| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458521
Identifier: 77458521
GI number: 77458521
Start: 2644902
End: 2645528
Strand: Reverse
Name: 77458521
Synonym: Pfl01_2294
Alternate gene names: NA
Gene position: 2645528-2644902 (Counterclockwise)
Preceding gene: 77458522
Following gene: 77458518
Centisome position: 41.09
GC content: 60.29
Gene sequence:
>627_bases ATGACTATGTATGGGGCAACGCAAAATGAAAGGGTCGTACACCGAGAGGCCTTTGGCGCGCCCTCCTTTTTGTCCTTGGT CCTTTGCTTGACGCTTGCAGCACCAGCCCAGGCTGACCCATGCCCTGCCGGCGAAAAACAAGTATGCCTCGACAGCTGCA TTTGCCTGCCGGATCCGGTGCGCCTGTCTGAAGACCTTTTCCGGATGGCAGCACCGGTCCTGGCGCAGGGCTTGACTCAG GCCCGCGCCGAAGCCGCCAGCACCGACATCAAACCGATTCCCCCGCACATCCGGGAGCAACTGCTGCGCTGGTATGAACC CAGTTTCCTCGATGCTGTGCACTACAAAATCACCAACGACGGCCAATACAACGCCGCCACGGCCATCCTGCAAAACCCGG ATGTCGGTGCAGTGACGCTGATCGACATCATTCTGTTCCGCGACGCTGAGACCGCGGAACACAACGTCGCGCTCTGGGCG CACGAACTGAAGCACGTGCAGCAGTTTCAGGAATGGGGCGTCGACGGGTTTGCGCAGCGGTATACGCAGGATTTCAATGC GGTCGAGGCTCCGGCCTACGCGATACAGGGCGAAGTCAGACGTTGGCTGCGAGCCGAAGCCCGGTGA
Upstream 100 bases:
>100_bases GTGAAACTGCCGGGCTTGATCTAGCCTTAAGTGAAACCACGCGGGAGAAAACCACCATGCCCCTCCCCCGAGCCTCTCGC GCTGACAACCCGTAGATGGA
Downstream 100 bases:
>100_bases TCGGACCTCCCCTGCGTCCATGCCGGGGATAGCCCCACCGTTCAAGCACCAGAAAAACCCTAGGCCTTGCCCGCCGAAAC CACCGCCCTCATCTGCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTMYGATQNERVVHREAFGAPSFLSLVLCLTLAAPAQADPCPAGEKQVCLDSCICLPDPVRLSEDLFRMAAPVLAQGLTQ ARAEAASTDIKPIPPHIREQLLRWYEPSFLDAVHYKITNDGQYNAATAILQNPDVGAVTLIDIILFRDAETAEHNVALWA HELKHVQQFQEWGVDGFAQRYTQDFNAVEAPAYAIQGEVRRWLRAEAR
Sequences:
>Translated_208_residues MTMYGATQNERVVHREAFGAPSFLSLVLCLTLAAPAQADPCPAGEKQVCLDSCICLPDPVRLSEDLFRMAAPVLAQGLTQ ARAEAASTDIKPIPPHIREQLLRWYEPSFLDAVHYKITNDGQYNAATAILQNPDVGAVTLIDIILFRDAETAEHNVALWA HELKHVQQFQEWGVDGFAQRYTQDFNAVEAPAYAIQGEVRRWLRAEAR >Mature_207_residues TMYGATQNERVVHREAFGAPSFLSLVLCLTLAAPAQADPCPAGEKQVCLDSCICLPDPVRLSEDLFRMAAPVLAQGLTQA RAEAASTDIKPIPPHIREQLLRWYEPSFLDAVHYKITNDGQYNAATAILQNPDVGAVTLIDIILFRDAETAEHNVALWAH ELKHVQQFQEWGVDGFAQRYTQDFNAVEAPAYAIQGEVRRWLRAEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23157; Mature: 23026
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMYGATQNERVVHREAFGAPSFLSLVLCLTLAAPAQADPCPAGEKQVCLDSCICLPDPV CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC RLSEDLFRMAAPVLAQGLTQARAEAASTDIKPIPPHIREQLLRWYEPSFLDAVHYKITND HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHEEECCC GQYNAATAILQNPDVGAVTLIDIILFRDAETAEHNVALWAHELKHVQQFQEWGVDGFAQR CCCCHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH YTQDFNAVEAPAYAIQGEVRRWLRAEAR HHHHCCHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TMYGATQNERVVHREAFGAPSFLSLVLCLTLAAPAQADPCPAGEKQVCLDSCICLPDPV CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC RLSEDLFRMAAPVLAQGLTQARAEAASTDIKPIPPHIREQLLRWYEPSFLDAVHYKITND HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHEEECCC GQYNAATAILQNPDVGAVTLIDIILFRDAETAEHNVALWAHELKHVQQFQEWGVDGFAQR CCCCHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH YTQDFNAVEAPAYAIQGEVRRWLRAEAR HHHHCCHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA