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The map label for this gene is ceaC [H]

Identifier: 77458509

GI number: 77458509

Start: 2633206

End: 2634441

Strand: Direct

Name: ceaC [H]

Synonym: Pfl01_2282

Alternate gene names: 77458509

Gene position: 2633206-2634441 (Clockwise)

Preceding gene: 77458508

Following gene: 77458510

Centisome position: 40.9

GC content: 58.01

Gene sequence:

>1236_bases
ATGCATGAACGAAAGGACAAATCAGTGGCTGTTCAAAAGGACATTCCCCGGGTTCCCAACCCACCGGCGGGCGACGGGCA
TCACGTCACCTACCGCTACATGACGGCCACCGAACTGGCCGATCAGCAAGACCGACAAGACAAGTACGACGCCATGCTGG
CGAGGCAGGACGCCTTCGAGCGTAGCCGTGAGGTGGCGGCGAACAAGCCTGATGCGGTGCGTGCCGGCTGCGTGTTTGCC
AAGTCCTGCAGGTTGCCGGACGCGATCATCGATTACTCAAATCCGTCGGGGATGGTGCCGACAGACAGCCTGAAGGACTA
CGGCGAGCTGATTTTGCTCGGTGGCCGTGAGGCCGATGACAGCGGTGGGGTTGAGCTCAAGAAAATCAGCGGCACGGCCA
TTCCTGCGGGGCTGGGCACTTTCGCCCTTGCCGGTGAGGGGTTCAAGGCATTGCCCGCGATGGCCTCTGCTGCCGTCATC
AGCCCGTTGCTCGGGCTGGTGGCGATGTTCATGCCCTCGAACCTGGGCGATAGCGCGCTTTACACCGAAGACCAGTTGCT
CGCCCTCAAACAGGCCCGAACCCGCGTGCGCTTGCGCGTTGAACAGCAGGCCGATGGCAGCCTCAAGGGGTACGGCTTCT
ATACCGGCAAGAATCGCGATTGGGAGATGGTTGATGTCGTGCAGTTCACGGCACGCGATAGCCGGTTTGTTGCAGACCTC
GGTGACGGTGTTGAGCTGATCTGGACGCCTGCCGTGGATGGTTCCGACATCCTCGGGATTCCTGCGCTGGAGGCTGCTCC
GCAGGCGCCGCATATCTGGGTGTATCCGCCGACGAAAGCGGCGGACGGGATTCTGGTTAATCCGGTTTATCCGCCGGAGT
ATCGGGATTTCATTTTGGTGTTTCCGGCAGAGTCGGGGGTTAAGCCGGTATACATTGTTGTCAGCATCCACGCGGGGGAC
CACGAGTACCATCCGGCTCCTGACGTGCTCCCAGCCTTTCCTGATGCAAGAATCGTAGGCCGTAAAACGTCTGTACAAGG
TGGTGGGGCGAAGCGCAAAAGATGGAAAACTGCTAAGGGCTTGATTCTTGAGTGGGACTCTATGCACGGTACGGTCGAAA
AATATGATGCGAGAGGTAAACACCTCGGAGAGTTCGATCCGAACACAGGCGAGCCGACATCTACAAAAAAGAATAAAAAA
TCTAAAAAAGGCAAGAAAAGGAGCATTGAACCTTGA

Upstream 100 bases:

>100_bases
CCGTTCACGTCGAACAATCCCCACGTCTTTAGAGATACGTCCTACAGCCACGATTTTCCTGCTTCGTTAACGTCGTGCGG
CCTCTTGCGAGGGGTTGCCG

Downstream 100 bases:

>100_bases
GATTTTTAGTAGAAGCTTTTGACATCGAGACAGACTTCCAGGCTTTCGTTATCGAATTGCCACAGGGATGTGATGAGCAA
ATCAAAGCCATCATGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Colicin-E3 A chain; Ribonuclease [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MHERKDKSVAVQKDIPRVPNPPAGDGHHVTYRYMTATELADQQDRQDKYDAMLARQDAFERSREVAANKPDAVRAGCVFA
KSCRLPDAIIDYSNPSGMVPTDSLKDYGELILLGGREADDSGGVELKKISGTAIPAGLGTFALAGEGFKALPAMASAAVI
SPLLGLVAMFMPSNLGDSALYTEDQLLALKQARTRVRLRVEQQADGSLKGYGFYTGKNRDWEMVDVVQFTARDSRFVADL
GDGVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILVFPAESGVKPVYIVVSIHAGD
HEYHPAPDVLPAFPDARIVGRKTSVQGGGAKRKRWKTAKGLILEWDSMHGTVEKYDARGKHLGEFDPNTGEPTSTKKNKK
SKKGKKRSIEP

Sequences:

>Translated_411_residues
MHERKDKSVAVQKDIPRVPNPPAGDGHHVTYRYMTATELADQQDRQDKYDAMLARQDAFERSREVAANKPDAVRAGCVFA
KSCRLPDAIIDYSNPSGMVPTDSLKDYGELILLGGREADDSGGVELKKISGTAIPAGLGTFALAGEGFKALPAMASAAVI
SPLLGLVAMFMPSNLGDSALYTEDQLLALKQARTRVRLRVEQQADGSLKGYGFYTGKNRDWEMVDVVQFTARDSRFVADL
GDGVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILVFPAESGVKPVYIVVSIHAGD
HEYHPAPDVLPAFPDARIVGRKTSVQGGGAKRKRWKTAKGLILEWDSMHGTVEKYDARGKHLGEFDPNTGEPTSTKKNKK
SKKGKKRSIEP
>Mature_411_residues
MHERKDKSVAVQKDIPRVPNPPAGDGHHVTYRYMTATELADQQDRQDKYDAMLARQDAFERSREVAANKPDAVRAGCVFA
KSCRLPDAIIDYSNPSGMVPTDSLKDYGELILLGGREADDSGGVELKKISGTAIPAGLGTFALAGEGFKALPAMASAAVI
SPLLGLVAMFMPSNLGDSALYTEDQLLALKQARTRVRLRVEQQADGSLKGYGFYTGKNRDWEMVDVVQFTARDSRFVADL
GDGVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILVFPAESGVKPVYIVVSIHAGD
HEYHPAPDVLPAFPDARIVGRKTSVQGGGAKRKRWKTAKGLILEWDSMHGTVEKYDARGKHLGEFDPNTGEPTSTKKNKK
SKKGKKRSIEP

Specific function: Colicins are polypeptide toxins produced by and active against E.coli and closely related bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cloacin colicin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003058
- InterPro:   IPR009105
- InterPro:   IPR016128 [H]

Pfam domain/function: PF03515 Cloacin; PF09000 Cytotoxic [H]

EC number: NA

Molecular weight: Translated: 44751; Mature: 44751

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHERKDKSVAVQKDIPRVPNPPAGDGHHVTYRYMTATELADQQDRQDKYDAMLARQDAFE
CCCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RSREVAANKPDAVRAGCVFAKSCRLPDAIIDYSNPSGMVPTDSLKDYGELILLGGREADD
HHHHHHCCCCCHHHHHHEEHHCCCCCHHEEECCCCCCCCCCHHHHCCCCEEEECCCCCCC
SGGVELKKISGTAIPAGLGTFALAGEGFKALPAMASAAVISPLLGLVAMFMPSNLGDSAL
CCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YTEDQLLALKQARTRVRLRVEQQADGSLKGYGFYTGKNRDWEMVDVVQFTARDSRFVADL
ECHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEHHCCCCEEEEEC
GDGVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILV
CCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEE
FPAESGVKPVYIVVSIHAGDHEYHPAPDVLPAFPDARIVGRKTSVQGGGAKRKRWKTAKG
EECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCC
LILEWDSMHGTVEKYDARGKHLGEFDPNTGEPTSTKKNKKSKKGKKRSIEP
EEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHERKDKSVAVQKDIPRVPNPPAGDGHHVTYRYMTATELADQQDRQDKYDAMLARQDAFE
CCCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RSREVAANKPDAVRAGCVFAKSCRLPDAIIDYSNPSGMVPTDSLKDYGELILLGGREADD
HHHHHHCCCCCHHHHHHEEHHCCCCCHHEEECCCCCCCCCCHHHHCCCCEEEECCCCCCC
SGGVELKKISGTAIPAGLGTFALAGEGFKALPAMASAAVISPLLGLVAMFMPSNLGDSAL
CCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YTEDQLLALKQARTRVRLRVEQQADGSLKGYGFYTGKNRDWEMVDVVQFTARDSRFVADL
ECHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEHHCCCCEEEEEC
GDGVELIWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADGILVNPVYPPEYRDFILV
CCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEE
FPAESGVKPVYIVVSIHAGDHEYHPAPDVLPAFPDARIVGRKTSVQGGGAKRKRWKTAKG
EECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCC
LILEWDSMHGTVEKYDARGKHLGEFDPNTGEPTSTKKNKKSKKGKKRSIEP
EEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3889348; 6095211; 6344012; 6295812; 730747 [H]