| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458449
Identifier: 77458449
GI number: 77458449
Start: 2545431
End: 2545922
Strand: Direct
Name: 77458449
Synonym: Pfl01_2222
Alternate gene names: NA
Gene position: 2545431-2545922 (Clockwise)
Preceding gene: 77458448
Following gene: 77458452
Centisome position: 39.54
GC content: 57.52
Gene sequence:
>492_bases GTGCTCTATCTATGCCTCAAATACATTCACATCATCGCCGCGGTTTTTCTGTTCGGATTCGGCATGGGGTCGTACCTCTA CCTGATCGCCGCGAGCCGTACAGCCAACCCTCTGGTGATCGCGCACGTGGCGAGAATGGTCGTACGGTTCGACGCCTGGA TCACCACGCCGGCGGGCTTTATTCAGATCGCTACGGGATACGGGTTGACCAGGCTTGCCGGAATGCCCTTGACCACGGAG TGGGTACTGACGTCCTTGATCATTTTTCTGTGCGTCGGCTCCCTCTGGTTGCCGGTTTTGGTGCTTCAGAAGCGTTTGTA CGTGATGGCTTCAAGCGCAGTCGAGACTGGGGCAGGGCTCGCTGATGACTACCGCTGCGTGTATCGAAAGTGGTTCTGGA TGGGTGTTGCCGGTTTTCTGGGGATGTTCGTGATCGTGCTGCTGATGGTGACGAAGATGACGCCGGGGCAGTGGGCCGAC CTGTTGGTGTAG
Upstream 100 bases:
>100_bases CTTGTGTAGGAGAGATCAGCGTTGACGAGTACATGGCGGCCATCAACGATCCGCAGAATCTGAGCCTGTCGATGCATTTC TCTGACGGGCAGAACTGACC
Downstream 100 bases:
>100_bases CGAACGCAACGCCCGATACACCCGCACCGGACGTCGCGTCGTATCAGGTGAAGCTTAATCCAGATCGCTCGCCTGATGCC GCTCCGCAACCTGGCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD LLV
Sequences:
>Translated_163_residues MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD LLV >Mature_163_residues MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD LLV
Specific function: Unknown
COG id: COG5528
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18126; Mature: 18126
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGF CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH IQIATGYGLTRLAGMPLTTEWVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGL EEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWADLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGF CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH IQIATGYGLTRLAGMPLTTEWVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGL EEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWADLLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA