| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ubiE [C]
Identifier: 77458319
GI number: 77458319
Start: 2377230
End: 2378042
Strand: Direct
Name: ubiE [C]
Synonym: Pfl01_2092
Alternate gene names: 77458319
Gene position: 2377230-2378042 (Clockwise)
Preceding gene: 77458318
Following gene: 77458321
Centisome position: 36.92
GC content: 65.31
Gene sequence:
>813_bases ATGAGTACCCCCATTGATCTCACTGCCCTGAAGGAACGCCAGAAAGTCGCCTGGGCCAGTGGCGACTACGCCGTGATCGG CACCACCTTGCAGATCGTCGGCGAAACCCTCGCCGAAGCCTGCGACCTGCGCTGCGATGAAGAAGTGCTGGACGTTGCTG CCGGTAACGGCAATGCCACGCTGGCGGCGGCGCGCCGGGGTTGTCTGGTGACGTCCACCGACTATGTCGCGGCGCTGCTG GAACGCGGCCAGGACCGGGCGCGCGCCGAGCATCTGGACGTGACCTTTCAGGTCGCCGATGCCGAAGCGCTGCCGTTTGC CGACTCCAGTTTCGACGCGGTGCTGTCGACCTTCGGCGTGATGTTCGCCCCGGATCAGGCGAAGGCGGCCAAGGAGCTGG CGCGGGTCTGCCGCCGTGGTGGCCGGATCGGCCTGGCCAACTGGACACCGGAAGGTTTCGTCGGCCAGATGTTCAAGACC CTCGGGCGCTATCTGCCACCGCCACCCGGTTCGCAACCGCCCTCGAACTGGGGCGCGGAAGCCTGGCTGCATTCGCATTT CGACGATCGCCAGTTTCAGGTGCAGGTGACTCGCCGCCACTTCAACTTTCGCTACCGCTCGGCGGCGCATTTCATTGATG TGTTTCGCCACTGGTACGGCCCGGTACACAAGGCGTTCGCGGCGTTGCCGCCGGAGAGCGGGCAGGCGCTGGAGACGGAT CTGACGCTACTGATCGACGGGCTGAACCGGGCGGGGGCGGAATCGATGGTGGTGCCGAGCGAGTATCTGGAGGTGGTGAT AACCAAACGCTGA
Upstream 100 bases:
>100_bases GCCAAGCGTGGGGGATTTCCGGCCAACAGCGTGTCCCGGGTGACGAGCATCATCGACCCGACCACCGCCGATTGACCCCT CTGCCGCGGAGCACCCATTC
Downstream 100 bases:
>100_bases GCGTCATGCAAAACAACTGTGGGAGCGAGCTTGCTCGCTCCCACAGGGATTGCGACAGGGCTTCTATTTCAGATGCGCAC CGTCAAACCACTCCAACGCC
Product: UbiE/COQ5 methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSTPIDLTALKERQKVAWASGDYAVIGTTLQIVGETLAEACDLRCDEEVLDVAAGNGNATLAAARRGCLVTSTDYVAALL ERGQDRARAEHLDVTFQVADAEALPFADSSFDAVLSTFGVMFAPDQAKAAKELARVCRRGGRIGLANWTPEGFVGQMFKT LGRYLPPPPGSQPPSNWGAEAWLHSHFDDRQFQVQVTRRHFNFRYRSAAHFIDVFRHWYGPVHKAFAALPPESGQALETD LTLLIDGLNRAGAESMVVPSEYLEVVITKR
Sequences:
>Translated_270_residues MSTPIDLTALKERQKVAWASGDYAVIGTTLQIVGETLAEACDLRCDEEVLDVAAGNGNATLAAARRGCLVTSTDYVAALL ERGQDRARAEHLDVTFQVADAEALPFADSSFDAVLSTFGVMFAPDQAKAAKELARVCRRGGRIGLANWTPEGFVGQMFKT LGRYLPPPPGSQPPSNWGAEAWLHSHFDDRQFQVQVTRRHFNFRYRSAAHFIDVFRHWYGPVHKAFAALPPESGQALETD LTLLIDGLNRAGAESMVVPSEYLEVVITKR >Mature_269_residues STPIDLTALKERQKVAWASGDYAVIGTTLQIVGETLAEACDLRCDEEVLDVAAGNGNATLAAARRGCLVTSTDYVAALLE RGQDRARAEHLDVTFQVADAEALPFADSSFDAVLSTFGVMFAPDQAKAAKELARVCRRGGRIGLANWTPEGFVGQMFKTL GRYLPPPPGSQPPSNWGAEAWLHSHFDDRQFQVQVTRRHFNFRYRSAAHFIDVFRHWYGPVHKAFAALPPESGQALETDL TLLIDGLNRAGAESMVVPSEYLEVVITKR
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1403c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 29607; Mature: 29475
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPIDLTALKERQKVAWASGDYAVIGTTLQIVGETLAEACDLRCDEEVLDVAAGNGNAT CCCCCCHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEE LAAARRGCLVTSTDYVAALLERGQDRARAEHLDVTFQVADAEALPFADSSFDAVLSTFGV EHHHHCCCEEECHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHC MFAPDQAKAAKELARVCRRGGRIGLANWTPEGFVGQMFKTLGRYLPPPPGSQPPSNWGAE EECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH AWLHSHFDDRQFQVQVTRRHFNFRYRSAAHFIDVFRHWYGPVHKAFAALPPESGQALETD HHHHCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LTLLIDGLNRAGAESMVVPSEYLEVVITKR HHHHHHCCCCCCCCCCCCCHHHHHEEECCC >Mature Secondary Structure STPIDLTALKERQKVAWASGDYAVIGTTLQIVGETLAEACDLRCDEEVLDVAAGNGNAT CCCCCHHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEE LAAARRGCLVTSTDYVAALLERGQDRARAEHLDVTFQVADAEALPFADSSFDAVLSTFGV EHHHHCCCEEECHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHC MFAPDQAKAAKELARVCRRGGRIGLANWTPEGFVGQMFKTLGRYLPPPPGSQPPSNWGAE EECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH AWLHSHFDDRQFQVQVTRRHFNFRYRSAAHFIDVFRHWYGPVHKAFAALPPESGQALETD HHHHCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LTLLIDGLNRAGAESMVVPSEYLEVVITKR HHHHHHCCCCCCCCCCCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]