| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeeA [H]
Identifier: 77458716
GI number: 77458716
Start: 2848299
End: 2849336
Strand: Reverse
Name: yeeA [H]
Synonym: Pfl01_2491
Alternate gene names: 77458716
Gene position: 2849336-2848299 (Counterclockwise)
Preceding gene: 77458717
Following gene: 77458714
Centisome position: 44.26
GC content: 63.58
Gene sequence:
>1038_bases TTGCGGCGGATCCTGCGGCCGTTGCTCGACCCGTATCGACGTTATCGCCATGCTCGAACGATTCACGCGGTGCGGGTCGC GTTGGGGTTGCTGGCGACAATCCTGCTGACCACCGGCATCAATCTGCCCCACGGCGAATGGGCGTCGGTGACCATGCTGG TGGTGATTGGCGGCCTGCAGCACCACGGCAACATCGGCAAGAAAGCCGCCGAGCGTGCCACCGGCACCTTGATCGGTGCC GGCGTCGGTTTGTTGATCGTGGCGCAACAGGCGTGGCTGGGCATGCCGTGGCTGACCTATTTTGCGATGGCAGTGGTCTG CGGATTTTTCTCGTATCACGCCATCGGCAAGGGCGGCTACACCGCCCTGCTCTCGGCCATTACCGTGTTCATTGTCGCCG GGCATGGCGACAACCCGATCACCGACGGGCTGTGGCGCGGGGTCGATATCCTGATCGGTATCGCCCTGGCCCTGGCCTTT TCCTTCGCTCTGCCGCTGTACGCGGTGTACTCGTGGCGCTACAACCTGGCCGACGCGCTGCGTGACTGCGCCACGGTGTA CGGGCGGATCATCGGCGGCCAACCGGTGACGGCCGACGAACACTTGAAGTTGATGAGCCGGCTGAACGCGGTGATGGTGC AACTGCGCTCGCTGATGCCGTCGGTGTCCAAGGAAGTCAAAGTCTCGATGACCGAACTGGACGCCATTCAGCGCAACCTG CGTATGTGCATCAGCACCCTGGAAATCCTCGGCAACATTCGCCCGGATGCCAACGACCCCGACGCCATGACGCACCTGCA AGCGGCGCTCAAGGCCGAGCACCGGCATATTCGCGTGCAATTGATCGGCATGGCCCGAGCGTTGAAAACTGGTGCGGCCC AGAGGCTGGGGCGCCCGGTGGAATTGCCGGACGCCAGCCTCGATACGCCTGTCTACAGCCCGCTGGATGGCTACCGTTTG TTGACCCGGCAACTGGCGGCCAACATCGGCGAAATGCGTCAGCGCCTGGCGAAGACCGCACCGCGCTGGAACATCTGA
Upstream 100 bases:
>100_bases ATCATTCGCGGACGGGATTCGAACTTCATCGCCACCGACTACATCTTCTGAGGAGGAATCAGCGCTGAGCACTTTCAGCC CCCACCGCTGGCCGCCGCTG
Downstream 100 bases:
>100_bases GGTTTACTGCGCGGCCAGGCGCCGCGCCTTCAATCCCCAACCCTGTTGCATGCCCGCAGCGGCCAATAGAATCGCCGCCA CGCCAATCCATTGCAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRRILRPLLDPYRRYRHARTIHAVRVALGLLATILLTTGINLPHGEWASVTMLVVIGGLQHHGNIGKKAAERATGTLIGA GVGLLIVAQQAWLGMPWLTYFAMAVVCGFFSYHAIGKGGYTALLSAITVFIVAGHGDNPITDGLWRGVDILIGIALALAF SFALPLYAVYSWRYNLADALRDCATVYGRIIGGQPVTADEHLKLMSRLNAVMVQLRSLMPSVSKEVKVSMTELDAIQRNL RMCISTLEILGNIRPDANDPDAMTHLQAALKAEHRHIRVQLIGMARALKTGAAQRLGRPVELPDASLDTPVYSPLDGYRL LTRQLAANIGEMRQRLAKTAPRWNI
Sequences:
>Translated_345_residues MRRILRPLLDPYRRYRHARTIHAVRVALGLLATILLTTGINLPHGEWASVTMLVVIGGLQHHGNIGKKAAERATGTLIGA GVGLLIVAQQAWLGMPWLTYFAMAVVCGFFSYHAIGKGGYTALLSAITVFIVAGHGDNPITDGLWRGVDILIGIALALAF SFALPLYAVYSWRYNLADALRDCATVYGRIIGGQPVTADEHLKLMSRLNAVMVQLRSLMPSVSKEVKVSMTELDAIQRNL RMCISTLEILGNIRPDANDPDAMTHLQAALKAEHRHIRVQLIGMARALKTGAAQRLGRPVELPDASLDTPVYSPLDGYRL LTRQLAANIGEMRQRLAKTAPRWNI >Mature_345_residues MRRILRPLLDPYRRYRHARTIHAVRVALGLLATILLTTGINLPHGEWASVTMLVVIGGLQHHGNIGKKAAERATGTLIGA GVGLLIVAQQAWLGMPWLTYFAMAVVCGFFSYHAIGKGGYTALLSAITVFIVAGHGDNPITDGLWRGVDILIGIALALAF SFALPLYAVYSWRYNLADALRDCATVYGRIIGGQPVTADEHLKLMSRLNAVMVQLRSLMPSVSKEVKVSMTELDAIQRNL RMCISTLEILGNIRPDANDPDAMTHLQAALKAEHRHIRVQLIGMARALKTGAAQRLGRPVELPDASLDTPVYSPLDGYRL LTRQLAANIGEMRQRLAKTAPRWNI
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=294, Percent_Identity=31.6326530612245, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 37792; Mature: 37792
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILRPLLDPYRRYRHARTIHAVRVALGLLATILLTTGINLPHGEWASVTMLVVIGGLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHH HHGNIGKKAAERATGTLIGAGVGLLIVAQQAWLGMPWLTYFAMAVVCGFFSYHAIGKGGY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH TALLSAITVFIVAGHGDNPITDGLWRGVDILIGIALALAFSFALPLYAVYSWRYNLADAL HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDCATVYGRIIGGQPVTADEHLKLMSRLNAVMVQLRSLMPSVSKEVKVSMTELDAIQRNL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMCISTLEILGNIRPDANDPDAMTHLQAALKAEHRHIRVQLIGMARALKTGAAQRLGRPV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELPDASLDTPVYSPLDGYRLLTRQLAANIGEMRQRLAKTAPRWNI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRILRPLLDPYRRYRHARTIHAVRVALGLLATILLTTGINLPHGEWASVTMLVVIGGLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHH HHGNIGKKAAERATGTLIGAGVGLLIVAQQAWLGMPWLTYFAMAVVCGFFSYHAIGKGGY HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHH TALLSAITVFIVAGHGDNPITDGLWRGVDILIGIALALAFSFALPLYAVYSWRYNLADAL HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDCATVYGRIIGGQPVTADEHLKLMSRLNAVMVQLRSLMPSVSKEVKVSMTELDAIQRNL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMCISTLEILGNIRPDANDPDAMTHLQAALKAEHRHIRVQLIGMARALKTGAAQRLGRPV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ELPDASLDTPVYSPLDGYRLLTRQLAANIGEMRQRLAKTAPRWNI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]