| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458483
Identifier: 77458483
GI number: 77458483
Start: 2589655
End: 2590164
Strand: Direct
Name: 77458483
Synonym: Pfl01_2256
Alternate gene names: NA
Gene position: 2589655-2590164 (Clockwise)
Preceding gene: 77458482
Following gene: 77458484
Centisome position: 40.22
GC content: 63.92
Gene sequence:
>510_bases ATGAAATTCAACCATTGGGCCGTGTTGCCAGCGGCCATCGCGCTCGCGGCACTGGCGGCCACCGGTGTCGCGTTGGGCGA GGCCGATGACGGCGATGCCTCGCCGATCTACGGCGTGAAACTGCCGAAAAACTATCGCCAGTGGGCGCTGATTGCCCCGG CCCAGGAAGCCGCGCCGCTGGATGAACTGCGCGCGGTGCTGGGCAATGACCGGGCGATCAAGGCTTACCAGAGCAAGACG CTGCCGTTTCCCGACGGCACGGTGCTGGTGAAGCTGGCGTGGAAACACGTGCAGTCGCCGGAATTCGAGCCGGCCTCGAT TCCGGGGGCGGCCACCACCGTTCAGGTGATGGTCAAGGACTCGCGCAAATACGCCTCGACCGGTGGCTGGGGATTCGGCC GGTTCATCAACGGCAAACCTGCCGATGAAGCCCAGCACCAGACCTGCTTTGCCTGCCATCAGGCGCGGGTGCAGAACCAC GATTTTGTCTTCACTCGATACGCTCCCTGA
Upstream 100 bases:
>100_bases CGGCATCGGCCACAACCTGCCGCAGGAAGCGCCGCAGGCGTTCGCTCAGGCGGTGATCGATGCCGATCATCTCTGATTGC CGGCCGAAGGGGATCCGACC
Downstream 100 bases:
>100_bases ATCCGTCATACGAGGAACATCCAGATGAAAAAAACACTGATTGCACTGAGCATCGCTGCGGGCCTGTGCCTGGGCGCCAA TGCCTTCGCCCAAACCGCCA
Product: putative cytochrome P460
Products: NA
Alternate protein names: Cytochrome C
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKFNHWAVLPAAIALAALAATGVALGEADDGDASPIYGVKLPKNYRQWALIAPAQEAAPLDELRAVLGNDRAIKAYQSKT LPFPDGTVLVKLAWKHVQSPEFEPASIPGAATTVQVMVKDSRKYASTGGWGFGRFINGKPADEAQHQTCFACHQARVQNH DFVFTRYAP
Sequences:
>Translated_169_residues MKFNHWAVLPAAIALAALAATGVALGEADDGDASPIYGVKLPKNYRQWALIAPAQEAAPLDELRAVLGNDRAIKAYQSKT LPFPDGTVLVKLAWKHVQSPEFEPASIPGAATTVQVMVKDSRKYASTGGWGFGRFINGKPADEAQHQTCFACHQARVQNH DFVFTRYAP >Mature_169_residues MKFNHWAVLPAAIALAALAATGVALGEADDGDASPIYGVKLPKNYRQWALIAPAQEAAPLDELRAVLGNDRAIKAYQSKT LPFPDGTVLVKLAWKHVQSPEFEPASIPGAATTVQVMVKDSRKYASTGGWGFGRFINGKPADEAQHQTCFACHQARVQNH DFVFTRYAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18289; Mature: 18289
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNHWAVLPAAIALAALAATGVALGEADDGDASPIYGVKLPKNYRQWALIAPAQEAAPL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHCCCH DELRAVLGNDRAIKAYQSKTLPFPDGTVLVKLAWKHVQSPEFEPASIPGAATTVQVMVKD HHHHHHHCCCCEEEHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEC SRKYASTGGWGFGRFINGKPADEAQHQTCFACHQARVQNHDFVFTRYAP CCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MKFNHWAVLPAAIALAALAATGVALGEADDGDASPIYGVKLPKNYRQWALIAPAQEAAPL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHCCCH DELRAVLGNDRAIKAYQSKTLPFPDGTVLVKLAWKHVQSPEFEPASIPGAATTVQVMVKD HHHHHHHCCCCEEEHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEEC SRKYASTGGWGFGRFINGKPADEAQHQTCFACHQARVQNHDFVFTRYAP CCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA