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The map label for this gene is cph2 [H]

Identifier: 77458522

GI number: 77458522

Start: 2645605

End: 2647116

Strand: Reverse

Name: cph2 [H]

Synonym: Pfl01_2295

Alternate gene names: 77458522

Gene position: 2647116-2645605 (Counterclockwise)

Preceding gene: 77458523

Following gene: 77458521

Centisome position: 41.11

GC content: 59.26

Gene sequence:

>1512_bases
GTGAAGCGAGATACACACCTGGTTGTGCTTTTGCTGTTGGTTATCGGTTGTTCCCTGGCCTCACTGACTGTCTGGAAGGT
GCTGGCCTCTCGAGAGCGAGCGCTGGAGGAAGTGGACGTTCACGGGTTGAACCTGACCCAGGCGCTTGTCACCTATTCCG
AAGGCATTGTCCGCCAAAGTTCGGCGCTTTTGCTCGGGCTCGTCGAACGCCTGGAAACCGAAGGGAGTGGCCCCGTTCAG
ATCCAGCGGATCAGTTCGCTGATCGACCGGCAGGAGCCGCTGATGCCACAGCTCAGCGGCATCACCATCTACGACAGTCA
GGGACGCTGGCTGATGTCCTCCAACCGGCCGATTCCGGCCGGGGCAAATAGCAGTGATCGGGCCTATTTCATTCATCACC
GCGATGATCCCTCCCCCGAGACCTTTATCGGTCCGCCCATTCAGAGCCGCACCAATCAGGAATGGGTCATCACCGTCAGT
CGACGCTTCAATGATGCTCGCGGTGAGTTTGCCGGTGTGGTCGCGGTGACCTTGGGCATCGAAAACTTTCTACGGCTGTT
TGGAAAGATCGATGTCGGCCAGGAGGGTGCCATCGGGTTGTCCTATACCGATGGTACGTTGCTGGTTCGCTACCCCTTCC
GCGAGCAGGACATGGGGCGCAACTTTTCAAAGTCACCGATCTACGCCAAGTACCTGGTGGATCACTCTGTCGGCACCGCC
TCGTTCACCTCCAGCCTGGACGGTGTGGAAAGGCTCTACGCCTTTCGCAAAAGTGACCGGCTGCCGCTGATCACGACCGT
CGCACTCGGGAAACGCGAAGCCCTCGCCGCGTGGCGAACGGAAGCGCTGCTATCGGCCGTGGTGGTGACGGGCCTGCTGG
CGCTTACCGGTCTCATCGGCTGGTTTTTGATACTGGATATCCGACGCAGAACCCAAGTAGAAGCGGAGTTGATGGGCACT
CAGCAGCAGTTGCTTTCGTCAAACAGGCAACTCGAGTTGTTGGCGATGAAGGACGCCTTGACCGGTCTGGCCAATCGACG
CTGTTTCGATGTGACGCTGGACCTGGAGGCGCGACGAGCGCAGCGCGACGGCACGTCCTTGGCACTGCTGATGATTGATA
TCGACTACTTCAAACTGTTCAACGATTCCTACGGGCATGTTGCCGGCGACGATTGCCTGCAACGCGTTGGCAACGTCGTG
GAGACGTGCGTGCGCCGTCCCTCGGATCTTGTGGCGCGGTATGGCGGTGAAGAGATGGGCGTCATCATGCCCAATACCGA
CAGCGAAGGTGCGCAGATCGTGGCGCAACTGATCCTCGACCGGTTGCAGCAAGCGAACATTTCCCACGAATCCAGCCCGT
TGGGACGAGTGAGTGTCAGCATCGGGATTGCCACTGCCGCCGGTTCCCGACTAACCCCTGTGCAAGGTTTGATCGAAGCC
GCCGATCAGGCGCTGTACAGTGCCAAGGCCTTGGGGCGAAACAGGTCGGTGAAACTGCCGGGCTTGATCTAG

Upstream 100 bases:

>100_bases
TGCTTGTATCCTTGCGCACGATGAGGACGAACGGCTGCCGTTATTGCCTTGATCCAATAGCCTCTGGAACGGAAAAACGG
ACTTTCCATAAGGTAGTGAC

Downstream 100 bases:

>100_bases
CCTTAAGTGAAACCACGCGGGAGAAAACCACCATGCCCCTCCCCCGAGCCTCTCGCGCTGACAACCCGTAGATGGAATGA
CTATGTATGGGGCAACGCAA

Product: diguanylate cyclase

Products: NA

Alternate protein names: Bacteriophytochrome cph2 [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALVTYSEGIVRQSSALLLGLVERLETEGSGPVQ
IQRISSLIDRQEPLMPQLSGITIYDSQGRWLMSSNRPIPAGANSSDRAYFIHHRDDPSPETFIGPPIQSRTNQEWVITVS
RRFNDARGEFAGVVAVTLGIENFLRLFGKIDVGQEGAIGLSYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTA
SFTSSLDGVERLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIGWFLILDIRRRTQVEAELMGT
QQQLLSSNRQLELLAMKDALTGLANRRCFDVTLDLEARRAQRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVV
ETCVRRPSDLVARYGGEEMGVIMPNTDSEGAQIVAQLILDRLQQANISHESSPLGRVSVSIGIATAAGSRLTPVQGLIEA
ADQALYSAKALGRNRSVKLPGLI

Sequences:

>Translated_503_residues
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALVTYSEGIVRQSSALLLGLVERLETEGSGPVQ
IQRISSLIDRQEPLMPQLSGITIYDSQGRWLMSSNRPIPAGANSSDRAYFIHHRDDPSPETFIGPPIQSRTNQEWVITVS
RRFNDARGEFAGVVAVTLGIENFLRLFGKIDVGQEGAIGLSYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTA
SFTSSLDGVERLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIGWFLILDIRRRTQVEAELMGT
QQQLLSSNRQLELLAMKDALTGLANRRCFDVTLDLEARRAQRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVV
ETCVRRPSDLVARYGGEEMGVIMPNTDSEGAQIVAQLILDRLQQANISHESSPLGRVSVSIGIATAAGSRLTPVQGLIEA
ADQALYSAKALGRNRSVKLPGLI
>Mature_503_residues
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALVTYSEGIVRQSSALLLGLVERLETEGSGPVQ
IQRISSLIDRQEPLMPQLSGITIYDSQGRWLMSSNRPIPAGANSSDRAYFIHHRDDPSPETFIGPPIQSRTNQEWVITVS
RRFNDARGEFAGVVAVTLGIENFLRLFGKIDVGQEGAIGLSYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTA
SFTSSLDGVERLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIGWFLILDIRRRTQVEAELMGT
QQQLLSSNRQLELLAMKDALTGLANRRCFDVTLDLEARRAQRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVV
ETCVRRPSDLVARYGGEEMGVIMPNTDSEGAQIVAQLILDRLQQANISHESSPLGRVSVSIGIATAAGSRLTPVQGLIEA
ADQALYSAKALGRNRSVKLPGLI

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 GGDEF domains [H]

Homologues:

Organism=Escherichia coli, GI1787262, Length=178, Percent_Identity=35.9550561797753, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87081881, Length=176, Percent_Identity=39.7727272727273, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1786584, Length=182, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=37.3417721518987, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788381, Length=167, Percent_Identity=34.7305389221557, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1787816, Length=203, Percent_Identity=32.0197044334975, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI87082007, Length=213, Percent_Identity=31.4553990610329, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787541, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788085, Length=201, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787802, Length=133, Percent_Identity=34.5864661654135, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081974, Length=161, Percent_Identity=27.9503105590062, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1788956, Length=176, Percent_Identity=29.5454545454545, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081977, Length=173, Percent_Identity=32.9479768786127, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]

EC number: NA

Molecular weight: Translated: 55205; Mature: 55205

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00024 HEMOPEXIN ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALVTYSEGIVRQS
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SALLLGLVERLETEGSGPVQIQRISSLIDRQEPLMPQLSGITIYDSQGRWLMSSNRPIPA
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCC
GANSSDRAYFIHHRDDPSPETFIGPPIQSRTNQEWVITVSRRFNDARGEFAGVVAVTLGI
CCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHH
ENFLRLFGKIDVGQEGAIGLSYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTA
HHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHCCCCCCCCCCEEEEEECCCCCCH
SFTSSLDGVERLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIG
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLILDIRRRTQVEAELMGTQQQLLSSNRQLELLAMKDALTGLANRRCFDVTLDLEARRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEEEEEECCHHHHH
QRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVVETCVRRPSDLVARYGGEEMG
CCCCCEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCE
VIMPNTDSEGAQIVAQLILDRLQQANISHESSPLGRVSVSIGIATAAGSRLTPVQGLIEA
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHH
ADQALYSAKALGRNRSVKLPGLI
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRDTHLVVLLLLVIGCSLASLTVWKVLASRERALEEVDVHGLNLTQALVTYSEGIVRQS
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SALLLGLVERLETEGSGPVQIQRISSLIDRQEPLMPQLSGITIYDSQGRWLMSSNRPIPA
HHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCC
GANSSDRAYFIHHRDDPSPETFIGPPIQSRTNQEWVITVSRRFNDARGEFAGVVAVTLGI
CCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHH
ENFLRLFGKIDVGQEGAIGLSYTDGTLLVRYPFREQDMGRNFSKSPIYAKYLVDHSVGTA
HHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHHCCCCCCCCCCEEEEEECCCCCCH
SFTSSLDGVERLYAFRKSDRLPLITTVALGKREALAAWRTEALLSAVVVTGLLALTGLIG
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLILDIRRRTQVEAELMGTQQQLLSSNRQLELLAMKDALTGLANRRCFDVTLDLEARRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEEEEEECCHHHHH
QRDGTSLALLMIDIDYFKLFNDSYGHVAGDDCLQRVGNVVETCVRRPSDLVARYGGEEMG
CCCCCEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCE
VIMPNTDSEGAQIVAQLILDRLQQANISHESSPLGRVSVSIGIATAAGSRLTPVQGLIEA
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHH
ADQALYSAKALGRNRSVKLPGLI
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 10978170; 11063585 [H]