| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fpvA [H]
Identifier: 77458808
GI number: 77458808
Start: 2958560
End: 2960806
Strand: Reverse
Name: fpvA [H]
Synonym: Pfl01_2583
Alternate gene names: 77458808
Gene position: 2960806-2958560 (Counterclockwise)
Preceding gene: 77458809
Following gene: 77458807
Centisome position: 45.99
GC content: 60.79
Gene sequence:
>2247_bases ATGTTCGCGCCCATCACCCGTTCCATGACCCTCACCCTGGGCCTGTGCAGCGTTGCATTGAGCCCGGATCTGCTGGCTGA AACCGACACAGAAAAACAGTTGCCCCCCGCTACACCGGCGCTGGAGCTGGCCTCCACGAACATCACCGCCCAAGGCCTGG GCAGCACCACTGAAAACACCCACGCCTACACCACCAGTGCCATGAGCACGGCAACGCGGTTGAACCTGTCGTTCAAGGAA ACCCCGCAGTCAGTGTCTGTGGTCACTCGTCAGCAGATGGATGATTTCAAGCTCGGTACATTGACCGAGGCCATGAGCCA GACCACCGGCGTCGTGGTGCAGCACTACGACTCGGATCGGGTCAACTATTCATCCCGTGGCTACTCGATCAACAACTTTC AGGTTGACGGGATGCTCAACACTTTCAGCCGAATGAAGTCCGATTCCGACACGATCATCTACGACCGGATCGAAGTGGTA CGGGGCGCCACCGGCCTGACCACCGGCGCAGGTGATCCTTCTGCCACCATCAACATGGTGCGCAAACGCCCCACCGCGCA GTTGCAGGCGCTGGCCGGCGTCAGCGGCGGCAGTTATGACGATTACTACAGTTACGTGGACGTGGGTGGTCCGCTTGCCT TCGATGGCCGTTTGCGCGGCCGCAGCGTGCTGGCCTATCGCGACAGCCAGTCGATTCGCGACCACTACGCGCTGCAACGG GAAGTCGGGTACGGCATCCTCGAGGCCGATCTGACAGAGTCGACCGTGCTGGCTGTCGGCTACGACTACCAGGACAAGCA AGTACAAGGCAGCTCCTGGGGCACTGTGCCGTACTGGAACGCCGACGGTGGCAAGGCGCGCCTCGGCCGCTCGACCAACA TGGCGACGTCGTGGAGCTCTTGGCCGATCAAGGACAAGACAGCATTCGCCACCCTCGATCAGGCGCTGGCGGGCGGCTGG CACCTGAAAGCGGCCTACACCCATCGCCAGAGCGATACCGACGGCAAGGTCTACTACGGCGGAACCGGTTTCCCCGCGGA CGACCGCAGCGGGATGGCAGCCTACATGTCGCATATGATCGGCACGCAGAAGATGAAGACTTACGACTTCAACGTGTCGG GCCCCTATGCGCTGTTCGGTCGCGAACACGAAATGATGTTCGGATATGGCGAAGCCGAGCGCAGCGAGCGCTCCCCTTAT ACGATCGACGGCCCGGTGCCGCCGGGTTACGGACGGATCCGCGACTGGAAATACATGGGCGATATCGCCAGATTCCCCGA CACCGTCACAGGCTTGACCGGCTCCACCTCCAGCACCCGCCAGAAAGCCGGTTACCTGGCCACACGCCTGAGTTTCACCG ACGACTTGCACGCGGTACTCGGCAGCCGTTACGGCAGCTGGAAAGCGTCAAAAGCCGACAATACGTTTGACGACAAGCTG CAAGTGAGCGCTGTCGACGCGAGCCGCCAGCAACACAACGACATGTGGACGCCGTACGCGGGACTGCTCTACGACCTGAC GCCCGAGTACACCGTGTACGCCAGCTACACCGACATTTTCAACCCTCAGGATTACCGCGATGCCAATCGCAAATTCCTTG AGCCGGTCGTCGGCAGCAACTATGAAATAGGCCTCAAGGGCAGCCTGCTCGACGAGCGCCTGAACCTGGCCACGGCCGTG TTCTGGAGCAAACAGGACAATGTCGCCGAAGTTGATGATTCGGTATTACCGGATCCGGTCACCGGTGAGGAGTTCTACAA GTCGGGCGGCAAAGGCAACAAGGTCAACGGTTTCGAAGCCGAGGTTTCGGGTGAAATCCTGGATGGCTGGAACATGACCG CCGGCTACACCTACACCCACTCGGCCAACGGCGAGAAACAACGCAGCAACACCAACCAGCCGTTGAACATGTTGCGCCTC TCCACGGCCTATCGCCTGCCCGGCAACTGGAATGCCCTGACCGTGGGCGGCGCCGTGAGCTGGCAGAGTGACGTCTATGG CAATTCCAATCGCCCGGTCGGGCGCGGTGCCAATGGGCGGGTCATCACCGAACGGACCCGGATCAGTCAGGGCGCTTACT CCGTGGTCAAGCTGATGTCGCGCTACGAGTTCGACAAACACCTGTCGGCGTCCCTCAACGTCGACAACCTGTTCGACAAG AAGTATTACGACAACGTCGGCTTCTACAACGGCGTGTTCTGGGGCGATCCTCGAACCGTGACGCTGGGCCTCGACTGGAA ACTCTGA
Upstream 100 bases:
>100_bases TTTCAAATAACAATATTTCTCGTTTGAGACTAAATCGCACCGCTCGCCTTCGTCTTTGAGCAAAAGGAATTTTTCCCTCG AAGACAAGGAGTCGGCTGCG
Downstream 100 bases:
>100_bases CGCCCTTCCCTTGCGATCTGCACGCGTCATTCACGCGTGCAGCGCTTGTCCGATACGCCGTGGAAACACCCGGTAAAACC TAAACTGAACGAGCGTTAAC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MFAPITRSMTLTLGLCSVALSPDLLAETDTEKQLPPATPALELASTNITAQGLGSTTENTHAYTTSAMSTATRLNLSFKE TPQSVSVVTRQQMDDFKLGTLTEAMSQTTGVVVQHYDSDRVNYSSRGYSINNFQVDGMLNTFSRMKSDSDTIIYDRIEVV RGATGLTTGAGDPSATINMVRKRPTAQLQALAGVSGGSYDDYYSYVDVGGPLAFDGRLRGRSVLAYRDSQSIRDHYALQR EVGYGILEADLTESTVLAVGYDYQDKQVQGSSWGTVPYWNADGGKARLGRSTNMATSWSSWPIKDKTAFATLDQALAGGW HLKAAYTHRQSDTDGKVYYGGTGFPADDRSGMAAYMSHMIGTQKMKTYDFNVSGPYALFGREHEMMFGYGEAERSERSPY TIDGPVPPGYGRIRDWKYMGDIARFPDTVTGLTGSTSSTRQKAGYLATRLSFTDDLHAVLGSRYGSWKASKADNTFDDKL QVSAVDASRQQHNDMWTPYAGLLYDLTPEYTVYASYTDIFNPQDYRDANRKFLEPVVGSNYEIGLKGSLLDERLNLATAV FWSKQDNVAEVDDSVLPDPVTGEEFYKSGGKGNKVNGFEAEVSGEILDGWNMTAGYTYTHSANGEKQRSNTNQPLNMLRL STAYRLPGNWNALTVGGAVSWQSDVYGNSNRPVGRGANGRVITERTRISQGAYSVVKLMSRYEFDKHLSASLNVDNLFDK KYYDNVGFYNGVFWGDPRTVTLGLDWKL
Sequences:
>Translated_748_residues MFAPITRSMTLTLGLCSVALSPDLLAETDTEKQLPPATPALELASTNITAQGLGSTTENTHAYTTSAMSTATRLNLSFKE TPQSVSVVTRQQMDDFKLGTLTEAMSQTTGVVVQHYDSDRVNYSSRGYSINNFQVDGMLNTFSRMKSDSDTIIYDRIEVV RGATGLTTGAGDPSATINMVRKRPTAQLQALAGVSGGSYDDYYSYVDVGGPLAFDGRLRGRSVLAYRDSQSIRDHYALQR EVGYGILEADLTESTVLAVGYDYQDKQVQGSSWGTVPYWNADGGKARLGRSTNMATSWSSWPIKDKTAFATLDQALAGGW HLKAAYTHRQSDTDGKVYYGGTGFPADDRSGMAAYMSHMIGTQKMKTYDFNVSGPYALFGREHEMMFGYGEAERSERSPY TIDGPVPPGYGRIRDWKYMGDIARFPDTVTGLTGSTSSTRQKAGYLATRLSFTDDLHAVLGSRYGSWKASKADNTFDDKL QVSAVDASRQQHNDMWTPYAGLLYDLTPEYTVYASYTDIFNPQDYRDANRKFLEPVVGSNYEIGLKGSLLDERLNLATAV FWSKQDNVAEVDDSVLPDPVTGEEFYKSGGKGNKVNGFEAEVSGEILDGWNMTAGYTYTHSANGEKQRSNTNQPLNMLRL STAYRLPGNWNALTVGGAVSWQSDVYGNSNRPVGRGANGRVITERTRISQGAYSVVKLMSRYEFDKHLSASLNVDNLFDK KYYDNVGFYNGVFWGDPRTVTLGLDWKL >Mature_748_residues MFAPITRSMTLTLGLCSVALSPDLLAETDTEKQLPPATPALELASTNITAQGLGSTTENTHAYTTSAMSTATRLNLSFKE TPQSVSVVTRQQMDDFKLGTLTEAMSQTTGVVVQHYDSDRVNYSSRGYSINNFQVDGMLNTFSRMKSDSDTIIYDRIEVV RGATGLTTGAGDPSATINMVRKRPTAQLQALAGVSGGSYDDYYSYVDVGGPLAFDGRLRGRSVLAYRDSQSIRDHYALQR EVGYGILEADLTESTVLAVGYDYQDKQVQGSSWGTVPYWNADGGKARLGRSTNMATSWSSWPIKDKTAFATLDQALAGGW HLKAAYTHRQSDTDGKVYYGGTGFPADDRSGMAAYMSHMIGTQKMKTYDFNVSGPYALFGREHEMMFGYGEAERSERSPY TIDGPVPPGYGRIRDWKYMGDIARFPDTVTGLTGSTSSTRQKAGYLATRLSFTDDLHAVLGSRYGSWKASKADNTFDDKL QVSAVDASRQQHNDMWTPYAGLLYDLTPEYTVYASYTDIFNPQDYRDANRKFLEPVVGSNYEIGLKGSLLDERLNLATAV FWSKQDNVAEVDDSVLPDPVTGEEFYKSGGKGNKVNGFEAEVSGEILDGWNMTAGYTYTHSANGEKQRSNTNQPLNMLRL STAYRLPGNWNALTVGGAVSWQSDVYGNSNRPVGRGANGRVITERTRISQGAYSVVKLMSRYEFDKHLSASLNVDNLFDK KYYDNVGFYNGVFWGDPRTVTLGLDWKL
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=747, Percent_Identity=34.136546184739, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82451; Mature: 82451
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAPITRSMTLTLGLCSVALSPDLLAETDTEKQLPPATPALELASTNITAQGLGSTTENT CCCCCCCCEEEEEEHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCC HAYTTSAMSTATRLNLSFKETPQSVSVVTRQQMDDFKLGTLTEAMSQTTGVVVQHYDSDR EEEEHHHHHHEEEEEEEHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCC VNYSSRGYSINNFQVDGMLNTFSRMKSDSDTIIYDRIEVVRGATGLTTGAGDPSATINMV CCCCCCCEEECCEEECCHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHH RKRPTAQLQALAGVSGGSYDDYYSYVDVGGPLAFDGRLRGRSVLAYRDSQSIRDHYALQR HCCCHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCCCCCEEEEECCCHHHHHHHHHHH EVGYGILEADLTESTVLAVGYDYQDKQVQGSSWGTVPYWNADGGKARLGRSTNMATSWSS HHCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCEEECCCCCCEECCCCCCCCCCCCC WPIKDKTAFATLDQALAGGWHLKAAYTHRQSDTDGKVYYGGTGFPADDRSGMAAYMSHMI CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH GTQKMKTYDFNVSGPYALFGREHEMMFGYGEAERSERSPYTIDGPVPPGYGRIRDWKYMG CCCCEEEEEECCCCCEEEECCCEEEEEECCCHHHCCCCCEEECCCCCCCCCCCCCHHHHH DIARFPDTVTGLTGSTSSTRQKAGYLATRLSFTDDLHAVLGSRYGSWKASKADNTFDDKL HHHHCCCHHCCCCCCCCCHHHHHCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCE QVSAVDASRQQHNDMWTPYAGLLYDLTPEYTVYASYTDIFNPQDYRDANRKFLEPVVGSN EEEEECCHHHHCCCCCCCHHHHEEECCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCC YEIGLKGSLLDERLNLATAVFWSKQDNVAEVDDSVLPDPVTGEEFYKSGGKGNKVNGFEA EEEEECCCHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEE EVSGEILDGWNMTAGYTYTHSANGEKQRSNTNQPLNMLRLSTAYRLPGNWNALTVGGAVS EECCEEECCCCCCCCEEEEECCCCCHHCCCCCCCHHHEEEEHEEECCCCCCEEEECCEEE WQSDVYGNSNRPVGRGANGRVITERTRISQGAYSVVKLMSRYEFDKHLSASLNVDNLFDK ECCCCCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHH KYYDNVGFYNGVFWGDPRTVTLGLDWKL HHHCCCCCCCCEEECCCEEEEEEEEECC >Mature Secondary Structure MFAPITRSMTLTLGLCSVALSPDLLAETDTEKQLPPATPALELASTNITAQGLGSTTENT CCCCCCCCEEEEEEHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCC HAYTTSAMSTATRLNLSFKETPQSVSVVTRQQMDDFKLGTLTEAMSQTTGVVVQHYDSDR EEEEHHHHHHEEEEEEEHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCC VNYSSRGYSINNFQVDGMLNTFSRMKSDSDTIIYDRIEVVRGATGLTTGAGDPSATINMV CCCCCCCEEECCEEECCHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHHHHH RKRPTAQLQALAGVSGGSYDDYYSYVDVGGPLAFDGRLRGRSVLAYRDSQSIRDHYALQR HCCCHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCCCCCEEEEECCCHHHHHHHHHHH EVGYGILEADLTESTVLAVGYDYQDKQVQGSSWGTVPYWNADGGKARLGRSTNMATSWSS HHCCEEEECCCCCCEEEEEECCCCCCEECCCCCCCCEEECCCCCCEECCCCCCCCCCCCC WPIKDKTAFATLDQALAGGWHLKAAYTHRQSDTDGKVYYGGTGFPADDRSGMAAYMSHMI CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH GTQKMKTYDFNVSGPYALFGREHEMMFGYGEAERSERSPYTIDGPVPPGYGRIRDWKYMG CCCCEEEEEECCCCCEEEECCCEEEEEECCCHHHCCCCCEEECCCCCCCCCCCCCHHHHH DIARFPDTVTGLTGSTSSTRQKAGYLATRLSFTDDLHAVLGSRYGSWKASKADNTFDDKL HHHHCCCHHCCCCCCCCCHHHHHCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCE QVSAVDASRQQHNDMWTPYAGLLYDLTPEYTVYASYTDIFNPQDYRDANRKFLEPVVGSN EEEEECCHHHHCCCCCCCHHHHEEECCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCC YEIGLKGSLLDERLNLATAVFWSKQDNVAEVDDSVLPDPVTGEEFYKSGGKGNKVNGFEA EEEEECCCHHHHHHHHEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEE EVSGEILDGWNMTAGYTYTHSANGEKQRSNTNQPLNMLRLSTAYRLPGNWNALTVGGAVS EECCEEECCCCCCCCEEEEECCCCCHHCCCCCCCHHHEEEEHEEECCCCCCEEEECCEEE WQSDVYGNSNRPVGRGANGRVITERTRISQGAYSVVKLMSRYEFDKHLSASLNVDNLFDK ECCCCCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHH KYYDNVGFYNGVFWGDPRTVTLGLDWKL HHHCCCCCCCCEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]