| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catC [H]
Identifier: 77458553
GI number: 77458553
Start: 2682095
End: 2682385
Strand: Direct
Name: catC [H]
Synonym: Pfl01_2326
Alternate gene names: 77458553
Gene position: 2682095-2682385 (Clockwise)
Preceding gene: 255961275
Following gene: 77458554
Centisome position: 41.66
GC content: 61.17
Gene sequence:
>291_bases ATGCTGTTCCACGTAAAAATGACCGTGAAATTGCCCGCCGACATGGATCAGGCCGTTGCCACAAAACTCAAGGCCGACGA AAAGGAACTCGCCCAGCGCCTGCAACGCGAAGGCCAGTGGCGCCACCTCTGGCGCATCGCCGGGCACTACGCCAATTACA GCGTGTTCGACGTGCCCAGCGTCGAAGCGCTGCACGACACCCTGATGCTGCTGCCGCTGTTTCCCTACATGGACATCGAG ATCGACGGCCTCTGCCGCCATCCCTCGTCGATCCACACCGACGACCGCTGA
Upstream 100 bases:
>100_bases ACTTTCACCTGCACATTCCACGCACCCCGGGCCTGGGCCTGACACTGGATGAAGAGCGTCTGGCGCGTTTTCGCCGGCAC TGACCCCTAAGGAGAACGCC
Downstream 100 bases:
>100_bases GCCCGCCCCCACAACAACAAGATGAGGTGAACACCATGACCGTGAAGATTGCCCACACTGCCGAACTGCAAAAATTCTTC GAAGAAGCCGCCGGTTTTGC
Product: muconolactone delta-isomerase
Products: NA
Alternate protein names: MIase [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLFHVKMTVKLPADMDQAVATKLKADEKELAQRLQREGQWRHLWRIAGHYANYSVFDVPSVEALHDTLMLLPLFPYMDIE IDGLCRHPSSIHTDDR
Sequences:
>Translated_96_residues MLFHVKMTVKLPADMDQAVATKLKADEKELAQRLQREGQWRHLWRIAGHYANYSVFDVPSVEALHDTLMLLPLFPYMDIE IDGLCRHPSSIHTDDR >Mature_96_residues MLFHVKMTVKLPADMDQAVATKLKADEKELAQRLQREGQWRHLWRIAGHYANYSVFDVPSVEALHDTLMLLPLFPYMDIE IDGLCRHPSSIHTDDR
Specific function: Unknown
COG id: COG4829
COG function: function code Q; Muconolactone delta-isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the muconolactone Delta-isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR003464 - ProDom: PD006619 [H]
Pfam domain/function: PF02426 MIase [H]
EC number: =5.3.3.4 [H]
Molecular weight: Translated: 11173; Mature: 11173
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHVKMTVKLPADMDQAVATKLKADEKELAQRLQREGQWRHLWRIAGHYANYSVFDVPS CEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC VEALHDTLMLLPLFPYMDIEIDGLCRHPSSIHTDDR HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLFHVKMTVKLPADMDQAVATKLKADEKELAQRLQREGQWRHLWRIAGHYANYSVFDVPS CEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC VEALHDTLMLLPLFPYMDIEIDGLCRHPSSIHTDDR HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2449420; 7814330; 7391022; 901811; 2926818 [H]