| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is iorB [H]
Identifier: 77458401
GI number: 77458401
Start: 2454579
End: 2456741
Strand: Direct
Name: iorB [H]
Synonym: Pfl01_2174
Alternate gene names: 77458401
Gene position: 2454579-2456741 (Clockwise)
Preceding gene: 77458400
Following gene: 77458402
Centisome position: 38.12
GC content: 63.85
Gene sequence:
>2163_bases ATGAATAGTCCAGTATCCCGTCGCGGATTTCTCAAGGGCAGCGCCGTGCTGGGCGGTGGTCTGGTGGTGGCGTTCGTGGT GCCTGGCGGCAACCGCTTTGCCATGGCGGCCGAGAATGAAGGCAAGGTGTTTGCGCCGAACGCGTTCCTGCGGATTGCAG CGGACAACAGCGTGACCGTGCTGCTCGGCCATTCGGAAATGGGCCAGGGCATCTGGACCGGCCTGACCATGTTGATCGCC GAAGAGCTGGACGCCGACTGGTCGAAAATCCGCGTCGAGCATTCCCCGGCTTCGGCCGCCGATTACGGCATGCCGGCGTT TGGCGGGATGCAGATTACCGGCGGCTCCACTTCAACCTGGATGGAATTCGACCGTTACCGGCTCGCCGGCGCCACCGCCC GGCAGATGCTGATCGAGGCGGCGGCCAAGCGCTTCAACGTGGCGCCGTCGACAATCCGCACCGAATCCGGCGTGGTGATT GCCGGCGACAACCGCGCCACCTACGGCGAACTGGCGGACGCCGCCGGGCAACTGCCGGTGCCGGATCCGAAGTCGATCAC CTTTAAAGAAGCCAAGGACTGGAAAGTCATCGGCAAACCCACCAAACGCCTCGACACCCCGGAAAAAATCACCGGTCGCG CCAAGTTCGGTATGGACGTGCAGTTTGAGGGATTGATGACGGCGATGGTCGCTAGGGCGCCGACGTTTGGCGCCACGGTG AAATCCTTTGAAGGCGCTGATGCGTTGGCGATCCCCGGCGTGCACAAAGTGGTGCAAGTGCCGACCGGTGTAGCCGTGGT CGCCGAGCATTACTGGGCGGCGAAACTGGGGCGCGATGCGCTGAAGGTCGATTGGGACCTGGGGCCGAACGCTGATTTGA GCAGTGAAAAGCTGTTGGCGAGTTTCCGCAAACTGGCGGCCACCCCGGGCACCTCGGCGGCGCAGGCCGGCGATGCCAAG GGCAACTTCGGCAAGGCAGCGAAGAAAATCGATGTCGAATACAGTGTGCCGTACCTGGCCCACGCGCCGATGGAGCCGCT CAACTGCACGGTGAAGATCAGCGCCGACAAGTGCGAGATCTGGACCGGCACCCAGTTCCAGACCCTGGATCAGATGGTTG CCGGCAAGATCACCGGGCTCAAGCCGGAACAGGTCGAGATTCACACCGAATTCCTTGGCGGCGGGTTTGGTCGGCGGGCC AACCCGACCTCGGATTTTGTCGCCGAAGCGGTGCAAGTGGCCAAGGCTGCCGCGATGCCGGTGAAAACCGTGTGGTCGCG CGAAGACGATATTCGCGGTGGTTATTACCGCTCGATGTTCCTGCATCAGGCGAAGATCGGCCTCGGCGCCGACGGCCTGC CGCTGGCATGGCAGCATGTGCTGGTCGGGCAATCGATCATGGCCGGCACCATGCTCGAGAAAACCATGGTCAAGAACGGC GTCGACCAGACCTCGGTCGAGGGCGTTTCGGACAGCCCGTACATCAAGGGCCTGGCCCATCATCAGGTCGATCTGCACTC GCCGAGCACCGGGATCAACGTGCTGTGGCTACGCTCGGTGGGCCATAGCCACACCGCGTTTGTCATGGAGTCGCTGATCG ATGAAATGGCCACGGCGGCGGGCCAGGATCCGGTGGAGTACCGACGAACGCTGCTCAAGGAGCATGCCCGGCATCTCGGC GTGTTGAACCTGGCGGTGGAGAAGGCTAACTGGAAAGCCCCGCTGCCGGACGGCCATGCGCTGGGCGTGGCGGTGCACGA ATCGTTCGGCAGTTACGTGGCGCAGGTGGCCGAGGTGTCCCAGGACAATCTGGCGATCCGCGTGCATCGCGTGGTGTGCG CGGTGGACTGCGGAGTGGCGGTGAACCCGCAGAGCATCGCGGCGCAGATGGAGTCGTGTATCACCTTCGGCCTGGGCATG GCGCTGCACAGCAAACTGACCCTCAAGGACGGCCATGTCGTGCAGTCCAACTATCACGACTATCAGGTGTTGCGGCTCAA TGAAATGCCGCTGGTCGAGGTGCACATCGTGCCCAGCAGCGAGAAACCCGGCGGCATCGGCGAGGCCGGTGTGCCGCCCA CGGCGCCGGCGGTGGCCAACGCGGTGTTCGCCCTGACCGGGCAACGCCTGCGGGAACTGCCGCTGCAACTGTCGGGGGTG TGA
Upstream 100 bases:
>100_bases AGGCGCTCTCCGGCAATATCTGCCGCTGCGGCACGTATCCAAGAATCCGCGCGGCGGTCAAACGTGCTGCCGACATCGGC TGAACGAAGGGAGGTGGGTG
Downstream 100 bases:
>100_bases GATGAAACGACATCTGTTGTTGGGCACGGTGATTCTGCTTGGGCTGGGCGGTTACGCGTCGGATCTGTTTGCCGACGATC AGGAAGCCTTGAAAGCTTTC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MNSPVSRRGFLKGSAVLGGGLVVAFVVPGGNRFAMAAENEGKVFAPNAFLRIAADNSVTVLLGHSEMGQGIWTGLTMLIA EELDADWSKIRVEHSPASAADYGMPAFGGMQITGGSTSTWMEFDRYRLAGATARQMLIEAAAKRFNVAPSTIRTESGVVI AGDNRATYGELADAAGQLPVPDPKSITFKEAKDWKVIGKPTKRLDTPEKITGRAKFGMDVQFEGLMTAMVARAPTFGATV KSFEGADALAIPGVHKVVQVPTGVAVVAEHYWAAKLGRDALKVDWDLGPNADLSSEKLLASFRKLAATPGTSAAQAGDAK GNFGKAAKKIDVEYSVPYLAHAPMEPLNCTVKISADKCEIWTGTQFQTLDQMVAGKITGLKPEQVEIHTEFLGGGFGRRA NPTSDFVAEAVQVAKAAAMPVKTVWSREDDIRGGYYRSMFLHQAKIGLGADGLPLAWQHVLVGQSIMAGTMLEKTMVKNG VDQTSVEGVSDSPYIKGLAHHQVDLHSPSTGINVLWLRSVGHSHTAFVMESLIDEMATAAGQDPVEYRRTLLKEHARHLG VLNLAVEKANWKAPLPDGHALGVAVHESFGSYVAQVAEVSQDNLAIRVHRVVCAVDCGVAVNPQSIAAQMESCITFGLGM ALHSKLTLKDGHVVQSNYHDYQVLRLNEMPLVEVHIVPSSEKPGGIGEAGVPPTAPAVANAVFALTGQRLRELPLQLSGV
Sequences:
>Translated_720_residues MNSPVSRRGFLKGSAVLGGGLVVAFVVPGGNRFAMAAENEGKVFAPNAFLRIAADNSVTVLLGHSEMGQGIWTGLTMLIA EELDADWSKIRVEHSPASAADYGMPAFGGMQITGGSTSTWMEFDRYRLAGATARQMLIEAAAKRFNVAPSTIRTESGVVI AGDNRATYGELADAAGQLPVPDPKSITFKEAKDWKVIGKPTKRLDTPEKITGRAKFGMDVQFEGLMTAMVARAPTFGATV KSFEGADALAIPGVHKVVQVPTGVAVVAEHYWAAKLGRDALKVDWDLGPNADLSSEKLLASFRKLAATPGTSAAQAGDAK GNFGKAAKKIDVEYSVPYLAHAPMEPLNCTVKISADKCEIWTGTQFQTLDQMVAGKITGLKPEQVEIHTEFLGGGFGRRA NPTSDFVAEAVQVAKAAAMPVKTVWSREDDIRGGYYRSMFLHQAKIGLGADGLPLAWQHVLVGQSIMAGTMLEKTMVKNG VDQTSVEGVSDSPYIKGLAHHQVDLHSPSTGINVLWLRSVGHSHTAFVMESLIDEMATAAGQDPVEYRRTLLKEHARHLG VLNLAVEKANWKAPLPDGHALGVAVHESFGSYVAQVAEVSQDNLAIRVHRVVCAVDCGVAVNPQSIAAQMESCITFGLGM ALHSKLTLKDGHVVQSNYHDYQVLRLNEMPLVEVHIVPSSEKPGGIGEAGVPPTAPAVANAVFALTGQRLRELPLQLSGV >Mature_720_residues MNSPVSRRGFLKGSAVLGGGLVVAFVVPGGNRFAMAAENEGKVFAPNAFLRIAADNSVTVLLGHSEMGQGIWTGLTMLIA EELDADWSKIRVEHSPASAADYGMPAFGGMQITGGSTSTWMEFDRYRLAGATARQMLIEAAAKRFNVAPSTIRTESGVVI AGDNRATYGELADAAGQLPVPDPKSITFKEAKDWKVIGKPTKRLDTPEKITGRAKFGMDVQFEGLMTAMVARAPTFGATV KSFEGADALAIPGVHKVVQVPTGVAVVAEHYWAAKLGRDALKVDWDLGPNADLSSEKLLASFRKLAATPGTSAAQAGDAK GNFGKAAKKIDVEYSVPYLAHAPMEPLNCTVKISADKCEIWTGTQFQTLDQMVAGKITGLKPEQVEIHTEFLGGGFGRRA NPTSDFVAEAVQVAKAAAMPVKTVWSREDDIRGGYYRSMFLHQAKIGLGADGLPLAWQHVLVGQSIMAGTMLEKTMVKNG VDQTSVEGVSDSPYIKGLAHHQVDLHSPSTGINVLWLRSVGHSHTAFVMESLIDEMATAAGQDPVEYRRTLLKEHARHLG VLNLAVEKANWKAPLPDGHALGVAVHESFGSYVAQVAEVSQDNLAIRVHRVVCAVDCGVAVNPQSIAAQMESCITFGLGM ALHSKLTLKDGHVVQSNYHDYQVLRLNEMPLVEVHIVPSSEKPGGIGEAGVPPTAPAVANAVFALTGQRLRELPLQLSGV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=175, Percent_Identity=26.8571428571429, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 76732; Mature: 76732
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPVSRRGFLKGSAVLGGGLVVAFVVPGGNRFAMAAENEGKVFAPNAFLRIAADNSVTV CCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCEEE LLGHSEMGQGIWTGLTMLIAEELDADWSKIRVEHSPASAADYGMPAFGGMQITGGSTSTW EECCCHHCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCHHCCCCCCCCEEEECCCCCHH MEFDRYRLAGATARQMLIEAAAKRFNVAPSTIRTESGVVIAGDNRATYGELADAAGQLPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCHHHHHHHCCCCCC PDPKSITFKEAKDWKVIGKPTKRLDTPEKITGRAKFGMDVQFEGLMTAMVARAPTFGATV CCCCCEEECCCCCCEEECCCHHHCCCCHHHCCCEECCCCEEHHHHHHHHHHCCCCCCCHH KSFEGADALAIPGVHKVVQVPTGVAVVAEHYWAAKLGRDALKVDWDLGPNADLSSEKLLA HCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH SFRKLAATPGTSAAQAGDAKGNFGKAAKKIDVEYSVPYLAHAPMEPLNCTVKISADKCEI HHHHHHCCCCCCHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEE WTGTQFQTLDQMVAGKITGLKPEQVEIHTEFLGGGFGRRANPTSDFVAEAVQVAKAAAMP ECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC VKTVWSREDDIRGGYYRSMFLHQAKIGLGADGLPLAWQHVLVGQSIMAGTMLEKTMVKNG HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC VDQTSVEGVSDSPYIKGLAHHQVDLHSPSTGINVLWLRSVGHSHTAFVMESLIDEMATAA CCCCCCCCCCCCCHHCCHHHCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GQDPVEYRRTLLKEHARHLGVLNLAVEKANWKAPLPDGHALGVAVHESFGSYVAQVAEVS CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCC QDNLAIRVHRVVCAVDCGVAVNPQSIAAQMESCITFGLGMALHSKLTLKDGHVVQSNYHD CCCEEEEEEEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCC YQVLRLNEMPLVEVHIVPSSEKPGGIGEAGVPPTAPAVANAVFALTGQRLRELPLQLSGV EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure MNSPVSRRGFLKGSAVLGGGLVVAFVVPGGNRFAMAAENEGKVFAPNAFLRIAADNSVTV CCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEEECCCCCEECCCCEEEEEECCCEEE LLGHSEMGQGIWTGLTMLIAEELDADWSKIRVEHSPASAADYGMPAFGGMQITGGSTSTW EECCCHHCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCHHCCCCCCCCEEEECCCCCHH MEFDRYRLAGATARQMLIEAAAKRFNVAPSTIRTESGVVIAGDNRATYGELADAAGQLPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEECCCCCCHHHHHHHCCCCCC PDPKSITFKEAKDWKVIGKPTKRLDTPEKITGRAKFGMDVQFEGLMTAMVARAPTFGATV CCCCCEEECCCCCCEEECCCHHHCCCCHHHCCCEECCCCEEHHHHHHHHHHCCCCCCCHH KSFEGADALAIPGVHKVVQVPTGVAVVAEHYWAAKLGRDALKVDWDLGPNADLSSEKLLA HCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH SFRKLAATPGTSAAQAGDAKGNFGKAAKKIDVEYSVPYLAHAPMEPLNCTVKISADKCEI HHHHHHCCCCCCHHCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEE WTGTQFQTLDQMVAGKITGLKPEQVEIHTEFLGGGFGRRANPTSDFVAEAVQVAKAAAMP ECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC VKTVWSREDDIRGGYYRSMFLHQAKIGLGADGLPLAWQHVLVGQSIMAGTMLEKTMVKNG HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC VDQTSVEGVSDSPYIKGLAHHQVDLHSPSTGINVLWLRSVGHSHTAFVMESLIDEMATAA CCCCCCCCCCCCCHHCCHHHCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC GQDPVEYRRTLLKEHARHLGVLNLAVEKANWKAPLPDGHALGVAVHESFGSYVAQVAEVS CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCC QDNLAIRVHRVVCAVDCGVAVNPQSIAAQMESCITFGLGMALHSKLTLKDGHVVQSNYHD CCCEEEEEEEEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCC YQVLRLNEMPLVEVHIVPSSEKPGGIGEAGVPPTAPAVANAVFALTGQRLRELPLQLSGV EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]