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The map label for this gene is nodV [H]

Identifier: 77458478

GI number: 77458478

Start: 2582468

End: 2584441

Strand: Reverse

Name: nodV [H]

Synonym: Pfl01_2251

Alternate gene names: 77458478

Gene position: 2584441-2582468 (Counterclockwise)

Preceding gene: 77458480

Following gene: 77458477

Centisome position: 40.14

GC content: 63.42

Gene sequence:

>1974_bases
ATGAGAATCGATATGACGAACGAGCAGGAGCGCGTCATCGAGGACGGCCCAGACCGCGGCAGTGACGCGACCATGCCAGC
GCCGGGGGTCGACTCGATCATCGACAGCATCCCGGCCATGGTCGCCTTCATGACGCCGTCCGGTGAACTGGAACAGGTCA
ACCGGCAAATCATGGATTACATCGGCGCCCCGCTCCATGAACTGAAAAAATGGCAGGCCGGCGAAACCGTGCACCCGGAC
GACCTGCCCTCGGTCATCGCCGCGTGGATGCATTCAGTCAGCACCGGCACTCCCTACGAAATCGAACATCGCATCCGTCG
CGCCGACGGTGTCTATCGCTGGTTCCATGTGCGCGGCCTGCCGATCAGAAACAGCGAAGGCACCATCACACGCTGGTGCG
TGCTGCAGGTCGATATCGATGAGCGCCGGCGGGACAAGGCCTTGATCGCCAGTGCCCTGGCCGAAGTCAGCGCGTCGGAA
GAACGTCTGCGCGGGATCATCGACGCCGTTCCCGGTTTTGTCTGGAGCGCCTCGCCGGAAGGCAACGTCGGCTTCGTCAA
TCAGCGCTGGTGCGACTACACCGGCATGTCCGTCGAACAAGCTTGCGGTGACGGCTGGACGGCGTCCATCCACCCGGACG
ACGCCCCCGGACTGGGCGGCTATTGGCAAGCGCTTCTGCAATCGGGCAGCGCCGGTGAGTACGAGGCTCGACTGAAACGT
TTCGATGGCATCTACCGCTGGTTTCTGATCCGTGCCGTACCCCAGCGCGATGACACGGGGCGCGTCGTGCGCTGGTATGG
CGAGAACACGGATATCGAGGACCGCAAACGGGCGGAAGTCTTTCTGGCCAAGGCCCAACGCCTGAGCGCCACCGGTACGT
TTTCCTGGCGGGTGAGCACCGACGAGATCACCTGGTCGGACGAGGTCTACCGCATCCTTGAACTGGACCCGGACACCCCG
CCCGGCTTCGAGGCGATCTATCGCCGCGTGCACCCGGACGACATCTCCAGCCATCGGGAGATGATCAAGCGCCAGCGCCG
CAAGGGGCGTGATTTCGAACACGAACACCGGCTGCTGATGCCCGACGGCACGGTGAAATACGTGCGGCTGGTGGCGCACT
CGATCGCCCATGCGCCGGACGGTTTCGAATACATCGCCGCCCTGCAGGACATTACCCAGCGCCGGCTCGCCGAAGAGGTC
TTGAGCAAGGCGCGCTCGGAACTGACGCACCTGGCCAGGGTCGCCAGCCTCGGCGCGGTCACGGCGTCGATTGCCCACGA
GGTCAATCAACCGCTGGCCGGCATCATCACCAACGCCAGCACCTGCCTGCGCATGCTTGGTGCGGACCCGCCGAATGTCG
AAGGCGCCAGGGAAACCGCACGCCGGACCATTCGCGACGGCAATCGCGCGGCAGACGTGATCAATCGACTGCGGGCGCTG
TTCTCGAAGAAAAGCATCACGATCGAGGACGTCAATCTGAATGACGCGGCACGGGAAGTCATCGCCATGCTGCTGGGCGA
ACTGCAACGCAACGGCGTGGTGCTGCATCCGCAATTTGCCGAAGCCCTGCCGCTGGTCAGAGGCGACCGGGTCCAGCTGC
AGCAGGTGATCCTCAACCTGATCATGAATGCCGCCGAGGCCATGAGCGCGATCCACGGCCGGCCCCGGCAATTGATCGTC
AGCACCGATCTGGGCTCGGACGAGAACGTTTACCTGGCGGTGAAGGACAGCGGCAACGGCGTCGATCCGCAGGACATCGA
GCGCATTTTCAATGCCTTCTACACCACCAAAAGCTCGGGCATGGGCGTCGGTCTGTCCATCAGTCGCTCAATCATCGAGC
GCCACGACGGGAAGCTGTGGGCCAGCGCCAACGACGGCCCGGGAGCGACGTTTACCTTTGCCATCCCGCATTCGACAGAC
TTGCCGCAAACCGATAACCGCGACCTCGCCGATCGCACCGTGGAGAATGATTGA

Upstream 100 bases:

>100_bases
CAGTGCGCGATGGCAGCAGATATTCGCTACGGGCGACACCAAAGTATGATGGGCGAGTGCCATCCGAAGGCGCATCTTTG
TTCAACGGTGACTGCACACA

Downstream 100 bases:

>100_bases
TGGGTACGCCTTTGCTCGTATCGGTGGTCGATGACGACGAATCGGTTCGTGAATCACTGCCTGACCTGATCAAGGAATTC
GGCTTTGCCGTCCAGGCATT

Product: PAS/PAC sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGELEQVNRQIMDYIGAPLHELKKWQAGETVHPD
DLPSVIAAWMHSVSTGTPYEIEHRIRRADGVYRWFHVRGLPIRNSEGTITRWCVLQVDIDERRRDKALIASALAEVSASE
ERLRGIIDAVPGFVWSASPEGNVGFVNQRWCDYTGMSVEQACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKR
FDGIYRWFLIRAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVSTDEITWSDEVYRILELDPDTP
PGFEAIYRRVHPDDISSHREMIKRQRRKGRDFEHEHRLLMPDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEV
LSKARSELTHLARVASLGAVTASIAHEVNQPLAGIITNASTCLRMLGADPPNVEGARETARRTIRDGNRAADVINRLRAL
FSKKSITIEDVNLNDAAREVIAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNLIMNAAEAMSAIHGRPRQLIV
STDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSGMGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTD
LPQTDNRDLADRTVEND

Sequences:

>Translated_657_residues
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGELEQVNRQIMDYIGAPLHELKKWQAGETVHPD
DLPSVIAAWMHSVSTGTPYEIEHRIRRADGVYRWFHVRGLPIRNSEGTITRWCVLQVDIDERRRDKALIASALAEVSASE
ERLRGIIDAVPGFVWSASPEGNVGFVNQRWCDYTGMSVEQACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKR
FDGIYRWFLIRAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVSTDEITWSDEVYRILELDPDTP
PGFEAIYRRVHPDDISSHREMIKRQRRKGRDFEHEHRLLMPDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEV
LSKARSELTHLARVASLGAVTASIAHEVNQPLAGIITNASTCLRMLGADPPNVEGARETARRTIRDGNRAADVINRLRAL
FSKKSITIEDVNLNDAAREVIAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNLIMNAAEAMSAIHGRPRQLIV
STDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSGMGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTD
LPQTDNRDLADRTVEND
>Mature_657_residues
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGELEQVNRQIMDYIGAPLHELKKWQAGETVHPD
DLPSVIAAWMHSVSTGTPYEIEHRIRRADGVYRWFHVRGLPIRNSEGTITRWCVLQVDIDERRRDKALIASALAEVSASE
ERLRGIIDAVPGFVWSASPEGNVGFVNQRWCDYTGMSVEQACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKR
FDGIYRWFLIRAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVSTDEITWSDEVYRILELDPDTP
PGFEAIYRRVHPDDISSHREMIKRQRRKGRDFEHEHRLLMPDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEV
LSKARSELTHLARVASLGAVTASIAHEVNQPLAGIITNASTCLRMLGADPPNVEGARETARRTIRDGNRAADVINRLRAL
FSKKSITIEDVNLNDAAREVIAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNLIMNAAEAMSAIHGRPRQLIV
STDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSGMGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTD
LPQTDNRDLADRTVEND

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=269, Percent_Identity=30.4832713754647, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=27.3913043478261, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1790300, Length=307, Percent_Identity=25.7328990228013, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI48994928, Length=262, Percent_Identity=24.4274809160305, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=25.5813953488372, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 73236; Mature: 73236

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGELEQVNRQIMDY
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
IGAPLHELKKWQAGETVHPDDLPSVIAAWMHSVSTGTPYEIEHRIRRADGVYRWFHVRGL
HCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECC
PIRNSEGTITRWCVLQVDIDERRRDKALIASALAEVSASEERLRGIIDAVPGFVWSASPE
EEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEECCCCC
GNVGFVNQRWCDYTGMSVEQACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKR
CCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
FDGIYRWFLIRAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVST
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DEITWSDEVYRILELDPDTPPGFEAIYRRVHPDDISSHREMIKRQRRKGRDFEHEHRLLM
CCEEEHHHHEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEC
PDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEVLSKARSELTHLARVASLGAV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASIAHEVNQPLAGIITNASTCLRMLGADPPNVEGARETARRTIRDGNRAADVINRLRAL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
FSKKSITIEDVNLNDAAREVIAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNL
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCCCCCHHHHHHHHHHH
IMNAAEAMSAIHGRPRQLIVSTDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSG
HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
MGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTDLPQTDNRDLADRTVEND
CCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MRIDMTNEQERVIEDGPDRGSDATMPAPGVDSIIDSIPAMVAFMTPSGELEQVNRQIMDY
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
IGAPLHELKKWQAGETVHPDDLPSVIAAWMHSVSTGTPYEIEHRIRRADGVYRWFHVRGL
HCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEECC
PIRNSEGTITRWCVLQVDIDERRRDKALIASALAEVSASEERLRGIIDAVPGFVWSASPE
EEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEECCCCC
GNVGFVNQRWCDYTGMSVEQACGDGWTASIHPDDAPGLGGYWQALLQSGSAGEYEARLKR
CCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
FDGIYRWFLIRAVPQRDDTGRVVRWYGENTDIEDRKRAEVFLAKAQRLSATGTFSWRVST
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DEITWSDEVYRILELDPDTPPGFEAIYRRVHPDDISSHREMIKRQRRKGRDFEHEHRLLM
CCEEEHHHHEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEC
PDGTVKYVRLVAHSIAHAPDGFEYIAALQDITQRRLAEEVLSKARSELTHLARVASLGAV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASIAHEVNQPLAGIITNASTCLRMLGADPPNVEGARETARRTIRDGNRAADVINRLRAL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
FSKKSITIEDVNLNDAAREVIAMLLGELQRNGVVLHPQFAEALPLVRGDRVQLQQVILNL
HCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCCCCCHHHHHHHHHHH
IMNAAEAMSAIHGRPRQLIVSTDLGSDENVYLAVKDSGNGVDPQDIERIFNAFYTTKSSG
HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
MGVGLSISRSIIERHDGKLWASANDGPGATFTFAIPHSTDLPQTDNRDLADRTVEND
CCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]