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The map label for this gene is yagT [H]

Identifier: 77458336

GI number: 77458336

Start: 2397052

End: 2397693

Strand: Reverse

Name: yagT [H]

Synonym: Pfl01_2109

Alternate gene names: 77458336

Gene position: 2397693-2397052 (Counterclockwise)

Preceding gene: 77458339

Following gene: 77458335

Centisome position: 37.24

GC content: 63.86

Gene sequence:

>642_bases
ATGAACGACCATCCGCCGTTGGCGATTTCCCGACGCCGTTTCCTGATTCTCGGGGCCGTGACCGCGACTGCGTTCGCGAT
GCCCCCTTTCATCAACCTCAAGGCCTACGCGGCCAGCCTGGAGCAACCGGCCATGGCCAAAGTAACCATCGAAGTCAACG
GCAAGCCGCAGACGCTGGAGATCGACACCCGCACCACCCTGCTCGACGCCCTGCGCGAACACCTGCAGCTGACTGGCAGC
AAAAAGGGCTGCGACCACGGCCAGTGCGGCGCCTGCACGGTGATCGTCGATGGCCGGCGAATCAATTCCTGCCTGACCCT
GGCGGTGATGCAGGACGGCGCCAAAGTCACCACCATCGAAGGCCTCGGCATGCCGGACCACCTGCATCCGATGCAGGCGG
CGTTCATCAAGCATGACGGTTACCAGTGCGGCTACTGCACGCCGGGACAGATCTGTTCGGCGGTCGCCGTGCTCCAGGAA
ATCCGCGACGGCATCCCCAGCCACGCCAGCGCCAGCCTCACCGAAGCACCGCAACTGATCGCCAGCGAATTGCAGGAACG
CATGAGCGGCAACATCTGCCGGTGCGGCGCCTACTCGAACATCATCGAAGCCATCAGCGAAGTCGCGGAGGTGCCAGCAT
GA

Upstream 100 bases:

>100_bases
CCCTGCGGTCACTCCTAGAACAGACCAAGACTGGCTACCACGCCGGCGTGCCTTGGCGGGTCATTTGCAACCTGCCGACC
TGATCAGAGGAAGCCCAGCC

Downstream 100 bases:

>100_bases
GAGCGTTCAATTACAGCCGCGCCGACTCCCCTGCCGCAGCTGCTGCCCAAGCCGCGCAAATCGAAGGCGCACGTTTCATT
GCCGGCGGCACCAATCTGCT

Product: putative xanthine dehydrogenase iron-sulfur-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNDHPPLAISRRRFLILGAVTATAFAMPPFINLKAYAASLEQPAMAKVTIEVNGKPQTLEIDTRTTLLDALREHLQLTGS
KKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGAKVTTIEGLGMPDHLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLQE
IRDGIPSHASASLTEAPQLIASELQERMSGNICRCGAYSNIIEAISEVAEVPA

Sequences:

>Translated_213_residues
MNDHPPLAISRRRFLILGAVTATAFAMPPFINLKAYAASLEQPAMAKVTIEVNGKPQTLEIDTRTTLLDALREHLQLTGS
KKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGAKVTTIEGLGMPDHLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLQE
IRDGIPSHASASLTEAPQLIASELQERMSGNICRCGAYSNIIEAISEVAEVPA
>Mature_213_residues
MNDHPPLAISRRRFLILGAVTATAFAMPPFINLKAYAASLEQPAMAKVTIEVNGKPQTLEIDTRTTLLDALREHLQLTGS
KKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGAKVTTIEGLGMPDHLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLQE
IRDGIPSHASASLTEAPQLIASELQERMSGNICRCGAYSNIIEAISEVAEVPA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=176, Percent_Identity=33.5227272727273, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI71773480, Length=171, Percent_Identity=35.672514619883, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1786480, Length=209, Percent_Identity=62.200956937799, Blast_Score=267, Evalue=5e-73,
Organism=Escherichia coli, GI1789232, Length=160, Percent_Identity=38.75, Blast_Score=101, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17540638, Length=174, Percent_Identity=35.0574712643678, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32566215, Length=172, Percent_Identity=30.8139534883721, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17539860, Length=169, Percent_Identity=31.9526627218935, Blast_Score=87, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17737937, Length=165, Percent_Identity=40, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24647197, Length=185, Percent_Identity=34.5945945945946, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24647195, Length=185, Percent_Identity=34.5945945945946, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24647199, Length=168, Percent_Identity=32.1428571428571, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24647201, Length=169, Percent_Identity=31.3609467455621, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24647193, Length=183, Percent_Identity=30.6010928961749, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 22756; Mature: 22756

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDHPPLAISRRRFLILGAVTATAFAMPPFINLKAYAASLEQPAMAKVTIEVNGKPQTLE
CCCCCCCEECCCEEEEEEHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEE
IDTRTTLLDALREHLQLTGSKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGAKVTTIE
ECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHEEEEECCCCCEEEEEE
GLGMPDHLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLQEIRDGIPSHASASLTEAPQLI
CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASELQERMSGNICRCGAYSNIIEAISEVAEVPA
HHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDHPPLAISRRRFLILGAVTATAFAMPPFINLKAYAASLEQPAMAKVTIEVNGKPQTLE
CCCCCCCEECCCEEEEEEHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEE
IDTRTTLLDALREHLQLTGSKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGAKVTTIE
ECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHEEEEECCCCCEEEEEE
GLGMPDHLHPMQAAFIKHDGYQCGYCTPGQICSAVAVLQEIRDGIPSHASASLTEAPQLI
CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ASELQERMSGNICRCGAYSNIIEAISEVAEVPA
HHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]