| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458818
Identifier: 77458818
GI number: 77458818
Start: 2971890
End: 2973194
Strand: Reverse
Name: 77458818
Synonym: Pfl01_2593
Alternate gene names: NA
Gene position: 2973194-2971890 (Counterclockwise)
Preceding gene: 77458819
Following gene: 77458816
Centisome position: 46.18
GC content: 59.39
Gene sequence:
>1305_bases ATGTATCGATCAGTATCACTGCGTGCCGCTGTATGTTTGAGTACTCTTCTACCCGCGGCGATGCTGCAAGCTGCACCCGA CGCCGATGTAGAAGCCCTGAAACAGGAACTTCTGGAGCTTAAGCAACGATACGAAGTACAACAGAAAGCCCTGGCGGTGC TCGAACAACGGGTCCGCCAGGTCGAAGAGCAACCCGCCTCCCCGCCCCCAAAACGCCTGGCCAAATCGCCTTCGGACATG AAAGGCAACCGGGTGGCTGCAGGGACCGGGGCTGCAGCAGCGTCGGGGGGCGCCGCCGGGGGCAGCGGTGCATCCTATGG CCAGTCGCTGGCCGACGATTCGCAACCGGCACAGAGCGTGTCCAACCTGTATGACGAAGCCAGCGGCTTCTTTGGCGGCG GCAAGTTCAGCTTTGAAACCGGCGTGACCTATTCGCGCTACGACACCCGCCAACTGATCCTCAACGGTTTCCTCGCCCTG GACTCGATTTTTCTGGGCAACATCAACCTCGACCGGATCAAGGCCGATACCTGGACGCTGGACCTGACGGGCCGCTATAA CTTCGACAACCGCTGGCAATTCGACCTGAACGTGCCGGTCGTGTATCGCGAATCGACCTATCAGTCCGGCGGCGGCAACG GCGGTGCATCCAACGTCACCACCGAACAGGACGTCAGCCGCGACCCGACTCTCGGCGACGTCAACTTCGGCATTGCGTAT AAGTTCCTGGACGAGTCGGTCAACACTCCGGATGCCGTGGTTTCCTTGCGGGTCAAGGCGCCAACCGGCAAGGACCCGTT CGGGATCAAGCTGCGCCAGACCGATGCCAACTCGAACCTGTTCGTGCCTGACACCTTGCCTACCGGCAACGGCGTATGGT CGATCACCCCGGGCATCTCGCTGGTCAAGACGTTTGACCCTGCCGTGTTGTTCGGCAGTTTGTCCTACACCCATAACTTC GAGGAGTCGTTCGACGACATCAGTTCGACCGTCAACCAGAAAAACCCGGGCAAGGTTCGCATCGGCGACAGCTTCCAGAT TGGTGCGGGCGTTGCCTTCGCACTGAACGAGAAGATGAGTATGTCGTTCTCAGTGTCTGACCTGGTACAACGCAAGAGCA AGCTGAAACAGGATGGCGGGGATTGGGAATCGGTGGTGTCCAGCGACGCCAACGCCGGTTACTTCAACGTCGGCATGACC ATCGCGGCCACCGACAACCTGACCATTGTGCCCAACCTGTCCATCGGCATGACGGACGATGCCCCGGACTTCTCCTTCAG CCTGAAATTCCCGTATTACTTCTAA
Upstream 100 bases:
>100_bases CGCACTGGACTGCAACCTGACTCAACTCAGGGCACTACGCAACATCGGATATTGAACTACGCTGAGTCTCGATCATTGGG CTTAAAGGGACGGCTTATTC
Downstream 100 bases:
>100_bases ACCGCAACAGCATGAAAAGGCCCGCTGCGACTTGCATCGCAGCGGGCCTTTTCAGCTTCCTGGACTCAGAAAGCGCCGCG CCCTAGCGGATCTGGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MYRSVSLRAAVCLSTLLPAAMLQAAPDADVEALKQELLELKQRYEVQQKALAVLEQRVRQVEEQPASPPPKRLAKSPSDM KGNRVAAGTGAAAASGGAAGGSGASYGQSLADDSQPAQSVSNLYDEASGFFGGGKFSFETGVTYSRYDTRQLILNGFLAL DSIFLGNINLDRIKADTWTLDLTGRYNFDNRWQFDLNVPVVYRESTYQSGGGNGGASNVTTEQDVSRDPTLGDVNFGIAY KFLDESVNTPDAVVSLRVKAPTGKDPFGIKLRQTDANSNLFVPDTLPTGNGVWSITPGISLVKTFDPAVLFGSLSYTHNF EESFDDISSTVNQKNPGKVRIGDSFQIGAGVAFALNEKMSMSFSVSDLVQRKSKLKQDGGDWESVVSSDANAGYFNVGMT IAATDNLTIVPNLSIGMTDDAPDFSFSLKFPYYF
Sequences:
>Translated_434_residues MYRSVSLRAAVCLSTLLPAAMLQAAPDADVEALKQELLELKQRYEVQQKALAVLEQRVRQVEEQPASPPPKRLAKSPSDM KGNRVAAGTGAAAASGGAAGGSGASYGQSLADDSQPAQSVSNLYDEASGFFGGGKFSFETGVTYSRYDTRQLILNGFLAL DSIFLGNINLDRIKADTWTLDLTGRYNFDNRWQFDLNVPVVYRESTYQSGGGNGGASNVTTEQDVSRDPTLGDVNFGIAY KFLDESVNTPDAVVSLRVKAPTGKDPFGIKLRQTDANSNLFVPDTLPTGNGVWSITPGISLVKTFDPAVLFGSLSYTHNF EESFDDISSTVNQKNPGKVRIGDSFQIGAGVAFALNEKMSMSFSVSDLVQRKSKLKQDGGDWESVVSSDANAGYFNVGMT IAATDNLTIVPNLSIGMTDDAPDFSFSLKFPYYF >Mature_434_residues MYRSVSLRAAVCLSTLLPAAMLQAAPDADVEALKQELLELKQRYEVQQKALAVLEQRVRQVEEQPASPPPKRLAKSPSDM KGNRVAAGTGAAAASGGAAGGSGASYGQSLADDSQPAQSVSNLYDEASGFFGGGKFSFETGVTYSRYDTRQLILNGFLAL DSIFLGNINLDRIKADTWTLDLTGRYNFDNRWQFDLNVPVVYRESTYQSGGGNGGASNVTTEQDVSRDPTLGDVNFGIAY KFLDESVNTPDAVVSLRVKAPTGKDPFGIKLRQTDANSNLFVPDTLPTGNGVWSITPGISLVKTFDPAVLFGSLSYTHNF EESFDDISSTVNQKNPGKVRIGDSFQIGAGVAFALNEKMSMSFSVSDLVQRKSKLKQDGGDWESVVSSDANAGYFNVGMT IAATDNLTIVPNLSIGMTDDAPDFSFSLKFPYYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46699; Mature: 46699
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRSVSLRAAVCLSTLLPAAMLQAAPDADVEALKQELLELKQRYEVQQKALAVLEQRVRQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEQPASPPPKRLAKSPSDMKGNRVAAGTGAAAASGGAAGGSGASYGQSLADDSQPAQSV HHHCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCHHCCCCHHHHHH SNLYDEASGFFGGGKFSFETGVTYSRYDTRQLILNGFLALDSIFLGNINLDRIKADTWTL HHHHHHHCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHEEECCCCHHEEEECEEEE DLTGRYNFDNRWQFDLNVPVVYRESTYQSGGGNGGASNVTTEQDVSRDPTLGDVNFGIAY EEEEEECCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEE KFLDESVNTPDAVVSLRVKAPTGKDPFGIKLRQTDANSNLFVPDTLPTGNGVWSITPGIS EEHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEECCCCE LVKTFDPAVLFGSLSYTHNFEESFDDISSTVNQKNPGKVRIGDSFQIGAGVAFALNEKMS EEHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEECCCEEEEECCCCC MSFSVSDLVQRKSKLKQDGGDWESVVSSDANAGYFNVGMTIAATDNLTIVPNLSIGMTDD EEECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECEEEEECCCEEEEECCEECCCCC APDFSFSLKFPYYF CCCCEEEEECCCCC >Mature Secondary Structure MYRSVSLRAAVCLSTLLPAAMLQAAPDADVEALKQELLELKQRYEVQQKALAVLEQRVRQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEQPASPPPKRLAKSPSDMKGNRVAAGTGAAAASGGAAGGSGASYGQSLADDSQPAQSV HHHCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCHHCCCCHHHHHH SNLYDEASGFFGGGKFSFETGVTYSRYDTRQLILNGFLALDSIFLGNINLDRIKADTWTL HHHHHHHCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHEEECCCCHHEEEECEEEE DLTGRYNFDNRWQFDLNVPVVYRESTYQSGGGNGGASNVTTEQDVSRDPTLGDVNFGIAY EEEEEECCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEE KFLDESVNTPDAVVSLRVKAPTGKDPFGIKLRQTDANSNLFVPDTLPTGNGVWSITPGIS EEHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEEECCCCCCCCCEEEECCCCE LVKTFDPAVLFGSLSYTHNFEESFDDISSTVNQKNPGKVRIGDSFQIGAGVAFALNEKMS EEHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEECCCEEEEECCCCC MSFSVSDLVQRKSKLKQDGGDWESVVSSDANAGYFNVGMTIAATDNLTIVPNLSIGMTDD EEECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECEEEEECCCEEEEECCEECCCCC APDFSFSLKFPYYF CCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA