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The map label for this gene is asnC [C]

Identifier: 77458714

GI number: 77458714

Start: 2846825

End: 2847262

Strand: Reverse

Name: asnC [C]

Synonym: Pfl01_2489

Alternate gene names: 77458714

Gene position: 2847262-2846825 (Counterclockwise)

Preceding gene: 77458716

Following gene: 77458713

Centisome position: 44.22

GC content: 60.27

Gene sequence:

>438_bases
ATGACCGACGATATCGACCAGATCCTGATCGGAGCCCTGATGGAGGATTCGCGGCGCTCGCTCAAGGCCCTGGCGCAAAT
CAGCGGGTTGTCATCGCCGAGCGTGGCCGAGCGCCTGCGGCGGCTGGAGGAACGCGGTGTGCTCAAGGGTTACACCGTTG
AAATTGACCCGAAATGCTTCGGCTACCAGTTGCAGGCCATCGTCCGAGTGCGGCCATTGCCGGGGCAATTGCAGGAAGTC
GAGCGGCAGATTATGTCGATTCCCGAGTTTACCGAGTGCGACAAGGTCACCGGCGAGGACTGCTTTATCGCCCGCCTGCA
TGTGCGTTCGATGGAGCAACTTGACACCTTGCTCGACCGGCTGAATACGCTGGCGGAAACCAATACGGCGATCGTCAAGA
AGACCCCGGTGAAACGTCGATTGCCGCCGATGGCCTGA

Upstream 100 bases:

>100_bases
AGATCGGGGCCTCTCCAGCGGAAAAAGCAGGCTAAACTCGGTTTCTGCCTTTTTTATCAAGGGTAGTTTGTGCCATTCGC
CTAATGCGGGAGTTTCTTGT

Downstream 100 bases:

>100_bases
GCGGCGTAGATTGAGATTTTTCCGGCGAAGGATTGGCGGCATGAAAATTCAGGCAACGATGCTGGCTGTGTTGATGCTGG
CCGGGTGCGGGACGGTTCAG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTDDIDQILIGALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYTVEIDPKCFGYQLQAIVRVRPLPGQLQEV
ERQIMSIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDRLNTLAETNTAIVKKTPVKRRLPPMA

Sequences:

>Translated_145_residues
MTDDIDQILIGALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYTVEIDPKCFGYQLQAIVRVRPLPGQLQEV
ERQIMSIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDRLNTLAETNTAIVKKTPVKRRLPPMA
>Mature_144_residues
TDDIDQILIGALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYTVEIDPKCFGYQLQAIVRVRPLPGQLQEVE
RQIMSIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDRLNTLAETNTAIVKKTPVKRRLPPMA

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=152, Percent_Identity=25.6578947368421, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16393; Mature: 16262

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDIDQILIGALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYTVEIDPKCF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHH
GYQLQAIVRVRPLPGQLQEVERQIMSIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDR
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNTLAETNTAIVKKTPVKRRLPPMA
HHHHHHCCCHHHCCCCHHHCCCCCC
>Mature Secondary Structure 
TDDIDQILIGALMEDSRRSLKALAQISGLSSPSVAERLRRLEERGVLKGYTVEIDPKCF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHH
GYQLQAIVRVRPLPGQLQEVERQIMSIPEFTECDKVTGEDCFIARLHVRSMEQLDTLLDR
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNTLAETNTAIVKKTPVKRRLPPMA
HHHHHHCCCHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA