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The map label for this gene is hcpA [H]

Identifier: 77458272

GI number: 77458272

Start: 2330996

End: 2331511

Strand: Reverse

Name: hcpA [H]

Synonym: Pfl01_2045

Alternate gene names: 77458272

Gene position: 2331511-2330996 (Counterclockwise)

Preceding gene: 77458273

Following gene: 77458271

Centisome position: 36.21

GC content: 56.59

Gene sequence:

>516_bases
ATGGCAACACCAGCGTACATGTCGGTTACCGGCGAAAAACAAGGCCTGATCACTGCCGGCGCTTTCACCGCCGACTCCGT
TGGCAACACCTACCAGGAAGGTCACGAAGACCAGGTCATGGTTCAGGCGTTCAGCCACGACGTGATCATCCCGCGTGACC
CGCAATCCGGTCAGCCAACCGGTCAGCGCGTTCACAAGCCAGTGATCATCACCAAGGTCTACGACAAGGCTTCGCCTCTG
CTGCAAGCCGCTCTGACCTCCGGCGAGCGCATGAGCGAAATCGTTATCCAGTGGTACCGCACTTCGGCTCAAGGTACCCA
AGAGCACTACTACACCACCAAACTGGAAGACGCGATCATCGTCGCCATCAACAACAAAATGCACAACTGCCAGGATCCAG
GCAACTCGCACTTCACCCACCTGGAAGAAGTGCAGTTCACCTACCGCAAAATCACCTGGACCCACGAAGTATCCGGTACT
TCGGGTTCCGATGACTGGCGTGCTCCAGTCGTTTAA

Upstream 100 bases:

>100_bases
GACGTGGCAAAAGCTGGCACGCTCCTTGATAACAGTCAGGCACCCACCGGGCGATTTCGCCTCCCGGGCACCCTAACTTT
ATCCGCAAGGAGCACCTCCC

Downstream 100 bases:

>100_bases
TTACGGCTGATCGTTTCAAGCATCGGCCAGCTCTGCTGGTCGATGTTGTTTACGCCCCTCCAGAATTTCGCGTACGTTGA
CCCGCTTTGCGGGCGTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPTGQRVHKPVIITKVYDKASPL
LQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAIIVAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGT
SGSDDWRAPVV

Sequences:

>Translated_171_residues
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPTGQRVHKPVIITKVYDKASPL
LQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAIIVAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGT
SGSDDWRAPVV
>Mature_170_residues
ATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPTGQRVHKPVIITKVYDKASPLL
QAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAIIVAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGTS
GSDDWRAPVV

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

Organism=Escherichia coli, GI1789850, Length=163, Percent_Identity=27.6073619631902, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 19022; Mature: 18891

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPT
CCCCCEEEECCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCCCC
GQRVHKPVIITKVYDKASPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII
CHHHCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHEEEEECCCEEE
VAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRAPVV
EEECCCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPT
CCCCEEEECCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCCCC
GQRVHKPVIITKVYDKASPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII
CHHHCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHEEEEECCCEEE
VAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRAPVV
EEECCCCCCCCCCCCCCCCHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]