| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is ilvA [H]
Identifier: 77458452
GI number: 77458452
Start: 2547930
End: 2548886
Strand: Direct
Name: ilvA [H]
Synonym: Pfl01_2225
Alternate gene names: 77458452
Gene position: 2547930-2548886 (Clockwise)
Preceding gene: 77458449
Following gene: 77458453
Centisome position: 39.57
GC content: 59.67
Gene sequence:
>957_bases ATGCACGTATTCACTCGCGACGACATCGAAAACGCCGCCCGCCAGGTTTATCAGGTGATGTCGGCCACCGCCCAATACCG TTGGCCATTGCTCGCCGAGCGGTTGGGCTGCACCGTTTGGGTCAAGCATGAAAACCACACGCCGACCGGCGCCTTCAAAG TGCGTGGCGGTATTACCTTTATGCACTGGCTGCGTCGTGAGCATCCGACTGTCAAAGGCATCGTTTCTGCGACACGTGGC AATCACGGTCAGAGTCTGGCGCTGGCGGCGCGGGCCGTGGGACTGAAAGCGTTGATCGTGGTGCCGCAGGGCAACTCGCT GGAGAAGAACAACGCCATGCGTGGCTTTGGTGGTGAAGTGGTCGAATACGGGCGCGATTTTGACGAGGCTCGTGAAGAGG CGGCGCGCCTGGCACAGAAGCACGACCTTTTTCTGGTGCCACCGTTTCACGTTGAACTGGTCAAGGGCGTAGCGACCTAT GCGCTGGAGCTGTTCGGTGCGGCGCCGGATCTGGATACGGTTTACGTGCCCATTGGTTGCGGATCGGGGATCTGTGGTGT GATCGCTGCCCGCGACGCCCTAGGACTGAATACCGAAGTGGTGGGGGTGGTGTCGACAGAGGCCGCGGCCGCCAAGCTGT CGTTTGAAGCGAACGCGATTTGCGAAACCGCTTCGGCGAATACGTTCGCGGATGGTTTGGCTGTTCGCAAGCCGATTGCG CAGGCGTTCGATATCTATAAAGAAGGGGCGGCGAGGATTCTCTCGGTCAGCGAAGTTGAGATTGCCGAAGCCATGCGCGT GTATTACACCGACACCCACAATCTTGCGGAGGGCGCGGGTGCCGCAGCGTTGGCGGCGTTGATGCAGGATCGGGGGAGGA TGGAGGGGAAAAAGGTCGGGGTGGTTCTGTCCGGAGGGAATATTGACCGATCGGTGTATGCAAAGGTGATTGGTTGA
Upstream 100 bases:
>100_bases AATAGTAGTGAAGGGGGCGGGTAAAAGTCAGGTCGGTTTTTTGAAAGCCGACGTGATGCGTCCGTGCCTAGACTGGGCCA ACGTCCAAGGAGCCACTTAT
Downstream 100 bases:
>100_bases TTGCTGATGTGCTGGTTGGCGGGCTTGGCATTCACTGACAGCAATTCGTTCGCGTCTAACATAGAAGCGGCCTTTTTCAT TTCTTGATAGAAAAAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MHVFTRDDIENAARQVYQVMSATAQYRWPLLAERLGCTVWVKHENHTPTGAFKVRGGITFMHWLRREHPTVKGIVSATRG NHGQSLALAARAVGLKALIVVPQGNSLEKNNAMRGFGGEVVEYGRDFDEAREEAARLAQKHDLFLVPPFHVELVKGVATY ALELFGAAPDLDTVYVPIGCGSGICGVIAARDALGLNTEVVGVVSTEAAAAKLSFEANAICETASANTFADGLAVRKPIA QAFDIYKEGAARILSVSEVEIAEAMRVYYTDTHNLAEGAGAAALAALMQDRGRMEGKKVGVVLSGGNIDRSVYAKVIG
Sequences:
>Translated_318_residues MHVFTRDDIENAARQVYQVMSATAQYRWPLLAERLGCTVWVKHENHTPTGAFKVRGGITFMHWLRREHPTVKGIVSATRG NHGQSLALAARAVGLKALIVVPQGNSLEKNNAMRGFGGEVVEYGRDFDEAREEAARLAQKHDLFLVPPFHVELVKGVATY ALELFGAAPDLDTVYVPIGCGSGICGVIAARDALGLNTEVVGVVSTEAAAAKLSFEANAICETASANTFADGLAVRKPIA QAFDIYKEGAARILSVSEVEIAEAMRVYYTDTHNLAEGAGAAALAALMQDRGRMEGKKVGVVLSGGNIDRSVYAKVIG >Mature_318_residues MHVFTRDDIENAARQVYQVMSATAQYRWPLLAERLGCTVWVKHENHTPTGAFKVRGGITFMHWLRREHPTVKGIVSATRG NHGQSLALAARAVGLKALIVVPQGNSLEKNNAMRGFGGEVVEYGRDFDEAREEAARLAQKHDLFLVPPFHVELVKGVATY ALELFGAAPDLDTVYVPIGCGSGICGVIAARDALGLNTEVVGVVSTEAAAAKLSFEANAICETASANTFADGLAVRKPIA QAFDIYKEGAARILSVSEVEIAEAMRVYYTDTHNLAEGAGAAALAALMQDRGRMEGKKVGVVLSGGNIDRSVYAKVIG
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=311, Percent_Identity=28.2958199356913, Blast_Score=101, Evalue=7e-22, Organism=Escherichia coli, GI1790207, Length=297, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789505, Length=315, Percent_Identity=29.8412698412698, Blast_Score=113, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71991565, Length=312, Percent_Identity=27.8846153846154, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17537387, Length=312, Percent_Identity=30.4487179487179, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17508781, Length=280, Percent_Identity=28.2142857142857, Blast_Score=100, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322631, Length=319, Percent_Identity=31.0344827586207, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6320930, Length=278, Percent_Identity=30.2158273381295, Blast_Score=118, Evalue=1e-27, Organism=Drosophila melanogaster, GI21355833, Length=284, Percent_Identity=30.9859154929577, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24645328, Length=219, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 34038; Mature: 34038
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVFTRDDIENAARQVYQVMSATAQYRWPLLAERLGCTVWVKHENHTPTGAFKVRGGITF CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCEEEEECCHHH MHWLRREHPTVKGIVSATRGNHGQSLALAARAVGLKALIVVPQGNSLEKNNAMRGFGGEV HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHH VEYGRDFDEAREEAARLAQKHDLFLVPPFHVELVKGVATYALELFGAAPDLDTVYVPIGC HHHCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GSGICGVIAARDALGLNTEVVGVVSTEAAAAKLSFEANAICETASANTFADGLAVRKPIA CCCHHHHHHHHHHCCCCCEEEEEEECCHHHHEEECCCHHHCCCCCCCHHHHHHHHHHHHH QAFDIYKEGAARILSVSEVEIAEAMRVYYTDTHNLAEGAGAAALAALMQDRGRMEGKKVG HHHHHHHHHHHHEEEHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCEEE VVLSGGNIDRSVYAKVIG EEEECCCCCHHHHHEECC >Mature Secondary Structure MHVFTRDDIENAARQVYQVMSATAQYRWPLLAERLGCTVWVKHENHTPTGAFKVRGGITF CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCEEEEECCHHH MHWLRREHPTVKGIVSATRGNHGQSLALAARAVGLKALIVVPQGNSLEKNNAMRGFGGEV HHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHH VEYGRDFDEAREEAARLAQKHDLFLVPPFHVELVKGVATYALELFGAAPDLDTVYVPIGC HHHCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GSGICGVIAARDALGLNTEVVGVVSTEAAAAKLSFEANAICETASANTFADGLAVRKPIA CCCHHHHHHHHHHCCCCCEEEEEEECCHHHHEEECCCHHHCCCCCCCHHHHHHHHHHHHH QAFDIYKEGAARILSVSEVEIAEAMRVYYTDTHNLAEGAGAAALAALMQDRGRMEGKKVG HHHHHHHHHHHHEEEHHHHHHHHHHEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCEEE VVLSGGNIDRSVYAKVIG EEEECCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]