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The map label for this gene is 77458435

Identifier: 77458435

GI number: 77458435

Start: 2493657

End: 2494262

Strand: Reverse

Name: 77458435

Synonym: Pfl01_2208

Alternate gene names: NA

Gene position: 2494262-2493657 (Counterclockwise)

Preceding gene: 77458436

Following gene: 77458434

Centisome position: 38.74

GC content: 59.41

Gene sequence:

>606_bases
ATGACGGTTTTGTTGACTCGCCGCAAGGTGCTTGCGGGAATGGGCGTACTCGGTCTCGGCCTGCTCGCCGGCTGCGACAC
CCGCGGCGAACTGTCGTACAAGTACGGCAAGGATCTGAGCGACAAGATCCTCGGACGCACCTTCAAGCTCAAGGACACCG
AAGGCAACACCGTGACGCTGTCGAGCTTTCGCGGCCTGATGCCGATGATCTTCTTCGGTTTCACCCAGTGCCCGGCGATC
TGCCCGACGACGCTGGCCCGCGCCGCGAAAATCAAGAAGCTGATGGGCAAGGACGGTGACATCCTGCAGGTGGTGTTCAT
CACCCTCGACCCGGAACGCGACACCCCGGAAATCCTCGACGCCTACGTCAAGACCTTCGATCCAAGCTTCGTCGCGCTGT
ACGGCACCCTCGAAGAAACCAAGGCCACCGCCAAGGAATTCGACGTGTTCTACGAAAAAATCCCGGCCGGCGACACCTAT
ACCCTTTCCCACACCGCCACCAGTTATGTCTACGACACCCGGGGCACATTGCGTGTGGGCCTGTCTCAATCGCTTTCTGC
ACAAGAGTGCACGGAAGATTTGCTTACCGTCATGGAGGTCTGCTGA

Upstream 100 bases:

>100_bases
GAAAACCGGCGCAGCGGATCATTTTGGTATCATGCGCCGCTTTTACGGTTAACCCGCCCGCCTGTCCTGCCGACCGGCGG
GCTCCAAAGGGCGGTATGAA

Downstream 100 bases:

>100_bases
TGAACCCTTTTCTGAACCACATCAAACGCGCCGCACTGGGCCTGTCCCTGCTGGGCCTGGCTTTCCAGGTATCGGCGCAG
ACCAAAGTCGACGACGCCTG

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTVLLTRRKVLAGMGVLGLGLLAGCDTRGELSYKYGKDLSDKILGRTFKLKDTEGNTVTLSSFRGLMPMIFFGFTQCPAI
CPTTLARAAKIKKLMGKDGDILQVVFITLDPERDTPEILDAYVKTFDPSFVALYGTLEETKATAKEFDVFYEKIPAGDTY
TLSHTATSYVYDTRGTLRVGLSQSLSAQECTEDLLTVMEVC

Sequences:

>Translated_201_residues
MTVLLTRRKVLAGMGVLGLGLLAGCDTRGELSYKYGKDLSDKILGRTFKLKDTEGNTVTLSSFRGLMPMIFFGFTQCPAI
CPTTLARAAKIKKLMGKDGDILQVVFITLDPERDTPEILDAYVKTFDPSFVALYGTLEETKATAKEFDVFYEKIPAGDTY
TLSHTATSYVYDTRGTLRVGLSQSLSAQECTEDLLTVMEVC
>Mature_200_residues
TVLLTRRKVLAGMGVLGLGLLAGCDTRGELSYKYGKDLSDKILGRTFKLKDTEGNTVTLSSFRGLMPMIFFGFTQCPAIC
PTTLARAAKIKKLMGKDGDILQVVFITLDPERDTPEILDAYVKTFDPSFVALYGTLEETKATAKEFDVFYEKIPAGDTYT
LSHTATSYVYDTRGTLRVGLSQSLSAQECTEDLLTVMEVC

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=155, Percent_Identity=30.3225806451613, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI281182722, Length=155, Percent_Identity=30.3225806451613, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI281182716, Length=155, Percent_Identity=30.3225806451613, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI153791313, Length=155, Percent_Identity=30.3225806451613, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI4759068, Length=166, Percent_Identity=30.7228915662651, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531419, Length=152, Percent_Identity=30.2631578947368, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6319511, Length=152, Percent_Identity=36.1842105263158, Blast_Score=96, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6319498, Length=161, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19920710, Length=193, Percent_Identity=28.4974093264249, Blast_Score=98, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22101; Mature: 21970

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLTRRKVLAGMGVLGLGLLAGCDTRGELSYKYGKDLSDKILGRTFKLKDTEGNTVTL
CEEEEEHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCEEEH
SSFRGLMPMIFFGFTQCPAICPTTLARAAKIKKLMGKDGDILQVVFITLDPERDTPEILD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
AYVKTFDPSFVALYGTLEETKATAKEFDVFYEKIPAGDTYTLSHTATSYVYDTRGTLRVG
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEC
LSQSLSAQECTEDLLTVMEVC
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVLLTRRKVLAGMGVLGLGLLAGCDTRGELSYKYGKDLSDKILGRTFKLKDTEGNTVTL
EEEEEHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCEEEH
SSFRGLMPMIFFGFTQCPAICPTTLARAAKIKKLMGKDGDILQVVFITLDPERDTPEILD
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHH
AYVKTFDPSFVALYGTLEETKATAKEFDVFYEKIPAGDTYTLSHTATSYVYDTRGTLRVG
HHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEC
LSQSLSAQECTEDLLTVMEVC
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]