| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458819
Identifier: 77458819
GI number: 77458819
Start: 2973240
End: 2974004
Strand: Reverse
Name: 77458819
Synonym: Pfl01_2594
Alternate gene names: NA
Gene position: 2974004-2973240 (Counterclockwise)
Preceding gene: 77458820
Following gene: 77458818
Centisome position: 46.19
GC content: 60.13
Gene sequence:
>765_bases ATGTCCCGGGAGCAGCAGATGAAAACCTCATACTGGCTGGCCGCCGCCTGCCTGGCAGCGAGCGCGTCAGGCTATGCCAA TGCAGGATTCAAACCCATCGAAATCAAGGACCAGGAGCTCGCCGAGCTACGCGGTCGCTATGTCATGCCGGGCCGGATCA TCAGCTTCGGTGTCGTCATGAGCAGTACCTGGCGCAATGCCAGTGGAGATCTGATCGGGGCATCGGCCACCATGCAATTG CAGGCCGCTTCGGTAAAACCTGAATTCTACGTCTCGACCATCAAGGAACACGGCAACGGCAGTACCCCGGAACTGGGGAC TGGCTCGGTCGTGGGTGGCGCGGCACTCAACTCCAGCCAGGGCGTAACGCAGAGTGTGCGCGCCGCTGGCGATGGCAACG CCGCCTACAACAACGTTGCGATCAACGTCAAAGAAGCCAGTCAGGCACCCGCCCTGGCGCCCACTCAAGGCCAGGCCTTG ATGGCCGGCCAGACCATTTCCGGCAGCAACGGTGCCGGCAGCGTCGCGGTTTCAGCCACAAATGGCGGTGTGCAAATGGC CATTCAGGCCTCCGGCAATCAGGGCACAGCCTTGCAACAGGTCGCCCAGGGCGGACTGCTGCAAAACACCCGCTTGCTGG GTAACGCAAACGTAGTCAACAACCTGACACAACTCAACGTTGTCCTTAACAATAACGGCATGACTGCCGGCGCACTGGAC TGCAACCTGACTCAACTCAGGGCACTACGCAACATCGGATATTGA
Upstream 100 bases:
>100_bases AAGCTGGATGGATTCAACCCGGTCAAAGATGCTGAATTGATGGACTTCGGGTTCATACAGAGCGACTTCTTTTAATCGCC GATTACAAGAGTGGGGCTGG
Downstream 100 bases:
>100_bases ACTACGCTGAGTCTCGATCATTGGGCTTAAAGGGACGGCTTATTCATGTATCGATCAGTATCACTGCGTGCCGCTGTATG TTTGAGTACTCTTCTACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSREQQMKTSYWLAAACLAASASGYANAGFKPIEIKDQELAELRGRYVMPGRIISFGVVMSSTWRNASGDLIGASATMQL QAASVKPEFYVSTIKEHGNGSTPELGTGSVVGGAALNSSQGVTQSVRAAGDGNAAYNNVAINVKEASQAPALAPTQGQAL MAGQTISGSNGAGSVAVSATNGGVQMAIQASGNQGTALQQVAQGGLLQNTRLLGNANVVNNLTQLNVVLNNNGMTAGALD CNLTQLRALRNIGY
Sequences:
>Translated_254_residues MSREQQMKTSYWLAAACLAASASGYANAGFKPIEIKDQELAELRGRYVMPGRIISFGVVMSSTWRNASGDLIGASATMQL QAASVKPEFYVSTIKEHGNGSTPELGTGSVVGGAALNSSQGVTQSVRAAGDGNAAYNNVAINVKEASQAPALAPTQGQAL MAGQTISGSNGAGSVAVSATNGGVQMAIQASGNQGTALQQVAQGGLLQNTRLLGNANVVNNLTQLNVVLNNNGMTAGALD CNLTQLRALRNIGY >Mature_253_residues SREQQMKTSYWLAAACLAASASGYANAGFKPIEIKDQELAELRGRYVMPGRIISFGVVMSSTWRNASGDLIGASATMQLQ AASVKPEFYVSTIKEHGNGSTPELGTGSVVGGAALNSSQGVTQSVRAAGDGNAAYNNVAINVKEASQAPALAPTQGQALM AGQTISGSNGAGSVAVSATNGGVQMAIQASGNQGTALQQVAQGGLLQNTRLLGNANVVNNLTQLNVVLNNNGMTAGALDC NLTQLRALRNIGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25934; Mature: 25803
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREQQMKTSYWLAAACLAASASGYANAGFKPIEIKDQELAELRGRYVMPGRIISFGVVM CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCEECCCCEEEEHEEE SSTWRNASGDLIGASATMQLQAASVKPEFYVSTIKEHGNGSTPELGTGSVVGGAALNSSQ CCCCCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEECCEECCCCC GVTQSVRAAGDGNAAYNNVAINVKEASQAPALAPTQGQALMAGQTISGSNGAGSVAVSAT CCHHHHHHCCCCCCEECEEEEEEECCCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEC NGGVQMAIQASGNQGTALQQVAQGGLLQNTRLLGNANVVNNLTQLNVVLNNNGMTAGALD CCCEEEEEEECCCCCHHHHHHHCCCCEECCEEECCCHHHCCCEEEEEEECCCCCEEEEEC CNLTQLRALRNIGY CCHHHHHHHHHCCC >Mature Secondary Structure SREQQMKTSYWLAAACLAASASGYANAGFKPIEIKDQELAELRGRYVMPGRIISFGVVM CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHCCCEECCCCEEEEHEEE SSTWRNASGDLIGASATMQLQAASVKPEFYVSTIKEHGNGSTPELGTGSVVGGAALNSSQ CCCCCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEECCEECCCCC GVTQSVRAAGDGNAAYNNVAINVKEASQAPALAPTQGQALMAGQTISGSNGAGSVAVSAT CCHHHHHHCCCCCCEECEEEEEEECCCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEC NGGVQMAIQASGNQGTALQQVAQGGLLQNTRLLGNANVVNNLTQLNVVLNNNGMTAGALD CCCEEEEEEECCCCCHHHHHHHCCCCEECCEEECCCHHHCCCEEEEEEECCCCCEEEEEC CNLTQLRALRNIGY CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA