| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458275
Identifier: 77458275
GI number: 77458275
Start: 2334269
End: 2335723
Strand: Reverse
Name: 77458275
Synonym: Pfl01_2048
Alternate gene names: NA
Gene position: 2335723-2334269 (Counterclockwise)
Preceding gene: 77458279
Following gene: 77458274
Centisome position: 36.28
GC content: 59.18
Gene sequence:
>1455_bases ATGCAGACCTACCAAGTGTTGATTATCGGCAGCGGTTTTGGCGGCCAGTGCGCGGCGGTCAACCTGCTCAAGGCCGGTAT CGACGACTTTCGCTTGCTGGAGCGCCGGGACTTTTTCGGTGGCACCTGGTGCCAGAACACCTACCCCGGCGCAGCGGTGG ATGTGCCGTCGCCGCTGTATTCCTTGTCATTTGCGCCTTATCGCTGGACGCAGATGTTCGCCGAACAGGCCGAACTGCAC CGCTACACCGACCATGTAATCGAACGCTTCGGCCTGCGCGATCGGGTGGAACTGGAGGCCAACGTCGAACGCGTCGAATG GGACGACACCGAAAAACGCTGGGCCGTACACACTGGCACCAAAGGCATTTTTTATGCGCAGTTCCTGATCAATGCCACCG GGCCGTTGAGCCAACCGGTTATCCCACACTTCCCCGGTCAGGATCGCTTTCAGGGCAAGACCTTTCATACAAACAATTGG GATCACAGCTACGACTATCACGGTAAACGGGTAGCGATTGTCGGCAGCGGTGCCAGTGCGGCTCAGGTGATTCCGGCGAT TGCACCGAAGGTCGCCCATTTGCATGTGTTTCAGCGCACCGCGCATTGGGTGCTGCCCCGGGCCGACCGTACATTCGGGC GGTTCCAGCGCTGGTTGCTGGGTCTGAAACCGGCCTACAAACTGCTGCGCTGGATGATCTACTGGCAATTCGAAACCCGG GTCATCGCCTTCAAATACTCGAAACCGGCGATTCACATGGTGCAGCGACACGCCCTGAAGTTTCTCAAGCGCCAGGTAAC TGACCCCGAACTGCGGAAAAAACTCACACCGGACTTCACCATCGGCTGCAAACGGGTATTGGTCTCCAGTACCTACTATC CGGCGCTGACCCGGCCCAACGTCACGCTGCACAGCCGCGAACAGGGCATCGCCAGCCTCGACGAAACCGGCATCATCACC ACGGACGGCCAGCACATCGACGTCGATCTGATCGTCTGGTCGACCGGTTACGACGCCACCGACGGCGTGATTTCCTACCC GGTCAGCGGAAAAAACGCCGTGCAACTGCGCGACGTGTGGGCGCAATACCCGCGCGCCTACCTCGGCACCAGCCTGCCGG ACTTTCCCAACCTGTTTATCGTCACCGGGCCGAACACCGGCATCGGGCATACGTCGGCGCTGTTCATCATCGAATCGCAG ATGAACTACATCCTCGACTGCATCCGCACCGTGCAGGCCAAAGGTCTGCGCAGCATCGAAGTTCGCCCCGAAGCAGAACG TACCTACACTCAGATGATTCACCGGGAAATGGAACGCACGGTCTGGAAAACCGGCGGCTGCCACAGTTGGTATCAAAGCA GGAGCGGTCATGTGATCGCGATGTTTCCCGGCTTCAGTTTCAGCTATCACCGGTTGACCCGGGCGCTGAAACCGGCCGAC CACATTCTGTCTTGA
Upstream 100 bases:
>100_bases CAGCGGGCCGAATACCCCGTCATCAGCACCACACGGCAGGCAAATGATTGGCTATACATGAAAGGATGAAAATGGAAAAA AGACTCTAAGAAGGAGGCCC
Downstream 100 bases:
>100_bases ACAAGGAAGACCCACGATGCTTTTGTTGTTTGTCGCCCTCGCGGTTTTCGTGGCCTGGAGCTGGTTGAGTTACCCGGCGG TCGGCCACTGGCTCTACGAT
Product: flavin-containing monooxygenase FMO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MQTYQVLIIGSGFGGQCAAVNLLKAGIDDFRLLERRDFFGGTWCQNTYPGAAVDVPSPLYSLSFAPYRWTQMFAEQAELH RYTDHVIERFGLRDRVELEANVERVEWDDTEKRWAVHTGTKGIFYAQFLINATGPLSQPVIPHFPGQDRFQGKTFHTNNW DHSYDYHGKRVAIVGSGASAAQVIPAIAPKVAHLHVFQRTAHWVLPRADRTFGRFQRWLLGLKPAYKLLRWMIYWQFETR VIAFKYSKPAIHMVQRHALKFLKRQVTDPELRKKLTPDFTIGCKRVLVSSTYYPALTRPNVTLHSREQGIASLDETGIIT TDGQHIDVDLIVWSTGYDATDGVISYPVSGKNAVQLRDVWAQYPRAYLGTSLPDFPNLFIVTGPNTGIGHTSALFIIESQ MNYILDCIRTVQAKGLRSIEVRPEAERTYTQMIHREMERTVWKTGGCHSWYQSRSGHVIAMFPGFSFSYHRLTRALKPAD HILS
Sequences:
>Translated_484_residues MQTYQVLIIGSGFGGQCAAVNLLKAGIDDFRLLERRDFFGGTWCQNTYPGAAVDVPSPLYSLSFAPYRWTQMFAEQAELH RYTDHVIERFGLRDRVELEANVERVEWDDTEKRWAVHTGTKGIFYAQFLINATGPLSQPVIPHFPGQDRFQGKTFHTNNW DHSYDYHGKRVAIVGSGASAAQVIPAIAPKVAHLHVFQRTAHWVLPRADRTFGRFQRWLLGLKPAYKLLRWMIYWQFETR VIAFKYSKPAIHMVQRHALKFLKRQVTDPELRKKLTPDFTIGCKRVLVSSTYYPALTRPNVTLHSREQGIASLDETGIIT TDGQHIDVDLIVWSTGYDATDGVISYPVSGKNAVQLRDVWAQYPRAYLGTSLPDFPNLFIVTGPNTGIGHTSALFIIESQ MNYILDCIRTVQAKGLRSIEVRPEAERTYTQMIHREMERTVWKTGGCHSWYQSRSGHVIAMFPGFSFSYHRLTRALKPAD HILS >Mature_484_residues MQTYQVLIIGSGFGGQCAAVNLLKAGIDDFRLLERRDFFGGTWCQNTYPGAAVDVPSPLYSLSFAPYRWTQMFAEQAELH RYTDHVIERFGLRDRVELEANVERVEWDDTEKRWAVHTGTKGIFYAQFLINATGPLSQPVIPHFPGQDRFQGKTFHTNNW DHSYDYHGKRVAIVGSGASAAQVIPAIAPKVAHLHVFQRTAHWVLPRADRTFGRFQRWLLGLKPAYKLLRWMIYWQFETR VIAFKYSKPAIHMVQRHALKFLKRQVTDPELRKKLTPDFTIGCKRVLVSSTYYPALTRPNVTLHSREQGIASLDETGIIT TDGQHIDVDLIVWSTGYDATDGVISYPVSGKNAVQLRDVWAQYPRAYLGTSLPDFPNLFIVTGPNTGIGHTSALFIIESQ MNYILDCIRTVQAKGLRSIEVRPEAERTYTQMIHREMERTVWKTGGCHSWYQSRSGHVIAMFPGFSFSYHRLTRALKPAD HILS
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503757, Length=381, Percent_Identity=21.7847769028871, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561948, Length=359, Percent_Identity=22.0055710306407, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25145785, Length=366, Percent_Identity=21.5846994535519, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI19921694, Length=201, Percent_Identity=27.8606965174129, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 55281; Mature: 55281
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTYQVLIIGSGFGGQCAAVNLLKAGIDDFRLLERRDFFGGTWCQNTYPGAAVDVPSPLY CCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCHH SLSFAPYRWTQMFAEQAELHRYTDHVIERFGLRDRVELEANVERVEWDDTEKRWAVHTGT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCC KGIFYAQFLINATGPLSQPVIPHFPGQDRFQGKTFHTNNWDHSYDYHGKRVAIVGSGASA CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCH AQVIPAIAPKVAHLHVFQRTAHWVLPRADRTFGRFQRWLLGLKPAYKLLRWMIYWQFETR HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEE VIAFKYSKPAIHMVQRHALKFLKRQVTDPELRKKLTPDFTIGCKRVLVSSTYYPALTRPN EEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC VTLHSREQGIASLDETGIITTDGQHIDVDLIVWSTGYDATDGVISYPVSGKNAVQLRDVW CEEECCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHH AQYPRAYLGTSLPDFPNLFIVTGPNTGIGHTSALFIIESQMNYILDCIRTVQAKGLRSIE HHCCHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEE VRPEAERTYTQMIHREMERTVWKTGGCHSWYQSRSGHVIAMFPGFSFSYHRLTRALKPAD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHH HILS HHCC >Mature Secondary Structure MQTYQVLIIGSGFGGQCAAVNLLKAGIDDFRLLERRDFFGGTWCQNTYPGAAVDVPSPLY CCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCHH SLSFAPYRWTQMFAEQAELHRYTDHVIERFGLRDRVELEANVERVEWDDTEKRWAVHTGT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCC KGIFYAQFLINATGPLSQPVIPHFPGQDRFQGKTFHTNNWDHSYDYHGKRVAIVGSGASA CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCH AQVIPAIAPKVAHLHVFQRTAHWVLPRADRTFGRFQRWLLGLKPAYKLLRWMIYWQFETR HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEEEEE VIAFKYSKPAIHMVQRHALKFLKRQVTDPELRKKLTPDFTIGCKRVLVSSTYYPALTRPN EEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC VTLHSREQGIASLDETGIITTDGQHIDVDLIVWSTGYDATDGVISYPVSGKNAVQLRDVW CEEECCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHH AQYPRAYLGTSLPDFPNLFIVTGPNTGIGHTSALFIIESQMNYILDCIRTVQAKGLRSIE HHCCHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEE VRPEAERTYTQMIHREMERTVWKTGGCHSWYQSRSGHVIAMFPGFSFSYHRLTRALKPAD CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHH HILS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]