGTTGAACCTGACCTCGTCCAAAGCCGCGCCACTGACCGCGTTGATCGCTTCCTACTCAAGCCCCGAAGGCTTGTTC
TGGGCCAAGTTGTCGGCCGTCTCGACCCTGGCCTGCGCGCCGATCCTGATCTTCGGCTGGATCAGCCAGAAACAACTGGT
GCGCGGCCTGTCGTTCGGTGCCGTGAAATAA

Upstream 100 bases:

>100_bases
CGGCCGGCGGCCTGATCGCCGTGGTCATCGCCAACATCGCCGCGATCATTCTGGTGCGGATGATCGGCAAAAACCTGACT
GACAAAGCCTGAGGCCTGCC

Downstream 100 bases:

>100_bases
GAACTCGCATGAGGAGCGCCACCATGGCCAACCTGAAAATCAAGAATCTGCAAAAAGGCTTCGAAGGTTTTTCCATCATC
AAGGGCATCGACCTTGAAGT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTLQQSRRLQSLLLGTLAWAIAIIIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSDYFSFAWNSVVISF
SATALCLLIAVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLDTRIALIVIYTLINLPIVVWMVY
TYFKDIPKDILEAARLDGATLAQEMLRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSKAAPLTALIASYSSPEGLF
WAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK

Sequences:

>Translated_276_residues
MTLQQSRRLQSLLLGTLAWAIAIIIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSDYFSFAWNSVVISF
SATALCLLIAVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLDTRIALIVIYTLINLPIVVWMVY
TYFKDIPKDILEAARLDGATLAQEMLRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSKAAPLTALIASYSSPEGLF
WAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
>Mature_275_residues
TLQQSRRLQSLLLGTLAWAIAIIIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYLHINERSDYFSFAWNSVVISFS
ATALCLLIAVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLDTRIALIVIYTLINLPIVVWMVYT
YFKDIPKDILEAARLDGATLAQEMLRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSKAAPLTALIASYSSPEGLFW
AKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=30.7116104868914, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=30.8056872037915, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=21.8867924528302, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30693; Mature: 30562

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQQSRRLQSLLLGTLAWAIAIIIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHE
HINERSDYFSFAWNSVVISFSATALCLLIAVPAAYSMAFYETQRTKGTLLWMLSTKMLPP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCC
VGVLMPIYLLAKSFGLLDTRIALIVIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGAT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LAQEMLRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSKAAPLTALIASYSSPEGLF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCHH
WAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLQQSRRLQSLLLGTLAWAIAIIIFFPIFWMVLTSFKTEIDAFATPPQFIFTPTLENYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHE
HINERSDYFSFAWNSVVISFSATALCLLIAVPAAYSMAFYETQRTKGTLLWMLSTKMLPP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCC
VGVLMPIYLLAKSFGLLDTRIALIVIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGAT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LAQEMLRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSKAAPLTALIASYSSPEGLF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCCCCHH
WAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]