Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458449

Identifier: 77458449

GI number: 77458449

Start: 2545431

End: 2545922

Strand: Direct

Name: 77458449

Synonym: Pfl01_2222

Alternate gene names: NA

Gene position: 2545431-2545922 (Clockwise)

Preceding gene: 77458448

Following gene: 77458452

Centisome position: 39.54

GC content: 57.52

Gene sequence:

>492_bases
GTGCTCTATCTATGCCTCAAATACATTCACATCATCGCCGCGGTTTTTCTGTTCGGATTCGGCATGGGGTCGTACCTCTA
CCTGATCGCCGCGAGCCGTACAGCCAACCCTCTGGTGATCGCGCACGTGGCGAGAATGGTCGTACGGTTCGACGCCTGGA
TCACCACGCCGGCGGGCTTTATTCAGATCGCTACGGGATACGGGTTGACCAGGCTTGCCGGAATGCCCTTGACCACGGAG
TGGGTACTGACGTCCTTGATCATTTTTCTGTGCGTCGGCTCCCTCTGGTTGCCGGTTTTGGTGCTTCAGAAGCGTTTGTA
CGTGATGGCTTCAAGCGCAGTCGAGACTGGGGCAGGGCTCGCTGATGACTACCGCTGCGTGTATCGAAAGTGGTTCTGGA
TGGGTGTTGCCGGTTTTCTGGGGATGTTCGTGATCGTGCTGCTGATGGTGACGAAGATGACGCCGGGGCAGTGGGCCGAC
CTGTTGGTGTAG

Upstream 100 bases:

>100_bases
CTTGTGTAGGAGAGATCAGCGTTGACGAGTACATGGCGGCCATCAACGATCCGCAGAATCTGAGCCTGTCGATGCATTTC
TCTGACGGGCAGAACTGACC

Downstream 100 bases:

>100_bases
CGAACGCAACGCCCGATACACCCGCACCGGACGTCGCGTCGTATCAGGTGAAGCTTAATCCAGATCGCTCGCCTGATGCC
GCTCCGCAACCTGGCTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Transmembrane Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE
WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD
LLV

Sequences:

>Translated_163_residues
MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE
WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD
LLV
>Mature_163_residues
MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGFIQIATGYGLTRLAGMPLTTE
WVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGLADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWAD
LLV

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18126; Mature: 18126

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGF
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
IQIATGYGLTRLAGMPLTTEWVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGL
EEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWADLLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MLYLCLKYIHIIAAVFLFGFGMGSYLYLIAASRTANPLVIAHVARMVVRFDAWITTPAGF
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
IQIATGYGLTRLAGMPLTTEWVLTSLIIFLCVGSLWLPVLVLQKRLYVMASSAVETGAGL
EEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDYRCVYRKWFWMGVAGFLGMFVIVLLMVTKMTPGQWADLLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA