| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458643
Identifier: 77458643
GI number: 77458643
Start: 2774277
End: 2775020
Strand: Reverse
Name: 77458643
Synonym: Pfl01_2418
Alternate gene names: NA
Gene position: 2775020-2774277 (Counterclockwise)
Preceding gene: 77458645
Following gene: 77458642
Centisome position: 43.1
GC content: 50.81
Gene sequence:
>744_bases ATGCCCACAGCAGTTCTGGTTGACGGCGCCTACTTCATCAAGCGATTTCGAAGGATCGAGCCCCACAATGCATTCAATGC CGAACGGGCCGCTGATCTCGTACACCGATGGGCGACGGCACATCTGACAGCCAGGATGCCGCCCCGTCCAAATTGCCCGG TTTCAAGGCTGCAACAGCCCTCCAGAAAAGACCTTTACAGAATATTCTTTTACGACTGCCCTCCTCTGGACACCAAGCAA CACAACCCCATCACAAAAAAACTCGTCGATTTCTCCAAATCAAGAGAAGCCGTGTTTCGAAAAGAGCTGCACATTCGGTT GCGATCCAAACGAAAACTGGCATTGCGTCTGGGGCACCTTTCCAAAGATGTGAAATGGACAATCAAACCTTCGAGGATTG CCGAGCTACTCAAGGGAAAAATCCAGATAGCCGACCTCACCGAAACCGACGTCAGCATCGAGACCCGACAAAAAGGTGTT GATATGAGAATTGGTGTCGATGTCGCATCACTTTCTTTCAAACAACAGGTCGATCAAATCGTCCTGATTGCAGGTGATGC GGATTTTGTACCTGCGGCGAAGATGGCTCGGCGCGAAGGTGTTGATTTCATACTCGACCCGATGTGGCAGAGCATTCCAG ATAGCTTGATGGAGCATATAGATGGACTGCGTTCAACATGCCCCAAGCCCGCGCTTCGACCGGTATCAAACGATAACACT GCAGCTTTGAGTTCATCCGAGTGA
Upstream 100 bases:
>100_bases TCGCTCCCTAATCTGCCCACATCCCGCCCAAGGCAGTAAGCCGTCCTAATCATCCAGGATGTGCCAAACCCTTGGGCGTT TTTGTTTTCAGGAAGAACGC
Downstream 100 bases:
>100_bases TCCATCCTCTGGCGGGTGGCCAAGGGGATGAAGCTGTTTTGGGCAAGGGGCAGTGGCTACCTTTCCTGAAGCGGTTGCCA AATTCCAATCTACAAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPTAVLVDGAYFIKRFRRIEPHNAFNAERAADLVHRWATAHLTARMPPRPNCPVSRLQQPSRKDLYRIFFYDCPPLDTKQ HNPITKKLVDFSKSREAVFRKELHIRLRSKRKLALRLGHLSKDVKWTIKPSRIAELLKGKIQIADLTETDVSIETRQKGV DMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGVDFILDPMWQSIPDSLMEHIDGLRSTCPKPALRPVSNDNT AALSSSE
Sequences:
>Translated_247_residues MPTAVLVDGAYFIKRFRRIEPHNAFNAERAADLVHRWATAHLTARMPPRPNCPVSRLQQPSRKDLYRIFFYDCPPLDTKQ HNPITKKLVDFSKSREAVFRKELHIRLRSKRKLALRLGHLSKDVKWTIKPSRIAELLKGKIQIADLTETDVSIETRQKGV DMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGVDFILDPMWQSIPDSLMEHIDGLRSTCPKPALRPVSNDNT AALSSSE >Mature_246_residues PTAVLVDGAYFIKRFRRIEPHNAFNAERAADLVHRWATAHLTARMPPRPNCPVSRLQQPSRKDLYRIFFYDCPPLDTKQH NPITKKLVDFSKSREAVFRKELHIRLRSKRKLALRLGHLSKDVKWTIKPSRIAELLKGKIQIADLTETDVSIETRQKGVD MRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGVDFILDPMWQSIPDSLMEHIDGLRSTCPKPALRPVSNDNTA ALSSSE
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28073; Mature: 27942
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAVLVDGAYFIKRFRRIEPHNAFNAERAADLVHRWATAHLTARMPPRPNCPVSRLQQP CCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCC SRKDLYRIFFYDCPPLDTKQHNPITKKLVDFSKSREAVFRKELHIRLRSKRKLALRLGHL CHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKDVKWTIKPSRIAELLKGKIQIADLTETDVSIETRQKGVDMRIGVDVASLSFKQQVDQI CCCCEEEECHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCEE VLIAGDADFVPAAKMARREGVDFILDPMWQSIPDSLMEHIDGLRSTCPKPALRPVSNDNT EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AALSSSE CCCCCCC >Mature Secondary Structure PTAVLVDGAYFIKRFRRIEPHNAFNAERAADLVHRWATAHLTARMPPRPNCPVSRLQQP CCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCC SRKDLYRIFFYDCPPLDTKQHNPITKKLVDFSKSREAVFRKELHIRLRSKRKLALRLGHL CHHCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKDVKWTIKPSRIAELLKGKIQIADLTETDVSIETRQKGVDMRIGVDVASLSFKQQVDQI CCCCEEEECHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCEE VLIAGDADFVPAAKMARREGVDFILDPMWQSIPDSLMEHIDGLRSTCPKPALRPVSNDNT EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AALSSSE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA