| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is iorA [H]
Identifier: 77458400
GI number: 77458400
Start: 2454106
End: 2454561
Strand: Direct
Name: iorA [H]
Synonym: Pfl01_2173
Alternate gene names: 77458400
Gene position: 2454106-2454561 (Clockwise)
Preceding gene: 77458398
Following gene: 77458401
Centisome position: 38.12
GC content: 63.82
Gene sequence:
>456_bases ATGCTGACCTTGAATATCAATGGCAAGGATCAGGAGCTCGATGTCCCTGCGGACATGCCGTTGCTCTGGGTCCTGCGCGA TGTCGCGCACCTGACCGGTACCAAATTCGGTTGCGGCATGGCCCAGTGCGGTGCCTGCACCGTGCACGTCGATGGCGCGC CGTTGCGCTCGTGTATCACGCCGGCCACGGCCGTCGCCCATGGCCAGAAGATCCTCACCATCGAAGGCCTGTCGAGCGAC GGCTCGCACCCGGTGCAGCAGGCCTGGGCCGAACTGGACGTGGTGCAATGCGGTTACTGCCAGTCCGGGCAGATCATGTC CGCCGCCGCGTTGCTGGCGAAAATCCCCAAACCCACCGACAGCGATATCGATCAGGCGCTCTCCGGCAATATCTGCCGCT GCGGCACGTATCCAAGAATCCGCGCGGCGGTCAAACGTGCTGCCGACATCGGCTGA
Upstream 100 bases:
>100_bases GCAAAATGCGCTTAGCTGAAAGGGATAAGCCGAGGCGCGCACCGCCAACGATGGCCGTAGCAGCGCCCTTCAGAACACTG TGAGTCTGAGGAAGTCCCCG
Downstream 100 bases:
>100_bases ACGAAGGGAGGTGGGTGATGAATAGTCCAGTATCCCGTCGCGGATTTCTCAAGGGCAGCGCCGTGCTGGGCGGTGGTCTG GTGGTGGCGTTCGTGGTGCC
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLTLNINGKDQELDVPADMPLLWVLRDVAHLTGTKFGCGMAQCGACTVHVDGAPLRSCITPATAVAHGQKILTIEGLSSD GSHPVQQAWAELDVVQCGYCQSGQIMSAAALLAKIPKPTDSDIDQALSGNICRCGTYPRIRAAVKRAADIG
Sequences:
>Translated_151_residues MLTLNINGKDQELDVPADMPLLWVLRDVAHLTGTKFGCGMAQCGACTVHVDGAPLRSCITPATAVAHGQKILTIEGLSSD GSHPVQQAWAELDVVQCGYCQSGQIMSAAALLAKIPKPTDSDIDQALSGNICRCGTYPRIRAAVKRAADIG >Mature_151_residues MLTLNINGKDQELDVPADMPLLWVLRDVAHLTGTKFGCGMAQCGACTVHVDGAPLRSCITPATAVAHGQKILTIEGLSSD GSHPVQQAWAELDVVQCGYCQSGQIMSAAALLAKIPKPTDSDIDQALSGNICRCGTYPRIRAAVKRAADIG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=94, Percent_Identity=38.2978723404255, Blast_Score=71, Evalue=5e-13, Organism=Homo sapiens, GI91823271, Length=83, Percent_Identity=38.5542168674699, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=47.5609756097561, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI1789232, Length=144, Percent_Identity=44.4444444444444, Blast_Score=94, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17540638, Length=161, Percent_Identity=40.3726708074534, Blast_Score=108, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17539860, Length=153, Percent_Identity=37.9084967320261, Blast_Score=101, Evalue=2e-22, Organism=Caenorhabditis elegans, GI32566215, Length=153, Percent_Identity=37.9084967320261, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17737937, Length=158, Percent_Identity=36.7088607594937, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=36.6459627329193, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI24647201, Length=156, Percent_Identity=35.2564102564103, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=33.7423312883436, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=33.7423312883436, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647199, Length=142, Percent_Identity=35.9154929577465, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 15857; Mature: 15857
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLNINGKDQELDVPADMPLLWVLRDVAHLTGTKFGCGMAQCGACTVHVDGAPLRSCIT CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHC PATAVAHGQKILTIEGLSSDGSHPVQQAWAELDVVQCGYCQSGQIMSAAALLAKIPKPTD HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHCCCCCC SDIDQALSGNICRCGTYPRIRAAVKRAADIG CCHHHHHCCCEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLTLNINGKDQELDVPADMPLLWVLRDVAHLTGTKFGCGMAQCGACTVHVDGAPLRSCIT CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHC PATAVAHGQKILTIEGLSSDGSHPVQQAWAELDVVQCGYCQSGQIMSAAALLAKIPKPTD HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHCCCCCC SDIDQALSGNICRCGTYPRIRAAVKRAADIG CCHHHHHCCCEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]