| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catB [H]
Identifier: 255961275
GI number: 255961275
Start: 2680944
End: 2682077
Strand: Direct
Name: catB [H]
Synonym: Pfl01_2325
Alternate gene names: 255961275
Gene position: 2680944-2682077 (Clockwise)
Preceding gene: 77458551
Following gene: 77458553
Centisome position: 41.64
GC content: 63.93
Gene sequence:
>1134_bases ATGGACACTGAAATGAACCGGATCCTGATTGAAAACCTGTCGGCGATCATCGTCGACCTTCCGACTATCCGCCCGCACAA ACTGGCGATGCACACGATGCAGAACCAGACGCTGGTGATCCTGCGCCTGCGTTGCAGCGACGGTGTCGAAGGCATCGGCG AAGCCACCACCATCGGCGGCCTGGCCTACGGCTATGAAAGCCCGGAAAGCATCAAGGCCAACATCGATGCGCACCTGGCG CCGGCGCTGATCGGCATGGACGCGGACAACATCAACGTCGCCATGCAGAAGCTCGACAAGATTGCCAAGGGCAACACCTT CGCCAAGTCCGCCATCGAGAGCGCCTTGCTCGACGCCCAAGGCAAACGCCTCGGCCTGCCGGTGAGCGAACTGCTCGGCG GTCGGGTCCGCGACAGCCTCGAAGTGGCCTGGACCCTGGCCAGCGGCGACACCGCCCGCGACATCGCCGAGGCCGAACAA ATGCTGGAAGCGCGGCGTCACCGGATCTTCAAACTGAAGATCGGCGCCAACCCGCTGGAGCAGGATCTGAAACACGTGGT GGCGATCAAGAAAGCCCTGGGCGAGCGTGCCAGTGTGCGGGTCGACGTCAACCAGTATTGGGACGAGTCCCAGGCAATTC GCGGCTGCCGGGTGCTCGGCGACAACGGTATCGACCTGATCGAGCAGCCGATCTCGCGAGTCAATCGTTCCGGTCAGATT CGTCTGAACCAGCGCAGCCTGGCACCGATCATGGCCGATGAATCCATCGAAAGCGTCGAGGACGCGTTCAGCCTCGCCGC CGACGGCGCCGCCAGCGTCTTCGCCCTGAAGATCGCCAAGAACGGCGGCCCGCGCGCCGTGTTGCGCACTGCGCAAATCG CCGAAGCCGCCGGCATCGCGCTGTACGGCGGCACCATGCTCGAAGGCTCCGTCGGCACGCTGGCCTCGGCCCATGCGTTC CTCACGCTCAGGCAATTGACCTGGGACACCGAGCTGTTTGGTCCGCTGTTGCTCACCGAAGACATCGTCACCGAGCGCCC GCAGTACCGCGACTTTCACCTGCACATTCCACGCACCCCGGGCCTGGGCCTGACACTGGATGAAGAGCGTCTGGCGCGTT TTCGCCGGCACTGA
Upstream 100 bases:
>100_bases CAGGTCGGCGCGATCCTGTTTCTCGCCTCGGACGACGCCTCCTACATCACCGGTGTAACCCTGCCGGTCGGTGGCGGAGA CCTCGGTTGATCACGCTTGA
Downstream 100 bases:
>100_bases CCCCTAAGGAGAACGCCATGCTGTTCCACGTAAAAATGACCGTGAAATTGCCCGCCGACATGGATCAGGCCGTTGCCACA AAACTCAAGGCCGACGAAAA
Product: muconate cycloisomerase
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MDTEMNRILIENLSAIIVDLPTIRPHKLAMHTMQNQTLVILRLRCSDGVEGIGEATTIGGLAYGYESPESIKANIDAHLA PALIGMDADNINVAMQKLDKIAKGNTFAKSAIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEQ MLEARRHRIFKLKIGANPLEQDLKHVVAIKKALGERASVRVDVNQYWDESQAIRGCRVLGDNGIDLIEQPISRVNRSGQI RLNQRSLAPIMADESIESVEDAFSLAADGAASVFALKIAKNGGPRAVLRTAQIAEAAGIALYGGTMLEGSVGTLASAHAF LTLRQLTWDTELFGPLLLTEDIVTERPQYRDFHLHIPRTPGLGLTLDEERLARFRRH
Sequences:
>Translated_377_residues MDTEMNRILIENLSAIIVDLPTIRPHKLAMHTMQNQTLVILRLRCSDGVEGIGEATTIGGLAYGYESPESIKANIDAHLA PALIGMDADNINVAMQKLDKIAKGNTFAKSAIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEQ MLEARRHRIFKLKIGANPLEQDLKHVVAIKKALGERASVRVDVNQYWDESQAIRGCRVLGDNGIDLIEQPISRVNRSGQI RLNQRSLAPIMADESIESVEDAFSLAADGAASVFALKIAKNGGPRAVLRTAQIAEAAGIALYGGTMLEGSVGTLASAHAF LTLRQLTWDTELFGPLLLTEDIVTERPQYRDFHLHIPRTPGLGLTLDEERLARFRRH >Mature_377_residues MDTEMNRILIENLSAIIVDLPTIRPHKLAMHTMQNQTLVILRLRCSDGVEGIGEATTIGGLAYGYESPESIKANIDAHLA PALIGMDADNINVAMQKLDKIAKGNTFAKSAIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEQ MLEARRHRIFKLKIGANPLEQDLKHVVAIKKALGERASVRVDVNQYWDESQAIRGCRVLGDNGIDLIEQPISRVNRSGQI RLNQRSLAPIMADESIESVEDAFSLAADGAASVFALKIAKNGGPRAVLRTAQIAEAAGIALYGGTMLEGSVGTLASAHAF LTLRQLTWDTELFGPLLLTEDIVTERPQYRDFHLHIPRTPGLGLTLDEERLARFRRH
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=309, Percent_Identity=26.8608414239482, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 41116; Mature: 41116
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTEMNRILIENLSAIIVDLPTIRPHKLAMHTMQNQTLVILRLRCSDGVEGIGEATTIGG CCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCC LAYGYESPESIKANIDAHLAPALIGMDADNINVAMQKLDKIAKGNTFAKSAIESALLDAQ EEECCCCCCHHEECCCCHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEQMLEARRHRIFKLKIGANPLE CCCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEEECCCHHH QDLKHVVAIKKALGERASVRVDVNQYWDESQAIRGCRVLGDNGIDLIEQPISRVNRSGQI HHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEE RLNQRSLAPIMADESIESVEDAFSLAADGAASVFALKIAKNGGPRAVLRTAQIAEAAGIA EECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEE LYGGTMLEGSVGTLASAHAFLTLRQLTWDTELFGPLLLTEDIVTERPQYRDFHLHIPRTP EECCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCCEEEEECCCCC GLGLTLDEERLARFRRH CCCEEECHHHHHHHHCC >Mature Secondary Structure MDTEMNRILIENLSAIIVDLPTIRPHKLAMHTMQNQTLVILRLRCSDGVEGIGEATTIGG CCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCC LAYGYESPESIKANIDAHLAPALIGMDADNINVAMQKLDKIAKGNTFAKSAIESALLDAQ EEECCCCCCHHEECCCCHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC GKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEQMLEARRHRIFKLKIGANPLE CCCCCCCHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEEECCCHHH QDLKHVVAIKKALGERASVRVDVNQYWDESQAIRGCRVLGDNGIDLIEQPISRVNRSGQI HHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEE RLNQRSLAPIMADESIESVEDAFSLAADGAASVFALKIAKNGGPRAVLRTAQIAEAAGIA EECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEE LYGGTMLEGSVGTLASAHAFLTLRQLTWDTELFGPLLLTEDIVTERPQYRDFHLHIPRTP EECCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCCCCCCEEEEECCCCC GLGLTLDEERLARFRRH CCCEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3609743; 2449420; 2215699; 3612800; 7500361 [H]