| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458482
Identifier: 77458482
GI number: 77458482
Start: 2588587
End: 2589630
Strand: Direct
Name: 77458482
Synonym: Pfl01_2255
Alternate gene names: NA
Gene position: 2588587-2589630 (Clockwise)
Preceding gene: 77458481
Following gene: 77458483
Centisome position: 40.21
GC content: 64.37
Gene sequence:
>1044_bases ATGACTGACTCTAACGCTGTAACCCCATCCCGGCGCGTGCTCGCCGGTTCGATCCTGGCGCTTGCGCTGGGCATCGCCTC GGCTTACGCCAGCGCCGCCGACGTGCCCGCTGGCAAGATCGACGCCATTACCGCCGGCACCCATGTTTCGTTCGGCGCGC TGAAACACGTCAAGGCCGGACTGCTGGACGTGTCCTACGCCGAAGTGGGTCCGGCCGACGGCCCGGTGGTCATCCTGCTG CACGGCTGGCCTTACGATATTCACAGCTACACCGATGTGGCGCCGGCGCTGGCGCAGAAGGGCTATCGGGTGCTGATTCC TTACGCGCGCGGCTATGGCGACACGCGTTTCCTGTCTGCCAAAACCGTGCGCAACGGTCAGCCGGCGGCGTTGGCGAAGG ATCTGATCGACTTCATGGACGCCCTGAAAATCAAGCAGGCAGTACTCGGTGGCTACGACTGGGGCGCGCGCACCGCCGAC ATCGTCGCGGCGCTCTGGCCCGAGCGGGTGAAAGCGCTGGTGGCGGTGAGTGGTTACCTGATCGGCAGTCAGGACGCCGG CAAGGCGCCGCTGCCGCCGGCGGCGGAGTTGCAGTGGTGGTATCAGTTCTACTTTGCGACCGAACGTGGTCGTCTGGGCT ACGAAAAGAACACCCACGACTTCGCCAAACTGATCTGGCAGCTGGCCTCGCCGAAGTGGAACTTCGACGACGCGACCTAC GACCGCAGCGCCGCCGCGTTGCAGAACCCGGATCACGTCGCCGTGTCGATCTTCAACTACCGCTGGCGCCTGGGACTGAT CAAAGGGGAAGCGCAATACGATCCGCTGGAGAAAAAACTGGCGACGTTCCCTTCCATCGGCGTACCGACCATCACTCTGG AAGGCGACGCCAATGGCGCGCCGCACCCACCGGCCGAGGCCTACGCCAAACGCTTCACCGGCAAGTACGAATATCGGCTG ATCAGCGGCGGCATCGGCCACAACCTGCCGCAGGAAGCGCCGCAGGCGTTCGCTCAGGCGGTGATCGATGCCGATCATCT CTGA
Upstream 100 bases:
>100_bases AGGCAGCCCGCTAGACCTGCAATCCGCAAGCCCTTTAACCCACAGCCCTTTAACCCCAAGCCCGGAACCGCCGCCCGGCG GTTCACGAGGGAGACTCGGC
Downstream 100 bases:
>100_bases TTGCCGGCCGAAGGGGATCCGACCATGAAATTCAACCATTGGGCCGTGTTGCCAGCGGCCATCGCGCTCGCGGCACTGGC GGCCACCGGTGTCGCGTTGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase; Epoxide Hydrolase Protein; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Epoxide Hydrolase EphB; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold; Haloalkane Dehalogenase; Dehalogenase/Hydrolase; S33 Family Peptidase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Fold Hydrolase
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTDSNAVTPSRRVLAGSILALALGIASAYASAADVPAGKIDAITAGTHVSFGALKHVKAGLLDVSYAEVGPADGPVVILL HGWPYDIHSYTDVAPALAQKGYRVLIPYARGYGDTRFLSAKTVRNGQPAALAKDLIDFMDALKIKQAVLGGYDWGARTAD IVAALWPERVKALVAVSGYLIGSQDAGKAPLPPAAELQWWYQFYFATERGRLGYEKNTHDFAKLIWQLASPKWNFDDATY DRSAAALQNPDHVAVSIFNYRWRLGLIKGEAQYDPLEKKLATFPSIGVPTITLEGDANGAPHPPAEAYAKRFTGKYEYRL ISGGIGHNLPQEAPQAFAQAVIDADHL
Sequences:
>Translated_347_residues MTDSNAVTPSRRVLAGSILALALGIASAYASAADVPAGKIDAITAGTHVSFGALKHVKAGLLDVSYAEVGPADGPVVILL HGWPYDIHSYTDVAPALAQKGYRVLIPYARGYGDTRFLSAKTVRNGQPAALAKDLIDFMDALKIKQAVLGGYDWGARTAD IVAALWPERVKALVAVSGYLIGSQDAGKAPLPPAAELQWWYQFYFATERGRLGYEKNTHDFAKLIWQLASPKWNFDDATY DRSAAALQNPDHVAVSIFNYRWRLGLIKGEAQYDPLEKKLATFPSIGVPTITLEGDANGAPHPPAEAYAKRFTGKYEYRL ISGGIGHNLPQEAPQAFAQAVIDADHL >Mature_346_residues TDSNAVTPSRRVLAGSILALALGIASAYASAADVPAGKIDAITAGTHVSFGALKHVKAGLLDVSYAEVGPADGPVVILLH GWPYDIHSYTDVAPALAQKGYRVLIPYARGYGDTRFLSAKTVRNGQPAALAKDLIDFMDALKIKQAVLGGYDWGARTADI VAALWPERVKALVAVSGYLIGSQDAGKAPLPPAAELQWWYQFYFATERGRLGYEKNTHDFAKLIWQLASPKWNFDDATYD RSAAALQNPDHVAVSIFNYRWRLGLIKGEAQYDPLEKKLATFPSIGVPTITLEGDANGAPHPPAEAYAKRFTGKYEYRLI SGGIGHNLPQEAPQAFAQAVIDADHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=143, Percent_Identity=34.2657342657343, Blast_Score=79, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37433; Mature: 37302
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSNAVTPSRRVLAGSILALALGIASAYASAADVPAGKIDAITAGTHVSFGALKHVKAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH LLDVSYAEVGPADGPVVILLHGWPYDIHSYTDVAPALAQKGYRVLIPYARGYGDTRFLSA HEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEH KTVRNGQPAALAKDLIDFMDALKIKQAVLGGYDWGARTADIVAALWPERVKALVAVSGYL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEE IGSQDAGKAPLPPAAELQWWYQFYFATERGRLGYEKNTHDFAKLIWQLASPKWNFDDATY EECCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC DRSAAALQNPDHVAVSIFNYRWRLGLIKGEAQYDPLEKKLATFPSIGVPTITLEGDANGA CCCHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC PHPPAEAYAKRFTGKYEYRLISGGIGHNLPQEAPQAFAQAVIDADHL CCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDSNAVTPSRRVLAGSILALALGIASAYASAADVPAGKIDAITAGTHVSFGALKHVKAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH LLDVSYAEVGPADGPVVILLHGWPYDIHSYTDVAPALAQKGYRVLIPYARGYGDTRFLSA HEEEEHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEH KTVRNGQPAALAKDLIDFMDALKIKQAVLGGYDWGARTADIVAALWPERVKALVAVSGYL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEE IGSQDAGKAPLPPAAELQWWYQFYFATERGRLGYEKNTHDFAKLIWQLASPKWNFDDATY EECCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC DRSAAALQNPDHVAVSIFNYRWRLGLIKGEAQYDPLEKKLATFPSIGVPTITLEGDANGA CCCHHHHCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC PHPPAEAYAKRFTGKYEYRLISGGIGHNLPQEAPQAFAQAVIDADHL CCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA