| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458437
Identifier: 77458437
GI number: 77458437
Start: 2495895
End: 2496689
Strand: Reverse
Name: 77458437
Synonym: Pfl01_2210
Alternate gene names: NA
Gene position: 2496689-2495895 (Counterclockwise)
Preceding gene: 77458443
Following gene: 77458436
Centisome position: 38.78
GC content: 61.89
Gene sequence:
>795_bases ATGAATCTGACCGGCAGTCTTCGCAACATGGAAAATCCGCACTTTTATTGGCAGTTGGGGGAGTTGATCGCCAGCACCGG CAACGAGCGTTTTGCCACGAACATGTTCCAGCTGGTCGACAACCTTGTGCCGGTCAATCGCGTCCATCTCAGTGAGTGGA CCCTGGATGAACGGGAGTCCAGCGTGGTCGAGATCAAGGCGTTGGGCAGCGCGGGGTTGCCGGACACCTTCCCGCCCCCG GATCCGCTGCAGCACCCGGACGACCATCCGCTGCTGCAACAGATGATCGAGATGAACGACTCGCTACTGATTCAACTGAA AGCCTCGCTCCAGCATCGGCATCCGCACCACAGTGTCCACCAATGCAATCTGGTGTCCCGCACGTCCAACCGCCGTTGCG TTATCTCGTTCTACCGTCCCCACACGCATCGGGTGTTCTCTCTGCCGGAGCTGTCGTTCCTCAAGCGCCTGTCCGACACC CTGCTGCCCTTGATCGAGCGCCACGCGCACATCAGTCGACAAGCCATCGCCCGCCAACCCCGCGCGCCACAAGCCGATCA ACCACAGACGCCGCTGCAACAGGTGTTCGACGAACGCCTGGCGTTGGGCGACATCACCTTGTCAGTGCGTGAGAAAGAGG TCTGCCTGGGCCTGCTGACCGGCGGCACCGTGCCGCAGATGGCCGAACGGTTGCGGGTCAAGAACAGCTCGATCGAGACC TACCTCAAGCGCGCGGCCGCCAAGCTTGGGGTCAGCGGCCGTCACGGTCTGGCGAAATGGATGGCCGGAGCCTGA
Upstream 100 bases:
>100_bases GCTCCAGACGATTTCAAGGAGAAAAGGCTGGGTGGGCGTTTCACGGGTGCATGCACGGCAGACGATTCGGCAATGGCTCT AAATCAGGGATGACAAGGAT
Downstream 100 bases:
>100_bases TCCGGCGTTTTTCTCATCACGGGCGCCCGGCGTCCGCTCTCATTCGTGAACGAGGCTGTTTGATGCCCAGGTTGCCGATT TCCCTGCTGACCGCCGCGCT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein LuxR; LuxR Family Regulatory Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator SyrR
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHLSEWTLDERESSVVEIKALGSAGLPDTFPPP DPLQHPDDHPLLQQMIEMNDSLLIQLKASLQHRHPHHSVHQCNLVSRTSNRRCVISFYRPHTHRVFSLPELSFLKRLSDT LLPLIERHAHISRQAIARQPRAPQADQPQTPLQQVFDERLALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIET YLKRAAAKLGVSGRHGLAKWMAGA
Sequences:
>Translated_264_residues MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHLSEWTLDERESSVVEIKALGSAGLPDTFPPP DPLQHPDDHPLLQQMIEMNDSLLIQLKASLQHRHPHHSVHQCNLVSRTSNRRCVISFYRPHTHRVFSLPELSFLKRLSDT LLPLIERHAHISRQAIARQPRAPQADQPQTPLQQVFDERLALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIET YLKRAAAKLGVSGRHGLAKWMAGA >Mature_264_residues MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHLSEWTLDERESSVVEIKALGSAGLPDTFPPP DPLQHPDDHPLLQQMIEMNDSLLIQLKASLQHRHPHHSVHQCNLVSRTSNRRCVISFYRPHTHRVFSLPELSFLKRLSDT LLPLIERHAHISRQAIARQPRAPQADQPQTPLQQVFDERLALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIET YLKRAAAKLGVSGRHGLAKWMAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29822; Mature: 29822
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHLSEWTLDERES CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC SVVEIKALGSAGLPDTFPPPDPLQHPDDHPLLQQMIEMNDSLLIQLKASLQHRHPHHSVH CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHCCCCCCHH QCNLVSRTSNRRCVISFYRPHTHRVFSLPELSFLKRLSDTLLPLIERHAHISRQAIARQP HHHHHHCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAPQADQPQTPLQQVFDERLALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIET CCCCCCCCCCHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH YLKRAAAKLGVSGRHGLAKWMAGA HHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MNLTGSLRNMENPHFYWQLGELIASTGNERFATNMFQLVDNLVPVNRVHLSEWTLDERES CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC SVVEIKALGSAGLPDTFPPPDPLQHPDDHPLLQQMIEMNDSLLIQLKASLQHRHPHHSVH CEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHCCCCCCHH QCNLVSRTSNRRCVISFYRPHTHRVFSLPELSFLKRLSDTLLPLIERHAHISRQAIARQP HHHHHHCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAPQADQPQTPLQQVFDERLALGDITLSVREKEVCLGLLTGGTVPQMAERLRVKNSSIET CCCCCCCCCCHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH YLKRAAAKLGVSGRHGLAKWMAGA HHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA