| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yebE [C]
Identifier: 77458321
GI number: 77458321
Start: 2379089
End: 2379814
Strand: Direct
Name: yebE [C]
Synonym: Pfl01_2094
Alternate gene names: 77458321
Gene position: 2379089-2379814 (Clockwise)
Preceding gene: 77458319
Following gene: 77458322
Centisome position: 36.95
GC content: 66.8
Gene sequence:
>726_bases ATGAACACCAGCGATCTGCTCGAACAACTGCTGCGAGGCCAGGCCTCGGCGGGACAACCAGGTGGCGCGTCGGCCGGCGG GGGAGCGGGTGGGCTTGGCGGGTTGCTCGGCGGTCTGCTGGGCGGCGGCAGTGGCGGCGGTTCTGCTGCCGGAGGGCTGG GTGGCCTGGGCGGGTTGCTTGGCGGATTGCTCGGCGGTGGCGGGGCGCTGGGCGGCGGGACGCAGCGTCGTTCCGGCGGC ACCAATTACGCAGCACTGGCCTCGCTGGGCATGATGGCCTTCCAGGCGTATCAGGCCTGGCAACGCAGCCAGGCTTCTGC TGCGCCGCAGCAAACCCCGCAAACCGCGGATCTGCTGTCGGGCCCGCAAGTCGAAGAACACAGCCACGCCGTCCTGCGTG CGTTGATCGCGGCGGCCAAGGCTGACGGGCGGATCGACGAGTCGGAAAAACACCTCATCAGCAGTGAAATCGGCAGGCAC ACCGATGACCCGAACCTGCAGCAATGGCTCGACGACGAGGTCGCCAAACCACTGGATCCCACCGAAGTGGCGCAGGCGGC GCAGAACGATCCAGCCATGGCCGCCGAGATGTACCTGGCCAGCGTGATGCTGGTCGACGATCAGCAGGACGCCGAGCGCA ATTATCTGGATGAACTGGCAGCGGCGTTGCAGATTGACCCGGAGTTGCAGGTTCACCTCGAACAGCAAGCCAAAGGCACG GCCTGA
Upstream 100 bases:
>100_bases ACTCGCCCATGGCCACGTCAGCCCAACGGTGCTGGCGCAACGCATCAGGAGGGCTATCGTTGCCTGACGCAGTCATACCC CTTTGCCTGAGGACGACGTC
Downstream 100 bases:
>100_bases CCCTCTCATCCCACAGCCTTCGACCGCTCTGTTCAAGCAAGGAGCGAGCCGAAGGCTCCGTCCGTCAGGGCAATTTTCAA GCCGATTGAATTTTTGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MNTSDLLEQLLRGQASAGQPGGASAGGGAGGLGGLLGGLLGGGSGGGSAAGGLGGLGGLLGGLLGGGGALGGGTQRRSGG TNYAALASLGMMAFQAYQAWQRSQASAAPQQTPQTADLLSGPQVEEHSHAVLRALIAAAKADGRIDESEKHLISSEIGRH TDDPNLQQWLDDEVAKPLDPTEVAQAAQNDPAMAAEMYLASVMLVDDQQDAERNYLDELAAALQIDPELQVHLEQQAKGT A
Sequences:
>Translated_241_residues MNTSDLLEQLLRGQASAGQPGGASAGGGAGGLGGLLGGLLGGGSGGGSAAGGLGGLGGLLGGLLGGGGALGGGTQRRSGG TNYAALASLGMMAFQAYQAWQRSQASAAPQQTPQTADLLSGPQVEEHSHAVLRALIAAAKADGRIDESEKHLISSEIGRH TDDPNLQQWLDDEVAKPLDPTEVAQAAQNDPAMAAEMYLASVMLVDDQQDAERNYLDELAAALQIDPELQVHLEQQAKGT A >Mature_241_residues MNTSDLLEQLLRGQASAGQPGGASAGGGAGGLGGLLGGLLGGGSGGGSAAGGLGGLGGLLGGLLGGGGALGGGTQRRSGG TNYAALASLGMMAFQAYQAWQRSQASAAPQQTPQTADLLSGPQVEEHSHAVLRALIAAAKADGRIDESEKHLISSEIGRH TDDPNLQQWLDDEVAKPLDPTEVAQAAQNDPAMAAEMYLASVMLVDDQQDAERNYLDELAAALQIDPELQVHLEQQAKGT A
Specific function: Unknown
COG id: COG2979
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24243; Mature: 24243
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSDLLEQLLRGQASAGQPGGASAGGGAGGLGGLLGGLLGGGSGGGSAAGGLGGLGGLL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH GGLLGGGGALGGGTQRRSGGTNYAALASLGMMAFQAYQAWQRSQASAAPQQTPQTADLLS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC GPQVEEHSHAVLRALIAAAKADGRIDESEKHLISSEIGRHTDDPNLQQWLDDEVAKPLDP CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCH TEVAQAAQNDPAMAAEMYLASVMLVDDQQDAERNYLDELAAALQIDPELQVHLEQQAKGT HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC A C >Mature Secondary Structure MNTSDLLEQLLRGQASAGQPGGASAGGGAGGLGGLLGGLLGGGSGGGSAAGGLGGLGGLL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH GGLLGGGGALGGGTQRRSGGTNYAALASLGMMAFQAYQAWQRSQASAAPQQTPQTADLLS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC GPQVEEHSHAVLRALIAAAKADGRIDESEKHLISSEIGRHTDDPNLQQWLDDEVAKPLDP CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCH TEVAQAAQNDPAMAAEMYLASVMLVDDQQDAERNYLDELAAALQIDPELQVHLEQQAKGT HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA