| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458290
Identifier: 77458290
GI number: 77458290
Start: 2350194
End: 2350628
Strand: Direct
Name: 77458290
Synonym: Pfl01_2063
Alternate gene names: NA
Gene position: 2350194-2350628 (Clockwise)
Preceding gene: 77458288
Following gene: 77458291
Centisome position: 36.5
GC content: 59.31
Gene sequence:
>435_bases ATGCCCAGCCTGGTTCGCGAAATTCCTGCAGCGCCTTCGGCCATTGCCCTGATGCATTTCAGCAACCGTCTGACCTTTGA AACCGATTGTTCCGACGTCTTCAGCAGCCAGCAGGCTGGTGAGATCGATTTTGTGCTGGTCGATGTGCGCGGGCCGCTGG CCTTCGAGCGTGGTCATGTGCCGGGAGCGATCAATATTCCGGGGCGTCTGTTGACGGCAGAAGGGCTGGCGAACTACCCG AAAAACACACTGTTCGTGGTTTATTGCGCCGGTCCCCACTGCAATGGCGCCAACAAGGCCGCGGTGAAGCTGGCGGCGTT GGGTTATCCGGTCAAAGAGATGATCGGCGGGGTGACCGGTTGGCTGGATGAAGGCTTTCAGTTGAGCGTTACGGCACCGC GAGTCGCCACTGCCCCGATCGCTTGCGATTGTTGA
Upstream 100 bases:
>100_bases TTGGCGGAAAATTCCCGGTGAGTGTCTTGTGCGCCACTGTAGCGGCAAGCGACGGCCCGATAAAGTCTGTTCATCCCCAC CGACAAAGGAGTGATTCAAC
Downstream 100 bases:
>100_bases TAGCCAGAGAGTTGCCGCTTCGGCGGCACTTTTGTCGGCTTTTTCCTACAACCCGCGCACCGCTCTGACGCACACTTTTC CCAGGTGATGGCACTCGCCG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Sulfurtransferase; Transcriptional Regulator AraC Family; Sulfurtransferase; Rhodanese Protein; Rhodanese Sulfurtransferase; Rhodanese Domain Sulfurtransferase
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPSLVREIPAAPSAIALMHFSNRLTFETDCSDVFSSQQAGEIDFVLVDVRGPLAFERGHVPGAINIPGRLLTAEGLANYP KNTLFVVYCAGPHCNGANKAAVKLAALGYPVKEMIGGVTGWLDEGFQLSVTAPRVATAPIACDC
Sequences:
>Translated_144_residues MPSLVREIPAAPSAIALMHFSNRLTFETDCSDVFSSQQAGEIDFVLVDVRGPLAFERGHVPGAINIPGRLLTAEGLANYP KNTLFVVYCAGPHCNGANKAAVKLAALGYPVKEMIGGVTGWLDEGFQLSVTAPRVATAPIACDC >Mature_143_residues PSLVREIPAAPSAIALMHFSNRLTFETDCSDVFSSQQAGEIDFVLVDVRGPLAFERGHVPGAINIPGRLLTAEGLANYPK NTLFVVYCAGPHCNGANKAAVKLAALGYPVKEMIGGVTGWLDEGFQLSVTAPRVATAPIACDC
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15188; Mature: 15056
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLVREIPAAPSAIALMHFSNRLTFETDCSDVFSSQQAGEIDFVLVDVRGPLAFERGHV CCCHHHHCCCCCCEEEEEEECCCEEEECCHHHHHCCCCCCCEEEEEEECCCCEEEECCCC PGAINIPGRLLTAEGLANYPKNTLFVVYCAGPHCNGANKAAVKLAALGYPVKEMIGGVTG CEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHEEEEEECCCCHHHHHCCHHH WLDEGFQLSVTAPRVATAPIACDC HCCCCEEEEEECCCEEECCEEECC >Mature Secondary Structure PSLVREIPAAPSAIALMHFSNRLTFETDCSDVFSSQQAGEIDFVLVDVRGPLAFERGHV CCHHHHCCCCCCEEEEEEECCCEEEECCHHHHHCCCCCCCEEEEEEECCCCEEEECCCC PGAINIPGRLLTAEGLANYPKNTLFVVYCAGPHCNGANKAAVKLAALGYPVKEMIGGVTG CEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHEEEEEECCCCHHHHHCCHHH WLDEGFQLSVTAPRVATAPIACDC HCCCCEEEEEECCCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA