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The map label for this gene is ydcJ [H]

Identifier: 77458273

GI number: 77458273

Start: 2331826

End: 2333202

Strand: Reverse

Name: ydcJ [H]

Synonym: Pfl01_2046

Alternate gene names: 77458273

Gene position: 2333202-2331826 (Counterclockwise)

Preceding gene: 77458274

Following gene: 77458272

Centisome position: 36.24

GC content: 61.44

Gene sequence:

>1377_bases
ATGACCGTGCAGCCTTTCGTCAGCCCCGACCTGATCCGCCAACGCTTCTCCAAAGCGATGTCCGACATGTACCGCGAAGA
AGTGCCGCTGTACGGCGCGTTGATGGAATTGGTGGAACAGACCAACCGCGACGTGCTGGCACGCGAACCGCAGATCGCCA
GCCAACTGCACAGCACTGGCGAAATCGAACGGCTGGACATGGAGCGCCACGGTGCCATCCGCGTCGGCACCGCCGCAGAG
CTCGCCACCCTCGCCCGCCTGTTTGCGGTGATGGGCATGCAACCGGTGGGCTATTACGACCTGACCCCTGCCGGGGTGCC
GGTGCACTCCACGGCGTTCCGGGCGGTGCATGAAGATGCGCTGCAGGTCAGTCCGTTCCGGGTGTTCACTTCGTTGCTGC
GACTGGAATTGATTGAAGACCCCGAGCTGCGGGCCTTTGCTGAATCGGTGCTGGATAAGCGTTCGATCTTTACGCCATCG
GCGCTAAGGTTGATCGAACAGGCCGAATCGGCTGGCGGTCTGAATGAATCCGAGGCCGGGGAATTTGTCCTGCAAGCGCT
GGAGACTTTTCGCTGGCACCACAGCGCCACCGTCACTGCCGCGCAATACCAGACGCTCAGCGCCCAGCATCGCTTGATCG
CCGATGTCGTGGCCTTCAAGGGCCCGCACATCAACCACCTGACCCCGCGCACGCTGGACATCGACATCGTCCAGGCACAG
ATGCCGCTGCACGGCATCACGCCCAAAGCGGTGATCGAAGGCCCGCCGCGCCGGCAGCATCCGATCCTGTTGCGTCAGAC
CAGTTTCAAGGCGCTGGACGAGCCGATCGCCTTCACCGACCAGACACAAACCCGCGGCAGCCACAGCGCCCGCTTCGGCG
AAATCGAACAACGTGGCGCAGCGCTGACCCCCAAGGGCCGTGCGTTGTACGACCGCCTGCTGAACGCGGCGCGCGATGAA
CTGGGCGATTTCCCCAACGAAGCCAACGCCTCACGTTACAACGCGCTGATGACCCAGCATTTCAGCGAATTCCCTGACAG
CCTCGAGGGCATGCGCGAGCAGGAACTGGCGTACTTCCGTTATTTCCTGACAGGCAAAGTAGGTCGTCCCGCAGATGTAA
CGCTGCAAGGATTATTACGCGACGGCTATGTGAAAGCCGAACCGCTGGTGTACGAAGATTTCCTGCCAGTCAGTGCGGCA
GGGATTTTTCAGTCGAACCTGGGGGACGCGGCGCAGGCGCACTATGGCGAACATTCCAATCGACAGGCGTTCGAGTTGGC
CTTGGGGCGTTCGACCATTGATGAGTTGGGCCTGTATGCCGAAACCCAGCAACGTTCGATTGAGGAATGCCTCACTGCAA
TTGCCCACTCCGCGTGA

Upstream 100 bases:

>100_bases
TTGGCAGAATGAAGTCCGTAGGATTCTTCGTTTGCCCGCGTCGGCGAAGGCTGCGATCTTTTCCAACACCTTTTACGTGA
CCGTGCCAGGAATTTTTTTC

Downstream 100 bases:

>100_bases
ACAGCGGCGATTGGCCATACTGCGCAAGAAGTTGCGCACTTGTTTCGTAAAAATGCTCACCAATTCCGCTGGAGGCCATG
TGTTTGAAGGCCTCCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MTVQPFVSPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRDVLAREPQIASQLHSTGEIERLDMERHGAIRVGTAAE
LATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEDALQVSPFRVFTSLLRLELIEDPELRAFAESVLDKRSIFTPS
ALRLIEQAESAGGLNESEAGEFVLQALETFRWHHSATVTAAQYQTLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAQ
MPLHGITPKAVIEGPPRRQHPILLRQTSFKALDEPIAFTDQTQTRGSHSARFGEIEQRGAALTPKGRALYDRLLNAARDE
LGDFPNEANASRYNALMTQHFSEFPDSLEGMREQELAYFRYFLTGKVGRPADVTLQGLLRDGYVKAEPLVYEDFLPVSAA
GIFQSNLGDAAQAHYGEHSNRQAFELALGRSTIDELGLYAETQQRSIEECLTAIAHSA

Sequences:

>Translated_458_residues
MTVQPFVSPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRDVLAREPQIASQLHSTGEIERLDMERHGAIRVGTAAE
LATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEDALQVSPFRVFTSLLRLELIEDPELRAFAESVLDKRSIFTPS
ALRLIEQAESAGGLNESEAGEFVLQALETFRWHHSATVTAAQYQTLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAQ
MPLHGITPKAVIEGPPRRQHPILLRQTSFKALDEPIAFTDQTQTRGSHSARFGEIEQRGAALTPKGRALYDRLLNAARDE
LGDFPNEANASRYNALMTQHFSEFPDSLEGMREQELAYFRYFLTGKVGRPADVTLQGLLRDGYVKAEPLVYEDFLPVSAA
GIFQSNLGDAAQAHYGEHSNRQAFELALGRSTIDELGLYAETQQRSIEECLTAIAHSA
>Mature_457_residues
TVQPFVSPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRDVLAREPQIASQLHSTGEIERLDMERHGAIRVGTAAEL
ATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEDALQVSPFRVFTSLLRLELIEDPELRAFAESVLDKRSIFTPSA
LRLIEQAESAGGLNESEAGEFVLQALETFRWHHSATVTAAQYQTLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAQM
PLHGITPKAVIEGPPRRQHPILLRQTSFKALDEPIAFTDQTQTRGSHSARFGEIEQRGAALTPKGRALYDRLLNAARDEL
GDFPNEANASRYNALMTQHFSEFPDSLEGMREQELAYFRYFLTGKVGRPADVTLQGLLRDGYVKAEPLVYEDFLPVSAAG
IFQSNLGDAAQAHYGEHSNRQAFELALGRSTIDELGLYAETQQRSIEECLTAIAHSA

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=450, Percent_Identity=56.4444444444444, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 50950; Mature: 50819

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQPFVSPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRDVLAREPQIASQLHSTG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCC
EIERLDMERHGAIRVGTAAELATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEDA
CCEEHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
LQVSPFRVFTSLLRLELIEDPELRAFAESVLDKRSIFTPSALRLIEQAESAGGLNESEAG
HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
EFVLQALETFRWHHSATVTAAQYQTLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAQ
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC
MPLHGITPKAVIEGPPRRQHPILLRQTSFKALDEPIAFTDQTQTRGSHSARFGEIEQRGA
CCCCCCCCHHHCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHCCC
ALTPKGRALYDRLLNAARDELGDFPNEANASRYNALMTQHFSEFPDSLEGMREQELAYFR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YFLTGKVGRPADVTLQGLLRDGYVKAEPLVYEDFLPVSAAGIFQSNLGDAAQAHYGEHSN
HHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCC
RQAFELALGRSTIDELGLYAETQQRSIEECLTAIAHSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVQPFVSPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRDVLAREPQIASQLHSTG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCC
EIERLDMERHGAIRVGTAAELATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEDA
CCEEHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHH
LQVSPFRVFTSLLRLELIEDPELRAFAESVLDKRSIFTPSALRLIEQAESAGGLNESEAG
HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
EFVLQALETFRWHHSATVTAAQYQTLSAQHRLIADVVAFKGPHINHLTPRTLDIDIVQAQ
HHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC
MPLHGITPKAVIEGPPRRQHPILLRQTSFKALDEPIAFTDQTQTRGSHSARFGEIEQRGA
CCCCCCCCHHHCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHCCC
ALTPKGRALYDRLLNAARDELGDFPNEANASRYNALMTQHFSEFPDSLEGMREQELAYFR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YFLTGKVGRPADVTLQGLLRDGYVKAEPLVYEDFLPVSAAGIFQSNLGDAAQAHYGEHSN
HHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCC
RQAFELALGRSTIDELGLYAETQQRSIEECLTAIAHSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]