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The map label for this gene is yqaA [H]

Identifier: 77458777

GI number: 77458777

Start: 2923492

End: 2923926

Strand: Reverse

Name: yqaA [H]

Synonym: Pfl01_2552

Alternate gene names: 77458777

Gene position: 2923926-2923492 (Counterclockwise)

Preceding gene: 77458778

Following gene: 77458776

Centisome position: 45.41

GC content: 64.14

Gene sequence:

>435_bases
ATGACGGCGGGTTATCTCGGGCTGTTCCTGGCCGCGTTTGGCGCGGCGACGCTGTTGCCGCTGCAATCGGAAGCCGTACT
GGTCGGGCTGCTGGTCAGCGATCGTTACTGGCTGTGGGGGCTGCTGGCCGTAGCGACGCTAGGCAATGTCCTCGGTTCGC
TGGTGAACTGGTGGCTGGGGCGCGGTCTGGAACGGTTTCAGGATCGGCGCTGGTTTCCGGTCAGTCCGAAGCACATGGCG
CGCGCCCGTGTTCATTACCAGCGCTACGGTCACTGGTCGTTGCTGCTCAGCTGGTTGCCGGTCATTGGCGATCCGCTGAC
GTTGATCGCCGGGGTCATGCGCGAACCTCTCGGACGTTTTCTGTTGATCGTCACTCTCGCCAAAGGCGCCCGCTACGGGG
TGCTGGCGATGCTCACCCTCGGCTGGCTCGGTTGA

Upstream 100 bases:

>100_bases
CGCCGGGCATGGAAATGGACGGCATGAGCGATGCGTATCAAGTGATCGGCCTGAAGAAAGACGGTGCCGATGTGGTGGTG
GCGGATTACCCGGCCCATTG

Downstream 100 bases:

>100_bases
ACGATCGGGCCCAAGGATTGCCTGTGTTTAACGTCGCCCTAATCCGGCCGTTCCAGCATCGGCCGATTTCTTGTGGAGTT
GTCCTATGTCTGTATCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTAGYLGLFLAAFGAATLLPLQSEAVLVGLLVSDRYWLWGLLAVATLGNVLGSLVNWWLGRGLERFQDRRWFPVSPKHMA
RARVHYQRYGHWSLLLSWLPVIGDPLTLIAGVMREPLGRFLLIVTLAKGARYGVLAMLTLGWLG

Sequences:

>Translated_144_residues
MTAGYLGLFLAAFGAATLLPLQSEAVLVGLLVSDRYWLWGLLAVATLGNVLGSLVNWWLGRGLERFQDRRWFPVSPKHMA
RARVHYQRYGHWSLLLSWLPVIGDPLTLIAGVMREPLGRFLLIVTLAKGARYGVLAMLTLGWLG
>Mature_143_residues
TAGYLGLFLAAFGAATLLPLQSEAVLVGLLVSDRYWLWGLLAVATLGNVLGSLVNWWLGRGLERFQDRRWFPVSPKHMAR
ARVHYQRYGHWSLLLSWLPVIGDPLTLIAGVMREPLGRFLLIVTLAKGARYGVLAMLTLGWLG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=135, Percent_Identity=41.4814814814815, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16029; Mature: 15898

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGYLGLFLAAFGAATLLPLQSEAVLVGLLVSDRYWLWGLLAVATLGNVLGSLVNWWLG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLERFQDRRWFPVSPKHMARARVHYQRYGHWSLLLSWLPVIGDPLTLIAGVMREPLGRF
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLIVTLAKGARYGVLAMLTLGWLG
HHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TAGYLGLFLAAFGAATLLPLQSEAVLVGLLVSDRYWLWGLLAVATLGNVLGSLVNWWLG
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLERFQDRRWFPVSPKHMARARVHYQRYGHWSLLLSWLPVIGDPLTLIAGVMREPLGRF
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLIVTLAKGARYGVLAMLTLGWLG
HHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]