Click here to switch to the map view.

The map label for this gene is yagS [H]

Identifier: 77458335

GI number: 77458335

Start: 2396099

End: 2397055

Strand: Reverse

Name: yagS [H]

Synonym: Pfl01_2108

Alternate gene names: 77458335

Gene position: 2397055-2396099 (Counterclockwise)

Preceding gene: 77458336

Following gene: 77458334

Centisome position: 37.23

GC content: 64.05

Gene sequence:

>957_bases
ATGAGAGCGTTCAATTACAGCCGCGCCGACTCCCCTGCCGCAGCTGCTGCCCAAGCCGCGCAAATCGAAGGCGCACGTTT
CATTGCCGGCGGCACCAATCTGCTGGACTTGATGAAACTCGACATCGAAACGCCCCAGCAGCTGATAGACGTCAATCACC
TGGGGCTCGACCGGATCGAAGCCACCGACGACGGCGGCTTGCGCATCGGCGCACTGGTGCGCAATACCGATCTGGCCGCC
GACAGCCGCGTCCGGAAAGACTACGCGCTGCTGTCCCGCGCCTTGCTCGCCGGCGCATCGGGCCAGTTGCGCAACATGGC
GACCACCGCCGGCAATCTGCTCCAGCGCACGCGCTGCCCGTATTTCTACGACACCAATCAGGCCTGCAATAAACGCAATC
CCGGCAGTGGTTGCGCGGCGATTGGCGGGGTCAGTCGACAACTCGGCATCATCGGTGTCAGCGGCGCCTGCATCGCGACC
CATCCGAGTGACATGGCGATTGCGATGCGTGCGCTGGATGCTCAGGTCGAAACGATCAAGGCTGATGGCAGCACTCGACG
CATCGCCATCGCGGACTTCCATCAATTGCCCGGCACCACCCCGAATGTCGAAACCAGCCTGACGCCGGGCGAGCTGATTA
CCGCCGTCACCCTGCCCGCGCCAGTGGGCGGCACCCATGTCTATCACAAGGTGCGCGACCGCTCGTCTTACGCCTTCGCT
CTAGTGTCCGTCGGCCTGATCCTGCTGAAGGATGGCAGCGGTCGCGTTGCCATCGGCGGTATCGCGCCGAAACCCTGGCG
GGTCGAAGCGGCGGAAGCGTTGCTGCCGCAAGGCGCAAAAGCCGTCAGCGCGCGCCTGCTCGACGGCGCCACGCCCACCG
CTGATAACCAGTTCAAAGTGAAATTGGTCGAGCGCACGATTGCCTCGGTGCTGGCCCAAGCGAGGGACGAAGCATGA

Upstream 100 bases:

>100_bases
TCGCCAGCGAATTGCAGGAACGCATGAGCGGCAACATCTGCCGGTGCGGCGCCTACTCGAACATCATCGAAGCCATCAGC
GAAGTCGCGGAGGTGCCAGC

Downstream 100 bases:

>100_bases
AATTCGACACGCCCGCCACGACCAACCCGATTGATCAGCTGAACGTCATCGGCAAACCCACCGACCGCATCGAAGGCCCG
CTGAAGACCAGCGGCCAGGC

Product: molybdopterin dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRAFNYSRADSPAAAAAQAAQIEGARFIAGGTNLLDLMKLDIETPQQLIDVNHLGLDRIEATDDGGLRIGALVRNTDLAA
DSRVRKDYALLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNQACNKRNPGSGCAAIGGVSRQLGIIGVSGACIAT
HPSDMAIAMRALDAQVETIKADGSTRRIAIADFHQLPGTTPNVETSLTPGELITAVTLPAPVGGTHVYHKVRDRSSYAFA
LVSVGLILLKDGSGRVAIGGIAPKPWRVEAAEALLPQGAKAVSARLLDGATPTADNQFKVKLVERTIASVLAQARDEA

Sequences:

>Translated_318_residues
MRAFNYSRADSPAAAAAQAAQIEGARFIAGGTNLLDLMKLDIETPQQLIDVNHLGLDRIEATDDGGLRIGALVRNTDLAA
DSRVRKDYALLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNQACNKRNPGSGCAAIGGVSRQLGIIGVSGACIAT
HPSDMAIAMRALDAQVETIKADGSTRRIAIADFHQLPGTTPNVETSLTPGELITAVTLPAPVGGTHVYHKVRDRSSYAFA
LVSVGLILLKDGSGRVAIGGIAPKPWRVEAAEALLPQGAKAVSARLLDGATPTADNQFKVKLVERTIASVLAQARDEA
>Mature_318_residues
MRAFNYSRADSPAAAAAQAAQIEGARFIAGGTNLLDLMKLDIETPQQLIDVNHLGLDRIEATDDGGLRIGALVRNTDLAA
DSRVRKDYALLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNQACNKRNPGSGCAAIGGVSRQLGIIGVSGACIAT
HPSDMAIAMRALDAQVETIKADGSTRRIAIADFHQLPGTTPNVETSLTPGELITAVTLPAPVGGTHVYHKVRDRSSYAFA
LVSVGLILLKDGSGRVAIGGIAPKPWRVEAAEALLPQGAKAVSARLLDGATPTADNQFKVKLVERTIASVLAQARDEA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=318, Percent_Identity=71.3836477987421, Blast_Score=466, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 33375; Mature: 33375

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFNYSRADSPAAAAAQAAQIEGARFIAGGTNLLDLMKLDIETPQQLIDVNHLGLDRIE
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCEE
ATDDGGLRIGALVRNTDLAADSRVRKDYALLSRALLAGASGQLRNMATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
YFYDTNQACNKRNPGSGCAAIGGVSRQLGIIGVSGACIATHPSDMAIAMRALDAQVETIK
EEECCCHHHCCCCCCCCHHHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHEEEE
ADGSTRRIAIADFHQLPGTTPNVETSLTPGELITAVTLPAPVGGTHVYHKVRDRSSYAFA
CCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHH
LVSVGLILLKDGSGRVAIGGIAPKPWRVEAAEALLPQGAKAVSARLLDGATPTADNQFKV
HHHCCEEEEECCCCEEEECCCCCCCCEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEE
KLVERTIASVLAQARDEA
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAFNYSRADSPAAAAAQAAQIEGARFIAGGTNLLDLMKLDIETPQQLIDVNHLGLDRIE
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCEE
ATDDGGLRIGALVRNTDLAADSRVRKDYALLSRALLAGASGQLRNMATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
YFYDTNQACNKRNPGSGCAAIGGVSRQLGIIGVSGACIATHPSDMAIAMRALDAQVETIK
EEECCCHHHCCCCCCCCHHHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHEEEE
ADGSTRRIAIADFHQLPGTTPNVETSLTPGELITAVTLPAPVGGTHVYHKVRDRSSYAFA
CCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHH
LVSVGLILLKDGSGRVAIGGIAPKPWRVEAAEALLPQGAKAVSARLLDGATPTADNQFKV
HHHCCEEEEECCCCEEEECCCCCCCCEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEE
KLVERTIASVLAQARDEA
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]