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The map label for this gene is oxyR [H]

Identifier: 77458799

GI number: 77458799

Start: 2951477

End: 2952439

Strand: Reverse

Name: oxyR [H]

Synonym: Pfl01_2574

Alternate gene names: 77458799

Gene position: 2952439-2951477 (Counterclockwise)

Preceding gene: 77458807

Following gene: 77458798

Centisome position: 45.86

GC content: 60.12

Gene sequence:

>963_bases
ATGCGCCGTCGGATACATTCGAGAAATATCAAGTTTGTTAACCTGACTTTATCCCGGATTAATGTGATGCTCGGTCAACT
CCACGATGTCGATCTTCAGCTTTTACGGCTGTTTCTCGGCGTGGTCGAAGCCAATGGCTTCAGCGCGGCGCAGGGTGAAC
TGGGGCTGAGCCAGTCGAGCATCAGCCAGCAAATGGCCAAGCTGGAAACCCGCCTCGGCTACCGGGTGTGCAACCGGGGC
AAGGGCGGCTTCAGCCTGACACCCAAGGGCGAGCAACTGTTGATTGCCGCCCGGGCACTGTTCGATTCGATCGAAAGCTT
CCGCCATCAATCCAACGGCGTCGCCGGGCGCTTGATCGGCGAAGTGCGGCTGGGTCTGTCGGAAGCGGTGGACCAATCGG
TGCTGCAACGGGTGGCCGATGCGATCCGGCGTTTTCGCAAACGGGACGAATCGGTACGGATCGAGCTGATCAGCGCCATG
CCCGGCGAAATGGAGCGTCTGTTGCTGCAACAGCGGCTGGACCTGGCCATCGGCTATTTCTCCCAGGTGCAGAGCGCGTT
CGATTACCGCGAACTGTTCAGCGAAACCCAGCATCTGTACTGCGCGCCCGGCCATCCGCTGTTCGCCGACGAGGAGCCCG
ATGATGCGGCGTTGCAGGCCTGCGACCGGGTCGATCACCCGTACAGGTTTCTGCGCAGTGACGAGCCGTTTCAGGGCAAG
GTCTGTTCCGCACGCTCGGAACAGGTGGAAGGCACCCTCGCCTTCATTCTGTCAGGCAAACACATCGGTTATCTGCCCAA
CCATTACGCCCGCCAATGGCAGGACAAGGGCCTGTTGCGACCGGTGCGCGAAGGCGAATTGAGCTTTGACGTGGCGTTCC
ATCTGGCCCGGCATCGGGCGCAGGTGCCCGGCGATGCGCAGAAGGCTTTTGAAGAAGATTTGCTGTCAGCCTTTCAAACC
TGA

Upstream 100 bases:

>100_bases
CGGCCTGGGCGGCGATGGAGACGGTAAGTAATAAAGCGGGCAAACACAGCTTGAAGACGGGAGCCATGACGAACACCTGA
CTAAAGGAAGTGGTGGCAGG

Downstream 100 bases:

>100_bases
GTTCTAAAGAGCGCGACTACAAGGAATGTCTCCATGCTGCAGACCGCTCAAATGATTCGACTCAAAAAACGACGTAACGC
AGATTGATCATTTTCAGGAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRRRIHSRNIKFVNLTLSRINVMLGQLHDVDLQLLRLFLGVVEANGFSAAQGELGLSQSSISQQMAKLETRLGYRVCNRG
KGGFSLTPKGEQLLIAARALFDSIESFRHQSNGVAGRLIGEVRLGLSEAVDQSVLQRVADAIRRFRKRDESVRIELISAM
PGEMERLLLQQRLDLAIGYFSQVQSAFDYRELFSETQHLYCAPGHPLFADEEPDDAALQACDRVDHPYRFLRSDEPFQGK
VCSARSEQVEGTLAFILSGKHIGYLPNHYARQWQDKGLLRPVREGELSFDVAFHLARHRAQVPGDAQKAFEEDLLSAFQT

Sequences:

>Translated_320_residues
MRRRIHSRNIKFVNLTLSRINVMLGQLHDVDLQLLRLFLGVVEANGFSAAQGELGLSQSSISQQMAKLETRLGYRVCNRG
KGGFSLTPKGEQLLIAARALFDSIESFRHQSNGVAGRLIGEVRLGLSEAVDQSVLQRVADAIRRFRKRDESVRIELISAM
PGEMERLLLQQRLDLAIGYFSQVQSAFDYRELFSETQHLYCAPGHPLFADEEPDDAALQACDRVDHPYRFLRSDEPFQGK
VCSARSEQVEGTLAFILSGKHIGYLPNHYARQWQDKGLLRPVREGELSFDVAFHLARHRAQVPGDAQKAFEEDLLSAFQT
>Mature_320_residues
MRRRIHSRNIKFVNLTLSRINVMLGQLHDVDLQLLRLFLGVVEANGFSAAQGELGLSQSSISQQMAKLETRLGYRVCNRG
KGGFSLTPKGEQLLIAARALFDSIESFRHQSNGVAGRLIGEVRLGLSEAVDQSVLQRVADAIRRFRKRDESVRIELISAM
PGEMERLLLQQRLDLAIGYFSQVQSAFDYRELFSETQHLYCAPGHPLFADEEPDDAALQACDRVDHPYRFLRSDEPFQGK
VCSARSEQVEGTLAFILSGKHIGYLPNHYARQWQDKGLLRPVREGELSFDVAFHLARHRAQVPGDAQKAFEEDLLSAFQT

Specific function: Required for the induction the katG gene for catalase. Involved in the response to hydrogen peroxide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788887, Length=216, Percent_Identity=26.8518518518519, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787601, Length=179, Percent_Identity=24.0223463687151, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1786401, Length=245, Percent_Identity=25.7142857142857, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36111; Mature: 36111

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRIHSRNIKFVNLTLSRINVMLGQLHDVDLQLLRLFLGVVEANGFSAAQGELGLSQSS
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ISQQMAKLETRLGYRVCNRGKGGFSLTPKGEQLLIAARALFDSIESFRHQSNGVAGRLIG
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVRLGLSEAVDQSVLQRVADAIRRFRKRDESVRIELISAMPGEMERLLLQQRLDLAIGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHH
SQVQSAFDYRELFSETQHLYCAPGHPLFADEEPDDAALQACDRVDHPYRFLRSDEPFQGK
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
VCSARSEQVEGTLAFILSGKHIGYLPNHYARQWQDKGLLRPVREGELSFDVAFHLARHRA
HHCCHHHHHHHEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHH
QVPGDAQKAFEEDLLSAFQT
CCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRRIHSRNIKFVNLTLSRINVMLGQLHDVDLQLLRLFLGVVEANGFSAAQGELGLSQSS
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ISQQMAKLETRLGYRVCNRGKGGFSLTPKGEQLLIAARALFDSIESFRHQSNGVAGRLIG
HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVRLGLSEAVDQSVLQRVADAIRRFRKRDESVRIELISAMPGEMERLLLQQRLDLAIGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHH
SQVQSAFDYRELFSETQHLYCAPGHPLFADEEPDDAALQACDRVDHPYRFLRSDEPFQGK
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
VCSARSEQVEGTLAFILSGKHIGYLPNHYARQWQDKGLLRPVREGELSFDVAFHLARHRA
HHCCHHHHHHHEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHH
QVPGDAQKAFEEDLLSAFQT
CCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9733688 [H]