| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458778
Identifier: 77458778
GI number: 77458778
Start: 2923926
End: 2924444
Strand: Reverse
Name: 77458778
Synonym: Pfl01_2553
Alternate gene names: NA
Gene position: 2924444-2923926 (Counterclockwise)
Preceding gene: 77458779
Following gene: 77458777
Centisome position: 45.42
GC content: 60.5
Gene sequence:
>519_bases ATGCCAGGCAGGAAAATCCGGTCAAAATGCCCTCCTTTTTTGACCGTTCCTCCTTCGAGCCGAGAGCCCTCCATGCGAAA CCATCTGCGTCTGGCCGCCCTGAGCGCCCTGTTCATTTCCTCCCTGGCGCAAGCCGCCGACCTTATCCCGATCGAAGTCC ACCGCGACGCCAACTGTGGCTGCTGCAAAAAGTGGATCAGCCACCTGGAAGCCAACGGCTTCAAGGTTGAAGACCACGTC GAAAGCGACATGAGCAGCTTCAAGCAACAACACGGCGTTCCGCCACGTCTGGCGTCCTGCCACACCGCGATCATCAACGG CAAATTCGTCGAAGGCCATGTGCCGGCGGAACAGGTGCTGGCCCTGAGCAAGCGTGACGACCTGCTGGGCGTTGCCGCAC CGGGCATGCCGATGGGCTCGCCGGGCATGGAAATGGACGGCATGAGCGATGCGTATCAAGTGATCGGCCTGAAGAAAGAC GGTGCCGATGTGGTGGTGGCGGATTACCCGGCCCATTGA
Upstream 100 bases:
>100_bases TGCGCTGACAGTTTTGTCATCTTGCGCTCAGTGGCCTGTCAGCTTTGATCTACGATCATGTTGGCAGGCCTGCCTCGTAT CACTTGGAAACACTCCGTTG
Downstream 100 bases:
>100_bases TGACGGCGGGTTATCTCGGGCTGTTCCTGGCCGCGTTTGGCGCGGCGACGCTGTTGCCGCTGCAATCGGAAGCCGTACTG GTCGGGCTGCTGGTCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPGRKIRSKCPPFLTVPPSSREPSMRNHLRLAALSALFISSLAQAADLIPIEVHRDANCGCCKKWISHLEANGFKVEDHV ESDMSSFKQQHGVPPRLASCHTAIINGKFVEGHVPAEQVLALSKRDDLLGVAAPGMPMGSPGMEMDGMSDAYQVIGLKKD GADVVVADYPAH
Sequences:
>Translated_172_residues MPGRKIRSKCPPFLTVPPSSREPSMRNHLRLAALSALFISSLAQAADLIPIEVHRDANCGCCKKWISHLEANGFKVEDHV ESDMSSFKQQHGVPPRLASCHTAIINGKFVEGHVPAEQVLALSKRDDLLGVAAPGMPMGSPGMEMDGMSDAYQVIGLKKD GADVVVADYPAH >Mature_171_residues PGRKIRSKCPPFLTVPPSSREPSMRNHLRLAALSALFISSLAQAADLIPIEVHRDANCGCCKKWISHLEANGFKVEDHVE SDMSSFKQQHGVPPRLASCHTAIINGKFVEGHVPAEQVLALSKRDDLLGVAAPGMPMGSPGMEMDGMSDAYQVIGLKKDG ADVVVADYPAH
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18524; Mature: 18392
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRKIRSKCPPFLTVPPSSREPSMRNHLRLAALSALFISSLAQAADLIPIEVHRDANCG CCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCH CCKKWISHLEANGFKVEDHVESDMSSFKQQHGVPPRLASCHTAIINGKFVEGHVPAEQVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCHHHHH ALSKRDDLLGVAAPGMPMGSPGMEMDGMSDAYQVIGLKKDGADVVVADYPAH HHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEEEECCCCC >Mature Secondary Structure PGRKIRSKCPPFLTVPPSSREPSMRNHLRLAALSALFISSLAQAADLIPIEVHRDANCG CCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCH CCKKWISHLEANGFKVEDHVESDMSSFKQQHGVPPRLASCHTAIINGKFVEGHVPAEQVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCHHHHH ALSKRDDLLGVAAPGMPMGSPGMEMDGMSDAYQVIGLKKDGADVVVADYPAH HHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA