| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is cptA [H]
Identifier: 77458809
GI number: 77458809
Start: 2960951
End: 2962702
Strand: Reverse
Name: cptA [H]
Synonym: Pfl01_2584
Alternate gene names: 77458809
Gene position: 2962702-2960951 (Counterclockwise)
Preceding gene: 77458810
Following gene: 77458808
Centisome position: 46.02
GC content: 59.87
Gene sequence:
>1752_bases ATGGCGGTGTTCAAACGCAGCAAAACGACTGCGACAGGTTTCGACTGGGCCGGTTTCATCTGGCTGTTCGTGTTCTTCTG GTACTTCTCCGGTATCACCCAACTGCTGATCCAGTTGACAGGCACCTCAGGGTTTACCGGGTTCCGCCAGGCTTTCGTGA TGAGCGCTGTGTGGCTCGCGCCGATGCTGCTGTTCCCCAAACGCACCCGAGTGCTCGCCGCGCTGATCGGCGTGGTGCTG TGGGCCTGCTCGATGGCCAGCCTGGGTTACTTCTTCATCTACCAGCAGGAATTTTCCCAGAGCGTGATTTTCATCATGTT CGAGTCGAACGTGTCCGAAGCCGGCGAGTACATGACCCAGTACTTTGCCTGGTGGATGGTCCCGGCGTTCCTCGCGCACA CCGCATTCGCGTATTTCCTGTGGACCCGCCTGCGTCCGGTCTACCTGCCCCGTGGCCGGGCATTTGTTGCCGCCATGGCG ATTCTGGTGGCCGTGATCGGTTATCCGCTGGTCAAGCAGACCATGCGTACCGGCAGCTTCGCCCAAGGCTTCGAGAAATT CGAAACCCGCATCGAGCCGGCCGTACCGTGGCAGATGGCCGTGGCTTATCACCGCTATCAGGAAACCCTGGCCGACATGC AGGGCATGCTGCACAGCGCGAGCAAGATCCCACCGCTGAAAAACCTCAAGGACTCGGGCGCCAACCAGCCGGCGACTCTG GTGCTGGTCATCGGCGAATCCACCAACCGCCAGCGCATGAGCCTCTACGGTTACCCGCGTAAAACCACGCCGGAACTGGA CAAGCTCAAGGATCAGCTGGCGGTCTTCGACAACGTCATCACCCCGCGCCCGTACACCATCGAAGCGCTGCAACAGGTGC TGACCTTCGCCGACGAAGAGAACCCGGACCTGTACCTGTCCACGCCGTCGCTGGTCAGCATGATGAAACAGGCCGGCTAC AAGACGTTCTGGATCACCAACCAGCAGACCATGACCAAGCGCAACACCATGCTCACGACGTTCTCCGAACAGGCCGACGA GCAGGTGTACCTGAACAATAACCGCAACCAGAACGCCGCGCAGTACGACGGCGACGTGATCGAGCCGTTCAACAAGGCGC TGGCCGATGCGGCGCCGCGCAAGTTGATCGTCGTGCATCTGCTCGGTACACACATGAGCTACCAGTACCGTTATCCGCCG AGCTTCGACAAGTTCCAGGATCGCAACGGCGTTCCGGCCGGTGTGCGTGACGATCAGGTGCCGACCTACAACAGCTACGA CAACGCGGTGCTGTACAACGATTTCGTGGTCTCGAGCCTGATCAAGGACTACGCCAAATCCGATCCGAACGGCTTCTTGT TGTACCTCTCCGACCACGGTGAAGACGTGTTCGACTCGGTGGGCCACGGCACTCTGGGTCGCAACGAAAACAAGCCGACG GCGCCGATGTACACCATTCCGTTCATGGCCTGGGCCTCGCCAAAATGGCGGGAAACCCATGACTGGAGCTTCGCCGGGGA TCTGAGCCGCCCTTACAGCAGCTCGCACCTGATCCACACCTGGGCGGATCTGGCCGGTTTGAGTTTCGATGAACTGGATC GCAGCAAGAGCCTGGTCAGCGACAGCTTCAAGCCGCGTCCGCTGTTGATCGGCAATCCTTACGAACGCGAACAGCGGGCA CTGATCGACTTCAGCCTGATGAAGCCAAAAAAACCGGCGGCAGCGACCACGGAAGTGGTGTTGCAGCAGTGA
Upstream 100 bases:
>100_bases ATTCTGGCCGTGCCTGTGTGCACGGCTTCCGTTCGTCGGGTTCATGCGCCGTTGCATGAGGCGCCCGGCGGTGGATGTGA CGACTGAGCTGGAGTGCTGA
Downstream 100 bases:
>100_bases TGAAAAGGGCCGGAAACGGCCCTTTTTTCATACAATCGAAACAGTTTCAAATAACAATATTTCTCGTTTGAGACTAAATC GCACCGCTCGCCTTCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MAVFKRSKTTATGFDWAGFIWLFVFFWYFSGITQLLIQLTGTSGFTGFRQAFVMSAVWLAPMLLFPKRTRVLAALIGVVL WACSMASLGYFFIYQQEFSQSVIFIMFESNVSEAGEYMTQYFAWWMVPAFLAHTAFAYFLWTRLRPVYLPRGRAFVAAMA ILVAVIGYPLVKQTMRTGSFAQGFEKFETRIEPAVPWQMAVAYHRYQETLADMQGMLHSASKIPPLKNLKDSGANQPATL VLVIGESTNRQRMSLYGYPRKTTPELDKLKDQLAVFDNVITPRPYTIEALQQVLTFADEENPDLYLSTPSLVSMMKQAGY KTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNAAQYDGDVIEPFNKALADAAPRKLIVVHLLGTHMSYQYRYPP SFDKFQDRNGVPAGVRDDQVPTYNSYDNAVLYNDFVVSSLIKDYAKSDPNGFLLYLSDHGEDVFDSVGHGTLGRNENKPT APMYTIPFMAWASPKWRETHDWSFAGDLSRPYSSSHLIHTWADLAGLSFDELDRSKSLVSDSFKPRPLLIGNPYEREQRA LIDFSLMKPKKPAAATTEVVLQQ
Sequences:
>Translated_583_residues MAVFKRSKTTATGFDWAGFIWLFVFFWYFSGITQLLIQLTGTSGFTGFRQAFVMSAVWLAPMLLFPKRTRVLAALIGVVL WACSMASLGYFFIYQQEFSQSVIFIMFESNVSEAGEYMTQYFAWWMVPAFLAHTAFAYFLWTRLRPVYLPRGRAFVAAMA ILVAVIGYPLVKQTMRTGSFAQGFEKFETRIEPAVPWQMAVAYHRYQETLADMQGMLHSASKIPPLKNLKDSGANQPATL VLVIGESTNRQRMSLYGYPRKTTPELDKLKDQLAVFDNVITPRPYTIEALQQVLTFADEENPDLYLSTPSLVSMMKQAGY KTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNAAQYDGDVIEPFNKALADAAPRKLIVVHLLGTHMSYQYRYPP SFDKFQDRNGVPAGVRDDQVPTYNSYDNAVLYNDFVVSSLIKDYAKSDPNGFLLYLSDHGEDVFDSVGHGTLGRNENKPT APMYTIPFMAWASPKWRETHDWSFAGDLSRPYSSSHLIHTWADLAGLSFDELDRSKSLVSDSFKPRPLLIGNPYEREQRA LIDFSLMKPKKPAAATTEVVLQQ >Mature_582_residues AVFKRSKTTATGFDWAGFIWLFVFFWYFSGITQLLIQLTGTSGFTGFRQAFVMSAVWLAPMLLFPKRTRVLAALIGVVLW ACSMASLGYFFIYQQEFSQSVIFIMFESNVSEAGEYMTQYFAWWMVPAFLAHTAFAYFLWTRLRPVYLPRGRAFVAAMAI LVAVIGYPLVKQTMRTGSFAQGFEKFETRIEPAVPWQMAVAYHRYQETLADMQGMLHSASKIPPLKNLKDSGANQPATLV LVIGESTNRQRMSLYGYPRKTTPELDKLKDQLAVFDNVITPRPYTIEALQQVLTFADEENPDLYLSTPSLVSMMKQAGYK TFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNAAQYDGDVIEPFNKALADAAPRKLIVVHLLGTHMSYQYRYPPS FDKFQDRNGVPAGVRDDQVPTYNSYDNAVLYNDFVVSSLIKDYAKSDPNGFLLYLSDHGEDVFDSVGHGTLGRNENKPTA PMYTIPFMAWASPKWRETHDWSFAGDLSRPYSSSHLIHTWADLAGLSFDELDRSKSLVSDSFKPRPLLIGNPYEREQRAL IDFSLMKPKKPAAATTEVVLQQ
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the outer membrane lipopolysaccharide core [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. CptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790392, Length=559, Percent_Identity=53.6672629695885, Blast_Score=635, Evalue=0.0, Organism=Escherichia coli, GI87082223, Length=536, Percent_Identity=24.8134328358209, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI87082286, Length=273, Percent_Identity=29.6703296703297, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87082372, Length=241, Percent_Identity=26.9709543568465, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 66334; Mature: 66202
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFKRSKTTATGFDWAGFIWLFVFFWYFSGITQLLIQLTGTSGFTGFRQAFVMSAVWLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH PMLLFPKRTRVLAALIGVVLWACSMASLGYFFIYQQEFSQSVIFIMFESNVSEAGEYMTQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCEEEEEEECCHHHHHHHHHH YFAWWMVPAFLAHTAFAYFLWTRLRPVYLPRGRAFVAAMAILVAVIGYPLVKQTMRTGSF HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQGFEKFETRIEPAVPWQMAVAYHRYQETLADMQGMLHSASKIPPLKNLKDSGANQPATL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEE VLVIGESTNRQRMSLYGYPRKTTPELDKLKDQLAVFDNVITPRPYTIEALQQVLTFADEE EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC NPDLYLSTPSLVSMMKQAGYKTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNAA CCCEEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHEEEHHHCCCCEEEECCCCCCCCH QYDGDVIEPFNKALADAAPRKLIVVHLLGTHMSYQYRYPPSFDKFQDRNGVPAGVRDDQV HCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHCCCCCCCCCCCCCCC PTYNSYDNAVLYNDFVVSSLIKDYAKSDPNGFLLYLSDHGEDVFDSVGHGTLGRNENKPT CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCC APMYTIPFMAWASPKWRETHDWSFAGDLSRPYSSSHLIHTWADLAGLSFDELDRSKSLVS CCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH DSFKPRPLLIGNPYEREQRALIDFSLMKPKKPAAATTEVVLQQ CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure AVFKRSKTTATGFDWAGFIWLFVFFWYFSGITQLLIQLTGTSGFTGFRQAFVMSAVWLA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH PMLLFPKRTRVLAALIGVVLWACSMASLGYFFIYQQEFSQSVIFIMFESNVSEAGEYMTQ HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCEEEEEEECCHHHHHHHHHH YFAWWMVPAFLAHTAFAYFLWTRLRPVYLPRGRAFVAAMAILVAVIGYPLVKQTMRTGSF HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQGFEKFETRIEPAVPWQMAVAYHRYQETLADMQGMLHSASKIPPLKNLKDSGANQPATL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEE VLVIGESTNRQRMSLYGYPRKTTPELDKLKDQLAVFDNVITPRPYTIEALQQVLTFADEE EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC NPDLYLSTPSLVSMMKQAGYKTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNAA CCCEEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHEEEHHHCCCCEEEECCCCCCCCH QYDGDVIEPFNKALADAAPRKLIVVHLLGTHMSYQYRYPPSFDKFQDRNGVPAGVRDDQV HCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHCCCCCCCCCCCCCCC PTYNSYDNAVLYNDFVVSSLIKDYAKSDPNGFLLYLSDHGEDVFDSVGHGTLGRNENKPT CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCC APMYTIPFMAWASPKWRETHDWSFAGDLSRPYSSSHLIHTWADLAGLSFDELDRSKSLVS CCEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH DSFKPRPLLIGNPYEREQRALIDFSLMKPKKPAAATTEVVLQQ CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]