| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pcaK [H]
Identifier: 77458480
GI number: 77458480
Start: 2585720
End: 2586949
Strand: Reverse
Name: pcaK [H]
Synonym: Pfl01_2253
Alternate gene names: 77458480
Gene position: 2586949-2585720 (Counterclockwise)
Preceding gene: 77458485
Following gene: 77458478
Centisome position: 40.18
GC content: 63.82
Gene sequence:
>1230_bases ATGCGTGGGGAAACAGCGCTCGAACGCCTGAGCGGCACGCCATCGACCACTTCGCCGTGGTGGGTGATCGGGCTGTGCAT GCTGTTCAACGTGATCGACGGGCTTGATGTGATGGCCATGGCCTTCACCGCCAGCCGGGTTGCGGCGGAGTGGGCGTTGA GCGGCGCGCAACTGGGCCTGTTGCTGAGCGCAAGTCTGGTCGGGATGGCGCTTGGTTCGCTGCTGGCCGCGCCCAGGGCC GACCGCTTCGGGCGCAGGCCTTTGCTGCTTGGCGGTCTGCTGCTCAGCGGCCTGAGCATGTTGCTGTCGTTCTGGAGCCC GGATCACCACGTATTGATGCTTCTGCGATTGCTGACCGGCATCGGCACCGGGGCGGTGCTGGTGGGGGCGAATGTGCTGA CGTTCGAACACGCCAGCCCGCTACGGCGCAATCTGGCCATCGCATTGCAATCCCTCGCCTTTGCCATGGGCGCCAGTCTG GGCGGTGTGCTGGCGCATGTACTGAATGAATCCGTTGGCTGGCGGTATGTCTTTCTTGCCGGAGGTTGCATCACGCTGGC GGCCGCGCTTGCCGGCGTCTTTTGGCTGCGAGAGTCGCCGTCATTTCTGGCACTCGAACGCCGCACGCCAATCGCTACAG CGTCGCCTGACAACCCCAGCCGACCGCTTTTGCCCGGTCAGTGGCAACAGACCACATCGCTGGCACTGGCACTCTTTCTG TTGATGTTCTGCTTTTACTTCGTCATGAGCTGGACCCCGAGCCTGCTGGTCCACAACGGCTTTACTGATCGGCAAGGCGC ACGTATCGGGGTGCTGTTGGCTTCTGGAGGTATGCTCGGCGCGCTGCTGCTGGGGCTGGCAGCCAATCGTTTCGGCTGCC GGCGATTGTTGTCGGGTTTTCTGCTGCTCAACGCCGCCCTGCTGCCCCTGATGGTGCCGGCCTCTCACGTACCCGGTGTG GCTGCGCTCGTGGCGGTTACGCTCGGCCTGATGCTCAACGGTGCAGTCGCCGCCCTGTATGTCCTGGCTCCTCAAGCGTT CTGCACCTCGGTTCGTACGACCGGTGTCGGCGTGGTGCTGGGGATGGGGCGTCTGGGGGCGATCATTTCGCCGCTGGTCG CCGGTTTTCTGCTGGATGCCGGATGGACCGCACAACACCTGTTCACGTTTTTCGCCGGTAGCCAGGTGTTGGCGGCCCTG CTGATCTGGCGTGGCACTAAGGGACGATGA
Upstream 100 bases:
>100_bases CCCGGCGCGCAAAATCGCGCTCGAACTCAGCAGCGGTTAACGGGCAGAATGCGGCGGGGAAAAGACCCATTTGAATCACA GAGCGGAACAAGGATTGCGA
Downstream 100 bases:
>100_bases TCAGCTTGCCCGTCGTGTTGCGCGACTCGATATCAATATGGGCCTGTTGTGCTTCGTCCAGCGAATAACGCTTGCCGATG AAGGTTTTCAGTTTGCCGGT
Product: general substrate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRGETALERLSGTPSTTSPWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALSGAQLGLLLSASLVGMALGSLLAAPRA DRFGRRPLLLGGLLLSGLSMLLSFWSPDHHVLMLLRLLTGIGTGAVLVGANVLTFEHASPLRRNLAIALQSLAFAMGASL GGVLAHVLNESVGWRYVFLAGGCITLAAALAGVFWLRESPSFLALERRTPIATASPDNPSRPLLPGQWQQTTSLALALFL LMFCFYFVMSWTPSLLVHNGFTDRQGARIGVLLASGGMLGALLLGLAANRFGCRRLLSGFLLLNAALLPLMVPASHVPGV AALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVLGMGRLGAIISPLVAGFLLDAGWTAQHLFTFFAGSQVLAAL LIWRGTKGR
Sequences:
>Translated_409_residues MRGETALERLSGTPSTTSPWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALSGAQLGLLLSASLVGMALGSLLAAPRA DRFGRRPLLLGGLLLSGLSMLLSFWSPDHHVLMLLRLLTGIGTGAVLVGANVLTFEHASPLRRNLAIALQSLAFAMGASL GGVLAHVLNESVGWRYVFLAGGCITLAAALAGVFWLRESPSFLALERRTPIATASPDNPSRPLLPGQWQQTTSLALALFL LMFCFYFVMSWTPSLLVHNGFTDRQGARIGVLLASGGMLGALLLGLAANRFGCRRLLSGFLLLNAALLPLMVPASHVPGV AALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVLGMGRLGAIISPLVAGFLLDAGWTAQHLFTFFAGSQVLAAL LIWRGTKGR >Mature_409_residues MRGETALERLSGTPSTTSPWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALSGAQLGLLLSASLVGMALGSLLAAPRA DRFGRRPLLLGGLLLSGLSMLLSFWSPDHHVLMLLRLLTGIGTGAVLVGANVLTFEHASPLRRNLAIALQSLAFAMGASL GGVLAHVLNESVGWRYVFLAGGCITLAAALAGVFWLRESPSFLALERRTPIATASPDNPSRPLLPGQWQQTTSLALALFL LMFCFYFVMSWTPSLLVHNGFTDRQGARIGVLLASGGMLGALLLGLAANRFGCRRLLSGFLLLNAALLPLMVPASHVPGV AALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVLGMGRLGAIISPLVAGFLLDAGWTAQHLFTFFAGSQVLAAL LIWRGTKGR
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87081723, Length=362, Percent_Identity=32.8729281767956, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI87082404, Length=359, Percent_Identity=22.2841225626741, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788068, Length=345, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082159, Length=368, Percent_Identity=23.0978260869565, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32564663, Length=171, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI19922616, Length=385, Percent_Identity=24.6753246753247, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922874, Length=405, Percent_Identity=24.9382716049383, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42956; Mature: 42956
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGETALERLSGTPSTTSPWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALSGAQLGL CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHH LLSASLVGMALGSLLAAPRADRFGRRPLLLGGLLLSGLSMLLSFWSPDHHVLMLLRLLTG HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC IGTGAVLVGANVLTFEHASPLRRNLAIALQSLAFAMGASLGGVLAHVLNESVGWRYVFLA CCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC GGCITLAAALAGVFWLRESPSFLALERRTPIATASPDNPSRPLLPGQWQQTTSLALALFL CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LMFCFYFVMSWTPSLLVHNGFTDRQGARIGVLLASGGMLGALLLGLAANRFGCRRLLSGF HHHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LLLNAALLPLMVPASHVPGVAALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GMGRLGAIISPLVAGFLLDAGWTAQHLFTFFAGSQVLAALLIWRGTKGR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRGETALERLSGTPSTTSPWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALSGAQLGL CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHH LLSASLVGMALGSLLAAPRADRFGRRPLLLGGLLLSGLSMLLSFWSPDHHVLMLLRLLTG HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC IGTGAVLVGANVLTFEHASPLRRNLAIALQSLAFAMGASLGGVLAHVLNESVGWRYVFLA CCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC GGCITLAAALAGVFWLRESPSFLALERRTPIATASPDNPSRPLLPGQWQQTTSLALALFL CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LMFCFYFVMSWTPSLLVHNGFTDRQGARIGVLLASGGMLGALLLGLAANRFGCRRLLSGF HHHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LLLNAALLPLMVPASHVPGVAALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GMGRLGAIISPLVAGFLLDAGWTAQHLFTFFAGSQVLAALLIWRGTKGR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]