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The map label for this gene is nodW [H]

Identifier: 77458477

GI number: 77458477

Start: 2582097

End: 2582468

Strand: Reverse

Name: nodW [H]

Synonym: Pfl01_2250

Alternate gene names: 77458477

Gene position: 2582468-2582097 (Counterclockwise)

Preceding gene: 77458478

Following gene: 77458476

Centisome position: 40.11

GC content: 59.95

Gene sequence:

>372_bases
ATGGGTACGCCTTTGCTCGTATCGGTGGTCGATGACGACGAATCGGTTCGTGAATCACTGCCTGACCTGATCAAGGAATT
CGGCTTTGCCGTCCAGGCATTTGCCTCGGCGCAGGCGTTTCTGGCATCGCCCTATCTGGACCTGACCCATTGCCTGATTC
TCGACGTGGCCATGCCCGGCATGTCCGGCCCGGATCTGCAACGCGAGCTGCTGCGCCGTGGCTATCGCATTCCGGTGATT
TTCATCACTGCTCACAGCGACGCCAGCGAACAGGCGAAGCTGCTGAACAGTGGCGCCGTAGAGTGCCTGTTCAAACCGTT
CAGCGAAGCCCAATTGCTCAAGGCCCTGAGCGCCGCCCTGCCCCTCGATTGA

Upstream 100 bases:

>100_bases
ACGGCCCGGGAGCGACGTTTACCTTTGCCATCCCGCATTCGACAGACTTGCCGCAAACCGATAACCGCGACCTCGCCGAT
CGCACCGTGGAGAATGATTG

Downstream 100 bases:

>100_bases
GCGTGAAGCCGAACAGAACAAGGAATCGACATGTTGAACGCGAACAACGCAATCGCCCCTTCCCGTGGAGCATTACCGAT
GAGTGAGGTCACGCCCGTCG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MGTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTHCLILDVAMPGMSGPDLQRELLRRGYRIPVI
FITAHSDASEQAKLLNSGAVECLFKPFSEAQLLKALSAALPLD

Sequences:

>Translated_123_residues
MGTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTHCLILDVAMPGMSGPDLQRELLRRGYRIPVI
FITAHSDASEQAKLLNSGAVECLFKPFSEAQLLKALSAALPLD
>Mature_122_residues
GTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTHCLILDVAMPGMSGPDLQRELLRRGYRIPVIF
ITAHSDASEQAKLLNSGAVECLFKPFSEAQLLKALSAALPLD

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process [H]

COG id: COG4566

COG function: function code T; Response regulator

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=116, Percent_Identity=30.1724137931034, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13306; Mature: 13174

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTHCLILDVAMPG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
MSGPDLQRELLRRGYRIPVIFITAHSDASEQAKLLNSGAVECLFKPFSEAQLLKALSAAL
CCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHC
PLD
CCC
>Mature Secondary Structure 
GTPLLVSVVDDDESVRESLPDLIKEFGFAVQAFASAQAFLASPYLDLTHCLILDVAMPG
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
MSGPDLQRELLRRGYRIPVIFITAHSDASEQAKLLNSGAVECLFKPFSEAQLLKALSAAL
CCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHC
PLD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]